RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 CAMKK1Q8N5S9 505 aa14.1□□□□□ -0.15
TPM3-211ENST00000368531 GANCQ8TET4 914 aa14.1□□□□□ -0.15
TPM3-211ENST00000368531 MAIP1Q8WWC4 291 aa14.1□□□□□ -0.15
TPM3-211ENST00000368531 PRCCQ92733 491 aaPredicted RBP14.1□□□□□ -0.15
TPM3-211ENST00000368531 SIPA1Q96FS4 1042 aa14.1□□□□□ -0.15
TPM3-211ENST00000368531 ZNF419Q96HQ0 510 aaPredicted RBP14.1□□□□□ -0.15
TPM3-211ENST00000368531 PSKH2Q96QS6 385 aa14.1□□□□□ -0.15
TPM3-211ENST00000368531 HEPHQ9BQS7 1158 aa14.1□□□□□ -0.15
TPM3-211ENST00000368531 AP1M1Q9BXS5 423 aa14.1□□□□□ -0.15
TPM3-211ENST00000368531 RSPH9Q9H1X1 276 aaPredicted RBP14.1□□□□□ -0.15
TPM3-211ENST00000368531 SCUBE2Q9NQ36 999 aa14.1□□□□□ -0.15
TPM3-211ENST00000368531 PRMT8Q9NR22 394 aaPredicted RBP14.1□□□□□ -0.15
TPM3-211ENST00000368531 IL36AQ9UHA7 158 aa14.1□□□□□ -0.15
TPM3-211ENST00000368531 SARDHQ9UL12 918 aa14.1□□□□□ -0.15
TPM3-211ENST00000368531 EML5Q05BV3 1969 aa14.1□□□□□ -0.15
TPM3-211ENST00000368531 F5H423 210 aaPredicted RBP14.09□□□□□ -0.15
TPM3-211ENST00000368531 PGRMC1O00264 195 aaKnown RBP14.09□□□□□ -0.15
TPM3-211ENST00000368531 PLK4O00444 970 aa14.09□□□□□ -0.15
TPM3-211ENST00000368531 KPNA3O00505 521 aaPredicted RBP14.09□□□□□ -0.15
TPM3-211ENST00000368531 MID1O15344 667 aa14.09□□□□□ -0.15
TPM3-211ENST00000368531 GALR2O43603 387 aaPredicted RBP14.09□□□□□ -0.15
TPM3-211ENST00000368531 LEFTY1O75610 366 aa14.09□□□□□ -0.15
TPM3-211ENST00000368531 POP4O95707 220 aaKnown RBP14.09□□□□□ -0.15
TPM3-211ENST00000368531 CTSLP07711 333 aa14.09□□□□□ -0.15
TPM3-211ENST00000368531 ACADMP11310 421 aa14.09□□□□□ -0.15
TPM3-211ENST00000368531 PTPN3P26045 913 aa14.09□□□□□ -0.15
TPM3-211ENST00000368531 SLC8A1P32418 973 aa14.09□□□□□ -0.15
TPM3-211ENST00000368531 METAP1P53582 386 aa14.09□□□□□ -0.15
TPM3-211ENST00000368531 NRLP54845 237 aa14.09□□□□□ -0.15
TPM3-211ENST00000368531 IFI35P80217 286 aaPredicted RBP14.09□□□□□ -0.15
TPM3-211ENST00000368531 DSC2Q02487 901 aa14.09□□□□□ -0.15
TPM3-211ENST00000368531 RAD51Q06609 339 aa14.09□□□□□ -0.15
TPM3-211ENST00000368531 ZNF33AQ06730 810 aa14.09□□□□□ -0.15
TPM3-211ENST00000368531 CST6Q15828 149 aa14.09□□□□□ -0.15
TPM3-211ENST00000368531 DSG4Q86SJ6 1040 aa14.09□□□□□ -0.15
TPM3-211ENST00000368531 TEX26Q8N6G2 289 aa14.09□□□□□ -0.15
TPM3-211ENST00000368531 PAF1Q8N7H5 531 aa14.09□□□□□ -0.15
TPM3-211ENST00000368531 CNTD1Q8N815 330 aa14.09□□□□□ -0.15
TPM3-211ENST00000368531 SLC35B2Q8TB61 432 aa14.09□□□□□ -0.15
TPM3-211ENST00000368531 PIP4K2CQ8TBX8 421 aa14.09□□□□□ -0.15
TPM3-211ENST00000368531 HTR3CQ8WXA8 447 aa14.09□□□□□ -0.15
TPM3-211ENST00000368531 RLN3Q8WXF3 142 aa14.09□□□□□ -0.15
TPM3-211ENST00000368531 IL12RB2Q99665 862 aa14.09□□□□□ -0.15
TPM3-211ENST00000368531 SEMA3CQ99985 751 aa14.09□□□□□ -0.15
TPM3-211ENST00000368531 TMEM121Q9BTD3 319 aa14.09□□□□□ -0.15
TPM3-211ENST00000368531 CD93Q9NPY3 652 aa14.09□□□□□ -0.15
TPM3-211ENST00000368531 KLHL8Q9P2G9 620 aaPredicted RBP14.09□□□□□ -0.15
TPM3-211ENST00000368531 BDP1A6H8Y1 2624 aa14.08□□□□□ -0.16
TPM3-211ENST00000368531 AXIN1O15169 862 aa14.08□□□□□ -0.16
TPM3-211ENST00000368531 MTSS1O43312 755 aa14.08□□□□□ -0.16
TPM3-211ENST00000368531 LIASO43766 372 aa14.08□□□□□ -0.16
TPM3-211ENST00000368531 PAPSS2O95340 614 aaPredicted RBP14.08□□□□□ -0.16
TPM3-211ENST00000368531 PIGNO95427 931 aa14.08□□□□□ -0.16
TPM3-211ENST00000368531 DNTTP04053 509 aa14.08□□□□□ -0.16
TPM3-211ENST00000368531 UGT2B4P06133 528 aa14.08□□□□□ -0.16
TPM3-211ENST00000368531 PRLRP16471 622 aa14.08□□□□□ -0.16
TPM3-211ENST00000368531 HSPA9P38646 679 aaKnown RBP14.08□□□□□ -0.16
TPM3-211ENST00000368531 WASHC5Q12768 1159 aa14.08□□□□□ -0.16
TPM3-211ENST00000368531 TEX44Q53QW1 395 aa14.08□□□□□ -0.16
TPM3-211ENST00000368531 PID1Q7Z2X4 250 aa14.08□□□□□ -0.16
TPM3-211ENST00000368531 FAM124AQ86V42 546 aa14.08□□□□□ -0.16
TPM3-211ENST00000368531 PLPP6Q8IY26 295 aa14.08□□□□□ -0.16
TPM3-211ENST00000368531 FAM71DQ8N9W8 422 aa14.08□□□□□ -0.16
TPM3-211ENST00000368531 ACTRT1Q8TDG2 376 aa14.08□□□□□ -0.16
TPM3-211ENST00000368531 FATE1Q969F0 183 aa14.08□□□□□ -0.16
TPM3-211ENST00000368531 NAP1L3Q99457 506 aaPredicted RBP14.08□□□□□ -0.16
TPM3-211ENST00000368531 FERMT1Q9BQL6 677 aa14.08□□□□□ -0.16
TPM3-211ENST00000368531 MGME1Q9BQP7 344 aa14.08□□□□□ -0.16
TPM3-211ENST00000368531 FBRSQ9HAH7 460 aa14.08□□□□□ -0.16
TPM3-211ENST00000368531 EBF1Q9UH73 591 aa14.08□□□□□ -0.16
TPM3-211ENST00000368531 FBXO4Q9UKT5 387 aa14.08□□□□□ -0.16
TPM3-211ENST00000368531 PPM1HQ9ULR3 514 aa14.08□□□□□ -0.16
TPM3-211ENST00000368531 ZNF148Q9UQR1 794 aa14.08□□□□□ -0.16
TPM3-211ENST00000368531 WASF2Q9Y6W5 498 aa14.08□□□□□ -0.16
TPM3-211ENST00000368531 A0A1W2PP55 124 aa14.07□□□□□ -0.16
TPM3-211ENST00000368531 BCLAF3A2AJT9 711 aaKnown RBP14.07□□□□□ -0.16
TPM3-211ENST00000368531 C1QTNF3-AMACRE9PGA6 284 aa14.07□□□□□ -0.16
TPM3-211ENST00000368531 CES2O00748 559 aa14.07□□□□□ -0.16
TPM3-211ENST00000368531 ALOX15BO15296 676 aa14.07□□□□□ -0.16
TPM3-211ENST00000368531 PRNPP04156 253 aa14.07□□□□□ -0.16
TPM3-211ENST00000368531 SP9P0CG40 484 aa14.07□□□□□ -0.16
TPM3-211ENST00000368531 TDGF1P13385 188 aa14.07□□□□□ -0.16
TPM3-211ENST00000368531 KCNJ1P48048 391 aa14.07□□□□□ -0.16
TPM3-211ENST00000368531 NSUN2Q08J23 767 aaKnown RBP eCLIP14.07□□□□□ -0.16
TPM3-211ENST00000368531 NIPAL4Q0D2K0 466 aa14.07□□□□□ -0.16
TPM3-211ENST00000368531 BYSLQ13895 437 aaKnown RBP14.07□□□□□ -0.16
TPM3-211ENST00000368531 CCNG2Q16589 344 aa14.07□□□□□ -0.16
TPM3-211ENST00000368531 KCTD19Q17RG1 926 aaPredicted RBP14.07□□□□□ -0.16
TPM3-211ENST00000368531 FAM46CQ5VWP2 391 aa14.07□□□□□ -0.16
TPM3-211ENST00000368531 GDPD4Q6W3E5 623 aa14.07□□□□□ -0.16
TPM3-211ENST00000368531 RASSF3Q86WH2 238 aa14.07□□□□□ -0.16
TPM3-211ENST00000368531 CAMK1DQ8IU85 385 aa14.07□□□□□ -0.16
TPM3-211ENST00000368531 CREG2Q8IUH2 290 aa14.07□□□□□ -0.16
TPM3-211ENST00000368531 ZNF567Q8N184 647 aa14.07□□□□□ -0.16
TPM3-211ENST00000368531 HDDC3Q8N4P3 179 aa14.07□□□□□ -0.16
TPM3-211ENST00000368531 FRMD1Q8N878 549 aa14.07□□□□□ -0.16
TPM3-211ENST00000368531 PRELID2Q8N945 189 aa14.07□□□□□ -0.16
TPM3-211ENST00000368531 CCDC110Q8TBZ0 833 aa14.07□□□□□ -0.16
TPM3-211ENST00000368531 MAGOHBQ96A72 148 aaKnown RBP14.07□□□□□ -0.16
TPM3-211ENST00000368531 ARRDC3Q96B67 414 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms