RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 SIPA1Q96FS4 1042 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 RBM41Q96IZ5 413 aaKnown RBP4.05□□□□□ -1.76
CNOT4-202ENST00000356162 PDLIM2Q96JY6 352 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 ZNF599Q96NL3 588 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 DESI2Q9BSY9 194 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 SPON2Q9BUD6 331 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 KLC2Q9H0B6 622 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 PCED1AQ9H1Q7 454 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 RSPH9Q9H1X1 276 aaPredicted RBP4.05□□□□□ -1.76
CNOT4-202ENST00000356162 PABPC3Q9H361 631 aaKnown RBP4.05□□□□□ -1.76
CNOT4-202ENST00000356162 PDFQ9HBH1 243 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 ENAMQ9NRM1 1142 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 KLHL11Q9NVR0 708 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 UBA2Q9UBT2 640 aaPredicted RBP4.05□□□□□ -1.76
CNOT4-202ENST00000356162 DNAI1Q9UI46 699 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 RAB23Q9ULC3 237 aa4.05□□□□□ -1.76
CNOT4-202ENST00000356162 ATXN7L1Q9ULK2 861 aaPredicted RBP4.05□□□□□ -1.76
CNOT4-202ENST00000356162 SMG5Q9UPR3 1016 aaKnown RBP4.05□□□□□ -1.76
CNOT4-202ENST00000356162 LRRD1A4D1F6 860 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 GRID2IPA4D2P6 1211 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 CBX4O00257 560 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 KRT86O43790 486 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 MFSD11O43934 449 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 BNIP3LO60238 219 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 PRAMEF11O60813 436 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 TMCC1O94876 653 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 EPN2O95208 641 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 CCDC175P0C221 793 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 ACADMP11310 421 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 ZFXP17010 805 aaPredicted RBP4.04□□□□□ -1.76
CNOT4-202ENST00000356162 AMPD1P23109 780 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 GLDCP23378 1020 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 KDELR1P24390 212 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 OXTRP30559 389 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 CTNNA1P35221 906 aaKnown RBP4.04□□□□□ -1.76
CNOT4-202ENST00000356162 PTPN7P35236 360 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 PLA2G5P39877 138 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 DPP6P42658 865 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 EPHA4P54764 986 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 RPS14P62263 151 aaKnown RBP4.04□□□□□ -1.76
CNOT4-202ENST00000356162 IL10RBQ08334 325 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 GALNT2Q10471 571 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 PPP2R5EQ16537 467 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 TAZQ16635 292 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 INO80DQ53TQ3 878 aaPredicted RBP4.04□□□□□ -1.76
CNOT4-202ENST00000356162 ANKRD20A8PQ5CZ79 823 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 ZFYVE27Q5T4F4 411 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 FAM46CQ5VWP2 391 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 NCBP2-AS2Q69YL0 99 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 LAIR1Q6GTX8 287 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 USP30Q70CQ3 517 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 CEP68Q76N32 757 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 DAAM2Q86T65 1068 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 KBTBD6Q86V97 674 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 ZNF354CQ86Y25 554 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 LRRC49Q8IUZ0 686 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 STK40Q8N2I9 435 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 ATPAF2Q8N5M1 289 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 RNF10Q8N5U6 811 aaKnown RBP4.04□□□□□ -1.76
CNOT4-202ENST00000356162 ZNF366Q8N895 744 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 LRRC57Q8N9N7 239 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 ATP11CQ8NB49 1132 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.04□□□□□ -1.76
CNOT4-202ENST00000356162 KCTD6Q8NC69 237 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 ABHD17AQ96GS6 310 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 LOXL4Q96JB6 756 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 RPL10LQ96L21 214 aaKnown RBP4.04□□□□□ -1.76
CNOT4-202ENST00000356162 MRGPRX1Q96LB2 322 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 ZNF830Q96NB3 372 aaPredicted RBP4.04□□□□□ -1.76
CNOT4-202ENST00000356162 TPSD1Q9BZJ3 242 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 SLC39A8Q9C0K1 460 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 LACRTQ9GZZ8 138 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 SP110Q9HB58 689 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 FAM86C1Q9NVL1 165 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 ZDHHC3Q9NYG2 299 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 SCHIP1Q9P0W5 487 aaPredicted RBP4.04□□□□□ -1.76
CNOT4-202ENST00000356162 CACNA1IQ9P0X4 2223 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 RAPGEFL1Q9UHV5 662 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 SALL4Q9UJQ4 1053 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 TFR2Q9UP52 801 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.04□□□□□ -1.76
CNOT4-202ENST00000356162 R4GN57 208 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 CUL9Q8IWT3 2517 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 CEP192Q8TEP8 1941 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 IGHV1OR15-9A0A0B4J2B8 117 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 CCDC66A2RUB6 948 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 C3orf70A6NLC5 250 aaPredicted RBP4.04□□□□□ -1.76
CNOT4-202ENST00000356162 MIF4GDA9UHW6 222 aaKnown RBP4.04□□□□□ -1.76
CNOT4-202ENST00000356162 WASH3PC4AMC7 463 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 APOL1O14791 398 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 SLC7A4O43246 635 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 BUB1O43683 1085 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 RHOBTB1O94844 696 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 CD160O95971 181 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 IGSF6O95976 241 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 DNTTP04053 509 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 PRNPP04156 253 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 CD48P09326 243 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 C5AR1P21730 350 aa4.04□□□□□ -1.76
CNOT4-202ENST00000356162 CD6P30203 668 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms