RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 DNAJC28Q9NX36 388 aa10.85□□□□□ -0.67
CAPN3-204ENST00000356316 CLCA2Q9UQC9 943 aa10.85□□□□□ -0.67
CAPN3-204ENST00000356316 FCF1Q9Y324 198 aaKnown RBP10.85□□□□□ -0.67
CAPN3-204ENST00000356316 WASF2Q9Y6W5 498 aa10.85□□□□□ -0.67
CAPN3-204ENST00000356316 FAM208BQ5VWN6 2430 aa10.85□□□□□ -0.67
CAPN3-204ENST00000356316 TDRD6O60522 2096 aaKnown RBP10.85□□□□□ -0.67
CAPN3-204ENST00000356316 ZSCAN5CA6NGD5 496 aaPredicted RBP10.84□□□□□ -0.67
CAPN3-204ENST00000356316 C2CD4BA6NLJ0 364 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 GOLGA6L22H0YM25 854 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 H3BM21 787 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 BUB1O43683 1085 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 KDELR3O43731 214 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 AP1G1O43747 822 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 CALB1P05937 261 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 HOXB3P14651 431 aaPredicted RBP10.84□□□□□ -0.67
CAPN3-204ENST00000356316 CHRNB2P17787 502 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 GPD1P21695 349 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 RFC1P35251 1148 aaPredicted RBP10.84□□□□□ -0.67
CAPN3-204ENST00000356316 RABIFP47224 123 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 KLK7P49862 253 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 JAM2P57087 298 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 FOXK1P85037 733 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 FMO1Q01740 532 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 MYLK3Q32MK0 819 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 PROX2Q3B8N5 592 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 TMEM259Q4ZIN3 620 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 ZNF805Q5CZA5 627 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 EFHC2Q5JST6 749 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 CDKAL1Q5VV42 579 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 SCYL2Q6P3W7 929 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 TMC6Q7Z403 805 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 ABI3BPQ7Z7G0 1075 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 TTC7BQ86TV6 843 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 OR4C6Q8NH72 309 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 JOSD2Q8TAC2 188 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 BAP1Q92560 729 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 GBP4Q96PP9 640 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 DUSP23Q9BVJ7 150 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 LMBRD1Q9NUN5 540 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 ANO10Q9NW15 660 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 TMEM248Q9NWD8 314 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 ZNF212Q9UDV6 495 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 ZFR2Q9UPR6 939 aaKnown RBP10.84□□□□□ -0.67
CAPN3-204ENST00000356316 FADS3Q9Y5Q0 445 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 GOLGA4Q13439 2230 aaKnown RBP10.84□□□□□ -0.67
CAPN3-204ENST00000356316 MYLKQ15746 1914 aa10.84□□□□□ -0.67
CAPN3-204ENST00000356316 PKD1L2Q7Z442 2459 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 A0A087WV48 116 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 IGLON5A6NGN9 336 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 SIGLEC16A6NMB1 481 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 C16orf96A6NNT2 1141 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 FAM72CH0Y354 149 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 RNF103O00237 685 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 TRIM38O00635 465 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 SCAMP1O15126 338 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 PIAS2O75928 621 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 LRIG2O94898 1065 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 GSRP00390 522 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 UNGP13051 313 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-204ENST00000356316 XPAP23025 273 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-204ENST00000356316 EPHB2P29323 1055 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 ACTN2P35609 894 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 COPB1P53618 953 aaKnown RBP10.83□□□□□ -0.68
CAPN3-204ENST00000356316 CLDN6P56747 220 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 COL9A2Q14055 689 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-204ENST00000356316 PTK2BQ14289 1009 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 RTP5Q14D33 572 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 CLEC16AQ2KHT3 1053 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 ZNF542PQ5EBM4 170 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 FAM72AQ5TYM5 149 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 FAM72DQ6L9T8 149 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 WDR59Q6PJI9 974 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 GDPD4Q6W3E5 623 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 LEKR1Q6ZMV7 388 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 GCNT7Q6ZNI0 430 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 FAM72BQ86X60 149 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 PHF13Q86YI8 300 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-204ENST00000356316 CACTIN-AS1Q8N1I8 211 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 OR2AP1Q8NGE2 309 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 OR6K2Q8NGY2 324 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 CASKIN2Q8WXE0 1202 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 CENPIQ92674 756 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-204ENST00000356316 BMFQ96LC9 184 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 LENG8Q96PV6 779 aaPredicted RBP10.83□□□□□ -0.68
CAPN3-204ENST00000356316 C1QTNF7Q9BXJ2 289 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 CATSPERBQ9H7T0 1116 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 NDFIP2Q9NV92 336 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 UCKL1Q9NWZ5 548 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 DONSONQ9NYP3 566 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 NLGN3Q9NZ94 848 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 NCKIPSDQ9NZQ3 722 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 TRPM6Q9BX84 2022 aa10.83□□□□□ -0.68
CAPN3-204ENST00000356316 SPTY2D1-AS1A0A0U1RR47 76 aa10.82□□□□□ -0.68
CAPN3-204ENST00000356316 POM121BA6NF01 834 aa10.82□□□□□ -0.68
CAPN3-204ENST00000356316 CREB3O43889 395 aa10.82□□□□□ -0.68
CAPN3-204ENST00000356316 GJB6O95452 261 aa10.82□□□□□ -0.68
CAPN3-204ENST00000356316 IGSF6O95976 241 aa10.82□□□□□ -0.68
CAPN3-204ENST00000356316 MT-CO3P00414 261 aa10.82□□□□□ -0.68
CAPN3-204ENST00000356316 UGT2B4P06133 528 aa10.82□□□□□ -0.68
CAPN3-204ENST00000356316 CKMT1AP12532 417 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms