RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 RAD21L1Q9H4I0 556 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 ABCB10Q9NRK6 738 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 ERGIC3Q9Y282 383 aa12.86□□□□□ -0.35
VAMP1-201ENST00000361716 TAF4O00268 1085 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 VWA5AO00534 786 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 MFN2O95140 757 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 NAT1P18440 290 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 CYP2F1P24903 491 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 RPL14P50914 215 aaKnown RBP12.85□□□□□ -0.35
VAMP1-201ENST00000361716 NDST1P52848 882 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 PLK1P53350 603 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 TAP1Q03518 808 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 NOMO1Q15155 1222 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 KIF19Q2TAC6 998 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 GOLGA7BQ2TAP0 167 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 NBPF12Q5TAG4 269 aaPredicted RBP12.85□□□□□ -0.35
VAMP1-201ENST00000361716 FAM183BPQ6ZVS7 135 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 VASH1Q7L8A9 365 aaPredicted RBP12.85□□□□□ -0.35
VAMP1-201ENST00000361716 PLD5Q8N7P1 536 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 RNF38Q9H0F5 515 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 SMARCAD1Q9H4L7 1026 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 DHX33Q9H6R0 707 aaKnown RBP12.85□□□□□ -0.35
VAMP1-201ENST00000361716 SPC25Q9HBM1 224 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 ZDHHC2Q9UIJ5 367 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 NFASCO94856 1347 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 MATN1P21941 496 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 NAMPTP43490 491 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 FUT11Q495W5 492 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 DEPDC1Q5TB30 811 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 ATF7IP2Q5U623 682 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 OR9I1Q8NGQ6 314 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 CHPT1Q8WUD6 406 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 NRBF2Q96F24 287 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 AGAP2Q99490 1192 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 ST6GALNAC4Q9H4F1 302 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 NMRAL1Q9HBL8 299 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 VTA1Q9NP79 307 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 TMPRSS4Q9NRS4 437 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 GNPTGQ9UJJ9 305 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 PADI4Q9UM07 663 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 OAZ3Q9UMX2 235 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 PCDHB12Q9Y5F1 795 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 PCDHA11Q9Y5I1 949 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 SCN9AQ15858 1988 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.85□□□□□ -0.35
VAMP1-201ENST00000361716 WNT10BO00744 389 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 TNPO2O14787 897 aaKnown RBP12.85□□□□□ -0.35
VAMP1-201ENST00000361716 AURKAO14965 403 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 OGTO15294 1046 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 HSPA8P11142 646 aaKnown RBP12.85□□□□□ -0.35
VAMP1-201ENST00000361716 ELK4P28324 431 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 TXNL4AP83876 142 aaKnown RBP12.85□□□□□ -0.35
VAMP1-201ENST00000361716 FPGSQ05932 587 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 XYLT1Q86Y38 959 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 TNIP2Q8NFZ5 429 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 PSMA8Q8TAA3 256 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 HM13Q8TCT9 377 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 HPDLQ96IR7 371 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 SIGLEC10Q96LC7 697 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 ZNF597Q96LX8 424 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 GLT1D1Q96MS3 346 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 RNF157Q96PX1 679 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 SNRNP25Q9BV90 132 aaKnown RBP12.85□□□□□ -0.35
VAMP1-201ENST00000361716 SLC2A11Q9BYW1 496 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 PORCNQ9H237 461 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.85□□□□□ -0.35
VAMP1-201ENST00000361716 COPG1Q9Y678 874 aaKnown RBP12.85□□□□□ -0.35
VAMP1-201ENST00000361716 ZNF646O15015 1829 aaPredicted RBP12.85□□□□□ -0.35
VAMP1-201ENST00000361716 KIF13BQ9NQT8 1826 aa12.85□□□□□ -0.35
VAMP1-201ENST00000361716 ADAMTSL1Q8N6G6 1762 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 EI24O14681 340 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 INPP4BO15327 924 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 PAPSS1O43252 624 aaPredicted RBP12.84□□□□□ -0.35
VAMP1-201ENST00000361716 HCRTO43612 131 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 XYLBO75191 536 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 BMP10O95393 424 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 PARNO95453 639 aaKnown RBP12.84□□□□□ -0.35
VAMP1-201ENST00000361716 GSRP00390 522 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 PGK2P07205 417 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 TSHRP16473 764 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 ARL4AP40617 200 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 GRM5P41594 1212 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 RABGGTBP53611 331 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 IL1RL1Q01638 556 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 DPYSQ14117 519 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 ZNF354CQ86Y25 554 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 BRSK2Q8IWQ3 736 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 DHRSXQ8N5I4 330 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 ACDQ96AP0 544 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 SEPT3Q9UH03 358 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 PCDHGC3Q9UN70 934 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 FAM159BA6NKW6 160 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 EIF3FO00303 357 aaPredicted RBP12.84□□□□□ -0.35
VAMP1-201ENST00000361716 FAM189A1O60320 539 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 ENO2P09104 434 aaPredicted RBP12.84□□□□□ -0.35
VAMP1-201ENST00000361716 IL10P22301 178 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 MRPS15P82914 257 aaKnown RBP12.84□□□□□ -0.35
VAMP1-201ENST00000361716 LAMTOR4Q0VGL1 99 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 MERTKQ12866 999 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 SLC13A2Q13183 592 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms