RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 PREX1Q8TCU6 1659 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 CNTNAP4Q9C0A0 1308 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 H7C4K7 107 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 PGRMC2O15173 223 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 SMNDC1O75940 238 aaKnown RBP eCLIP6.64□□□□□ -1.35
VPS13B-202ENST00000357162 ALOX12P18054 663 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 SHROOM1Q2M3G4 852 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-202ENST00000357162 RNF149Q8NC42 400 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 REXO4Q9GZR2 422 aaKnown RBP6.64□□□□□ -1.35
VPS13B-202ENST00000357162 STUB1Q9UNE7 303 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 ANGPT4Q9Y264 503 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 RIMBP2O15034 1052 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 ZW10O43264 779 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 HSMCR30P0CW71 290 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 ZNF7P17097 686 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-202ENST00000357162 SUZ12Q15022 739 aaKnown RBP6.64□□□□□ -1.35
VPS13B-202ENST00000357162 RFT1Q96AA3 541 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 NINJ2Q9NZG7 142 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 TRIM17Q9Y577 477 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 FMN2Q9NZ56 1722 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 A0A0G2JPF8 293 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 HNRNPCL3B7ZW38 293 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 HNRNPCL4P0DMR1 293 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 S100A3P33764 101 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 NPTX2P47972 431 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 EPHA10Q5JZY3 1008 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 RBM48Q5RL73 367 aaKnown RBP6.64□□□□□ -1.35
VPS13B-202ENST00000357162 FBXO33Q7Z6M2 555 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 PIGWQ7Z7B1 504 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 RASAL3Q86YV0 1011 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 CDC26Q8NHZ8 85 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 PYDC1Q8WXC3 89 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 AURKBQ96GD4 344 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-202ENST00000357162 ALOX15P16050 662 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-202ENST00000357162 PCID2Q5JVF3 399 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 PPM1LQ5SGD2 360 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 PSMD11O00231 422 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 PDPK1O15530 556 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 ZNF45Q02386 682 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 MOGQ16653 247 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 LSM12Q3MHD2 195 aaKnown RBP6.64□□□□□ -1.35
VPS13B-202ENST00000357162 LHFPL3Q86UP9 236 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 FNDC5Q8NAU1 212 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 MCFD2Q8NI22 146 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 TSEN34Q9BSV6 310 aaKnown RBP6.64□□□□□ -1.35
VPS13B-202ENST00000357162 CDH19Q9H159 772 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 LRFN2Q9ULH4 789 aa6.64□□□□□ -1.35
VPS13B-202ENST00000357162 C10orf71Q711Q0 1435 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 ALDH1A1P00352 501 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 GLRA2P23416 452 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 CPA2P48052 419 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 CCDC107Q8WV48 283 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 DYNLL2Q96FJ2 89 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 FNIP2Q9P278 1114 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 CLTCQ00610 1675 aaKnown RBP6.63□□□□□ -1.35
VPS13B-202ENST00000357162 FAM172BPA6NC97 362 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 ZNF682O95780 498 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 ELK3P41970 407 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 GRIA2P42262 883 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 GPR15P49685 360 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 SKIV2LQ15477 1246 aaKnown RBP6.63□□□□□ -1.35
VPS13B-202ENST00000357162 ANKS1BQ7Z6G8 1248 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 BRSK2Q8IWQ3 736 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 CLYBLQ8N0X4 340 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 HDHD2Q9H0R4 259 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 USP20Q9Y2K6 914 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 GSTT2BP0CG30 244 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 AOC1P19801 751 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 HNF4AP41235 474 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 ALDH9A1P49189 494 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 STARP49675 285 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 POLD3Q15054 466 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-202ENST00000357162 STK32CQ86UX6 486 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 PHF10Q8WUB8 498 aaKnown RBP6.63□□□□□ -1.35
VPS13B-202ENST00000357162 CPA5Q8WXQ8 436 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 ADI1Q9BV57 179 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 SNX7Q9UNH6 387 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 PCDHA11Q9Y5I1 949 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 ERCC6L2Q5T890 1561 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 RGS10O43665 173 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 SLC16A2P36021 539 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 KCNJ1P48048 391 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 MAMLD1Q13495 774 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 HKDC1Q2TB90 917 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 ZC3H12AQ5D1E8 599 aaKnown RBP6.63□□□□□ -1.35
VPS13B-202ENST00000357162 PRELID2Q8N945 189 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 CRLS1Q9UJA2 301 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 CENPBD1B2RD01 187 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 ZBTB22O15209 634 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 ULK1O75385 1050 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 RPL10AP62906 217 aaKnown RBP6.63□□□□□ -1.35
VPS13B-202ENST00000357162 FAM13CQ8NE31 585 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 SH3RF3Q8TEJ3 882 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-202ENST00000357162 SLC44A1Q8WWI5 657 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 ACSBG1Q96GR2 724 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 DPY30Q9C005 99 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 SLC6A15Q9H2J7 730 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 HS6ST1O60243 411 aa6.63□□□□□ -1.35
VPS13B-202ENST00000357162 CHI3L1P36222 383 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-202ENST00000357162 HYIQ5T013 277 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms