RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 MED8Q96G25 268 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 CAPN10Q9HC96 672 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 PRPF19Q9UMS4 504 aaKnown RBP13.86□□□□□ -0.19
VCP-201ENST00000358901 STXBP5LQ9Y2K9 1186 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 DYRK1BQ9Y463 629 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 MTF2Q9Y483 593 aaPredicted RBP13.86□□□□□ -0.19
VCP-201ENST00000358901 IFNA14P01570 189 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 URODP06132 367 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 FOXN2P32314 431 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 DDR2Q16832 855 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 KHDC1Q4VXA5 237 aaKnown RBP13.86□□□□□ -0.19
VCP-201ENST00000358901 RBM44Q6ZP01 1051 aaKnown RBP13.86□□□□□ -0.19
VCP-201ENST00000358901 CDYL2Q8N8U2 506 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 MAGEC3Q8TD91 643 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 C18orf25Q96B23 403 aaPredicted RBP13.86□□□□□ -0.19
VCP-201ENST00000358901 RHOJQ9H4E5 214 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 POLR1BQ9H9Y6 1135 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 TRPV2Q9Y5S1 764 aa13.86□□□□□ -0.19
VCP-201ENST00000358901 PRR23D1E9PI22 279 aaPredicted RBP13.85□□□□□ -0.19
VCP-201ENST00000358901 HOXA2O43364 376 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 PRR23D2P0DMB1 279 aaPredicted RBP13.85□□□□□ -0.19
VCP-201ENST00000358901 AKR1A1P14550 325 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 WNT3AP56704 352 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 SLC25A52Q3SY17 297 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 STXBP5Q5T5C0 1151 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 STRADAQ7RTN6 431 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 SETD9Q8NE22 299 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 BTN2A2Q8WVV5 523 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 NPAS2Q99743 824 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 C6orf62Q9GZU0 229 aaPredicted RBP13.85□□□□□ -0.19
VCP-201ENST00000358901 DHX33Q9H6R0 707 aaKnown RBP13.85□□□□□ -0.19
VCP-201ENST00000358901 XPNPEP1Q9NQW7 623 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 ARL15Q9NXU5 204 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 TPRKBQ9Y3C4 175 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 RGS14O43566 566 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 TKTP29401 623 aaKnown RBP13.85□□□□□ -0.19
VCP-201ENST00000358901 GRM5P41594 1212 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 PSMD7P51665 324 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 VWA5B1Q5TIE3 1220 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 MCOLN3Q8TDD5 553 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 GOLGA2P5Q9HBQ8 144 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 TRPC4Q9UBN4 977 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 STK25O00506 426 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 WDR4P57081 412 aaKnown RBP13.85□□□□□ -0.19
VCP-201ENST00000358901 ILF2Q12905 390 aaKnown RBP13.85□□□□□ -0.19
VCP-201ENST00000358901 POTEHQ6S545 545 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 SPESP1Q6UW49 350 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 C16orf59Q7L2K0 433 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 ZNF467Q7Z7K2 595 aaPredicted RBP13.85□□□□□ -0.19
VCP-201ENST00000358901 ACTRT2Q8TDY3 377 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 NDRG1Q92597 394 aaKnown RBP13.85□□□□□ -0.19
VCP-201ENST00000358901 TMEM159Q96B96 161 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 APOL4Q9BPW4 351 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 SLC25A13Q9UJS0 675 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 CDH9Q9ULB4 789 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 COQ4Q9Y3A0 265 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 NTRK1P04629 796 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 ALDH9A1P49189 494 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 SLC5A9Q2M3M2 681 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 RNF220Q5VTB9 566 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 PMF1Q6P1K2 205 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 HERC6Q8IVU3 1022 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 GPC2Q8N158 579 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 NKAPQ8N5F7 415 aaKnown RBP13.85□□□□□ -0.19
VCP-201ENST00000358901 FAM45AQ8TCE6 357 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 SEPT8Q92599 483 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 EXOC2Q96KP1 924 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 C7orf26Q96N11 449 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 CNGB3Q9NQW8 809 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 STARD7Q9NQZ5 370 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 CACNA2D2Q9NY47 1150 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 WRAP73Q9P2S5 460 aaPredicted RBP13.85□□□□□ -0.19
VCP-201ENST00000358901 LNPEPQ9UIQ6 1025 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 COMMD3-BMI1R4GMX3 469 aa13.85□□□□□ -0.19
VCP-201ENST00000358901 FGFR1P11362 822 aa13.84□□□□□ -0.19
VCP-201ENST00000358901 UNGP13051 313 aaPredicted RBP13.84□□□□□ -0.19
VCP-201ENST00000358901 HK2P52789 917 aa13.84□□□□□ -0.19
VCP-201ENST00000358901 ACSM2AQ08AH3 577 aa13.84□□□□□ -0.19
VCP-201ENST00000358901 NCF4Q15080 339 aa13.84□□□□□ -0.19
VCP-201ENST00000358901 CYP1B1Q16678 543 aa13.84□□□□□ -0.19
VCP-201ENST00000358901 ARHGAP15Q53QZ3 475 aa13.84□□□□□ -0.19
VCP-201ENST00000358901 ACSM2BQ68CK6 577 aa13.84□□□□□ -0.19
VCP-201ENST00000358901 VSTM1Q6UX27 236 aa13.84□□□□□ -0.19
VCP-201ENST00000358901 C8orf59Q8N0T1 100 aaPredicted RBP13.84□□□□□ -0.19
VCP-201ENST00000358901 SLC4A11Q8NBS3 891 aa13.84□□□□□ -0.19
VCP-201ENST00000358901 LPPQ93052 612 aa13.84□□□□□ -0.19
VCP-201ENST00000358901 TADA1Q96BN2 335 aa13.84□□□□□ -0.19
VCP-201ENST00000358901 MTFMTQ96DP5 389 aaKnown RBP13.84□□□□□ -0.19
VCP-201ENST00000358901 DUSP16Q9BY84 665 aa13.84□□□□□ -0.19
VCP-201ENST00000358901 DUSP12Q9UNI6 340 aa13.84□□□□□ -0.19
VCP-201ENST00000358901 VWA7Q9Y334 891 aa13.84□□□□□ -0.19
VCP-201ENST00000358901 SNX8Q9Y5X2 465 aa13.84□□□□□ -0.19
VCP-201ENST00000358901 FFAR3O14843 346 aa13.84□□□□□ -0.19
VCP-201ENST00000358901 PLSCR1O15162 318 aa13.84□□□□□ -0.19
VCP-201ENST00000358901 GPR42O15529 346 aa13.84□□□□□ -0.19
VCP-201ENST00000358901 EPHB3P54753 998 aa13.84□□□□□ -0.19
VCP-201ENST00000358901 BCL2L1Q07817 233 aa13.84□□□□□ -0.19
VCP-201ENST00000358901 SREBF2Q12772 1141 aa13.84□□□□□ -0.19
VCP-201ENST00000358901 PRKG2Q13237 762 aa13.84□□□□□ -0.19
VCP-201ENST00000358901 KRR1Q13601 381 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms