RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 APOL2Q9BQE5 337 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 RPP25Q9BUL9 199 aaKnown RBP18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 CINPQ9BW66 212 aaPredicted RBP18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 POLR1EQ9GZS1 481 aaKnown RBP18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 LRRC40Q9H9A6 602 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 THG1LQ9NWX6 298 aaKnown RBP18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 TEX264Q9Y6I9 313 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 MYLKQ15746 1914 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 KIAA1549LQ6ZVL6 1849 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 GRXCR2A6NFK2 248 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 GOLGA6L10A6NI86 522 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 PSMD3O43242 534 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 PMPCBO75439 489 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 NFATC1O95644 943 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 CISD3P0C7P0 127 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 MYZAPP0CAP1 466 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 PABPC1P11940 636 aaKnown RBP18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 TSHRP16473 764 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 CR2P20023 1033 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 ADRA1AP35348 466 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 ELK3P41970 407 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 CTSOP43234 321 aaPredicted RBP18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 SKOR1P84550 965 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 PDGFRLQ15198 375 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 CCDC38Q502W7 563 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 Q7L0L9 218 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 PYROXD1Q8WU10 500 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 MYLIPQ8WY64 445 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 LRRC39Q96DD0 335 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 MRGPRX2Q96LB1 330 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 SIGLEC10Q96LC7 697 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 SLC2A11Q9BYW1 496 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 ROPN1BQ9BZX4 212 aaPredicted RBP18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 ECT2Q9H8V3 914 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 ROPN1Q9HAT0 212 aaPredicted RBP18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 LRRC4CQ9HCJ2 640 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 CASS4Q9NQ75 786 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 LHX3Q9UBR4 397 aa18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.41■□□□□ 0.54
SMARCD3-202ENST00000356800 SMAD6O43541 496 aaKnown RBP18.4■□□□□ 0.54
SMARCD3-202ENST00000356800 RNF40O75150 1001 aa18.4■□□□□ 0.54
SMARCD3-202ENST00000356800 TCEA3O75764 348 aa18.4■□□□□ 0.54
SMARCD3-202ENST00000356800 AGTP01019 485 aa18.4■□□□□ 0.54
SMARCD3-202ENST00000356800 DNAJC21Q5F1R6 531 aaKnown RBP18.4■□□□□ 0.54
SMARCD3-202ENST00000356800 TMEM215Q68D42 235 aa18.4■□□□□ 0.54
SMARCD3-202ENST00000356800 RETSATQ6NUM9 610 aa18.4■□□□□ 0.54
SMARCD3-202ENST00000356800 ADIPOR2Q86V24 386 aa18.4■□□□□ 0.54
SMARCD3-202ENST00000356800 ETFBKMTQ8IXQ9 262 aa18.4■□□□□ 0.54
SMARCD3-202ENST00000356800 BBS5Q8N3I7 341 aa18.4■□□□□ 0.54
SMARCD3-202ENST00000356800 ZNF557Q8N988 423 aaPredicted RBP18.4■□□□□ 0.54
SMARCD3-202ENST00000356800 FBXO36Q8NEA4 188 aa18.4■□□□□ 0.54
SMARCD3-202ENST00000356800 IPMKQ8NFU5 416 aa18.4■□□□□ 0.54
SMARCD3-202ENST00000356800 UHMK1Q8TAS1 419 aaKnown RBP18.4■□□□□ 0.54
SMARCD3-202ENST00000356800 EXOC2Q96KP1 924 aa18.4■□□□□ 0.54
SMARCD3-202ENST00000356800 PPP1R2P1Q96PQ5 205 aa18.4■□□□□ 0.54
SMARCD3-202ENST00000356800 TMBIM4Q9HC24 238 aa18.4■□□□□ 0.54
SMARCD3-202ENST00000356800 EPS15L1Q9UBC2 864 aa18.4■□□□□ 0.54
SMARCD3-202ENST00000356800 CHMP2BQ9UQN3 213 aa18.4■□□□□ 0.54
SMARCD3-202ENST00000356800 FCF1Q9Y324 198 aaKnown RBP18.4■□□□□ 0.54
SMARCD3-202ENST00000356800 GOLGA6CA6NDK9 693 aa18.39■□□□□ 0.53
SMARCD3-202ENST00000356800 GOLGA6DP0CG33 693 aa18.39■□□□□ 0.53
SMARCD3-202ENST00000356800 PSMC3P17980 439 aa18.39■□□□□ 0.53
SMARCD3-202ENST00000356800 SP100P23497 879 aaPredicted RBP18.39■□□□□ 0.53
SMARCD3-202ENST00000356800 SERPINH1P50454 418 aaKnown RBP18.39■□□□□ 0.53
SMARCD3-202ENST00000356800 WNT3AP56704 352 aa18.39■□□□□ 0.53
SMARCD3-202ENST00000356800 GPX6P59796 221 aa18.39■□□□□ 0.53
SMARCD3-202ENST00000356800 MPP3Q13368 585 aa18.39■□□□□ 0.53
SMARCD3-202ENST00000356800 CCDC85BQ15834 202 aaPredicted RBP18.39■□□□□ 0.53
SMARCD3-202ENST00000356800 GEN1Q17RS7 908 aa18.39■□□□□ 0.53
SMARCD3-202ENST00000356800 DENND5AQ6IQ26 1287 aa18.39■□□□□ 0.53
SMARCD3-202ENST00000356800 RNF135Q8IUD6 432 aa18.39■□□□□ 0.53
SMARCD3-202ENST00000356800 ATP11CQ8NB49 1132 aa18.39■□□□□ 0.53
SMARCD3-202ENST00000356800 ARL8AQ96BM9 186 aa18.39■□□□□ 0.53
SMARCD3-202ENST00000356800 CDX2Q99626 313 aaPredicted RBP18.39■□□□□ 0.53
SMARCD3-202ENST00000356800 TBL1YQ9BQ87 522 aa18.39■□□□□ 0.53
SMARCD3-202ENST00000356800 FICDQ9BVA6 458 aa18.39■□□□□ 0.53
SMARCD3-202ENST00000356800 NOD2Q9HC29 1040 aa18.39■□□□□ 0.53
SMARCD3-202ENST00000356800 VPS45Q9NRW7 570 aa18.39■□□□□ 0.53
SMARCD3-202ENST00000356800 GOLGA6AQ9NYA3 693 aa18.39■□□□□ 0.53
SMARCD3-202ENST00000356800 UNC80Q8N2C7 3258 aa18.39■□□□□ 0.53
SMARCD3-202ENST00000356800 PRUNE2Q8WUY3 3088 aa18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 A0A087WUV0 522 aaPredicted RBP18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 TULP3O75386 442 aa18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 ECI2O75521 394 aa18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 MGAT1P26572 445 aa18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 STK19P49842 368 aaPredicted RBP18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 SESN2P58004 480 aaPredicted RBP18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 CRADDP78560 199 aa18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 MESP2Q0VG99 397 aa18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 DMC1Q14565 340 aa18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 TTMPQ5BVD1 217 aa18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 NAPEPLDQ6IQ20 393 aa18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 RANBP10Q6VN20 620 aa18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 RPL10LQ96L21 214 aaKnown RBP18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 PLAC1Q9HBJ0 212 aa18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 CXorf51AA0A1B0GTR3 108 aa18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 RRP9O43818 475 aaKnown RBP18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 ZNF821O75541 412 aaPredicted RBP18.38■□□□□ 0.53
SMARCD3-202ENST00000356800 KCNA5P22460 613 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms