RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 PPARGC1AQ9UBK2 798 aaKnown RBP13.63□□□□□ -0.23
UBA3-201ENST00000349511 IKBKGQ9Y6K9 419 aa13.63□□□□□ -0.23
UBA3-201ENST00000349511 H0Y3Z8 333 aa13.62□□□□□ -0.23
UBA3-201ENST00000349511 OPHN1O60890 802 aa13.62□□□□□ -0.23
UBA3-201ENST00000349511 ENTPD5O75356 428 aa13.62□□□□□ -0.23
UBA3-201ENST00000349511 HAUS5O94927 633 aa13.62□□□□□ -0.23
UBA3-201ENST00000349511 INHBAP08476 426 aa13.62□□□□□ -0.23
UBA3-201ENST00000349511 PYGBP11216 843 aa13.62□□□□□ -0.23
UBA3-201ENST00000349511 BGNP21810 368 aa13.62□□□□□ -0.23
UBA3-201ENST00000349511 ACVRL1P37023 503 aa13.62□□□□□ -0.23
UBA3-201ENST00000349511 PPP3CCP48454 512 aa13.62□□□□□ -0.23
UBA3-201ENST00000349511 CAND1Q86VP6 1230 aaKnown RBP13.62□□□□□ -0.23
UBA3-201ENST00000349511 LZTR1Q8N653 840 aa13.62□□□□□ -0.23
UBA3-201ENST00000349511 CNTD1Q8N815 330 aa13.62□□□□□ -0.23
UBA3-201ENST00000349511 OR52K2Q8NGK3 314 aa13.62□□□□□ -0.23
UBA3-201ENST00000349511 ZSCAN18Q8TBC5 510 aaPredicted RBP13.62□□□□□ -0.23
UBA3-201ENST00000349511 ADAMTS19Q8TE59 1207 aa13.62□□□□□ -0.23
UBA3-201ENST00000349511 PLD4Q96BZ4 506 aa13.62□□□□□ -0.23
UBA3-201ENST00000349511 PTCD3Q96EY7 689 aaKnown RBP13.62□□□□□ -0.23
UBA3-201ENST00000349511 PRICKLE1Q96MT3 831 aaPredicted RBP13.62□□□□□ -0.23
UBA3-201ENST00000349511 TMEM120AQ9BXJ8 343 aa13.62□□□□□ -0.23
UBA3-201ENST00000349511 CADM1Q9BY67 442 aaKnown RBP13.62□□□□□ -0.23
UBA3-201ENST00000349511 ASAH2Q9NR71 780 aa13.62□□□□□ -0.23
UBA3-201ENST00000349511 IPO11Q9UI26 975 aaKnown RBP13.62□□□□□ -0.23
UBA3-201ENST00000349511 MAFFQ9ULX9 164 aa13.62□□□□□ -0.23
UBA3-201ENST00000349511 RPL26L1Q9UNX3 145 aaKnown RBP13.62□□□□□ -0.23
UBA3-201ENST00000349511 LRRC42Q9Y546 428 aa13.62□□□□□ -0.23
UBA3-201ENST00000349511 ASB3Q9Y575 518 aa13.62□□□□□ -0.23
UBA3-201ENST00000349511 RAD54BQ9Y620 910 aa13.62□□□□□ -0.23
UBA3-201ENST00000349511 A0A0D9SEW6 157 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 DRGXA6NNA5 263 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 CLASP2O75122 1294 aaKnown RBP13.61□□□□□ -0.23
UBA3-201ENST00000349511 NEFHP12036 1026 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 NFKB1P19838 968 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 SERPINB3P29508 390 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 HTR7P34969 479 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 CRADDP78560 199 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 CDK16Q00536 496 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 SEMA5AQ13591 1074 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 PRPF39Q86UA1 669 aaKnown RBP13.61□□□□□ -0.23
UBA3-201ENST00000349511 MPP5Q8N3R9 675 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 PABPC5Q96DU9 382 aaKnown RBP13.61□□□□□ -0.23
UBA3-201ENST00000349511 PRR11Q96HE9 360 aaPredicted RBP13.61□□□□□ -0.23
UBA3-201ENST00000349511 GORASP1Q9BQQ3 440 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 BTBD10Q9BSF8 475 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 NKX2-4Q9H2Z4 354 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 DNMT3BQ9UBC3 853 aaKnown RBP13.61□□□□□ -0.23
UBA3-201ENST00000349511 MTO1Q9Y2Z2 717 aaKnown RBP13.61□□□□□ -0.23
UBA3-201ENST00000349511 ACTL7AQ9Y615 435 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 DENND4CQ5VZ89 1909 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 PRRC2BQ5JSZ5 2229 aaKnown RBP13.61□□□□□ -0.23
UBA3-201ENST00000349511 BPTFQ12830 3046 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 ARHGAP42A6NI28 874 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 WASH4PA8MWX3 477 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 RFXAPO00287 272 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 CCDC22O60826 627 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 DNAJC6O75061 913 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 TGDSO95455 350 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 CCNCP24863 283 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 ABL2P42684 1182 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 UBE3AQ05086 875 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 POLD3Q15054 466 aaPredicted RBP13.61□□□□□ -0.23
UBA3-201ENST00000349511 ZNF534Q76KX8 674 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 UMODL1-AS1Q8N2C9 162 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 SPATA22Q8NHS9 363 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 GDPD5Q8WTR4 605 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 SKA1Q96BD8 255 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 CFAP36Q96G28 342 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 NSL1Q96IY1 281 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 APOL2Q9BQE5 337 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 TUBB6Q9BUF5 446 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 SLC46A2Q9BY10 475 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 FBXO6Q9NRD1 293 aaPredicted RBP13.61□□□□□ -0.23
UBA3-201ENST00000349511 ZNF212Q9UDV6 495 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 HCFC2Q9Y5Z7 792 aa13.61□□□□□ -0.23
UBA3-201ENST00000349511 TTC24A2A3L6 582 aaPredicted RBP13.6□□□□□ -0.23
UBA3-201ENST00000349511 RAMP2O60895 175 aa13.6□□□□□ -0.23
UBA3-201ENST00000349511 SKAP2O75563 359 aaPredicted RBP13.6□□□□□ -0.23
UBA3-201ENST00000349511 SPAG6O75602 509 aa13.6□□□□□ -0.23
UBA3-201ENST00000349511 SMNDC1O75940 238 aaKnown RBP eCLIP13.6□□□□□ -0.23
UBA3-201ENST00000349511 FAM155BO75949 473 aa13.6□□□□□ -0.23
UBA3-201ENST00000349511 MT-CYBP00156 380 aaPredicted RBP13.6□□□□□ -0.23
UBA3-201ENST00000349511 C1QAP02745 245 aa13.6□□□□□ -0.23
UBA3-201ENST00000349511 RB1P06400 928 aa13.6□□□□□ -0.23
UBA3-201ENST00000349511 DLDP09622 509 aaKnown RBP13.6□□□□□ -0.23
UBA3-201ENST00000349511 FDFT1P37268 417 aa13.6□□□□□ -0.23
UBA3-201ENST00000349511 ETFBP38117 255 aa13.6□□□□□ -0.23
UBA3-201ENST00000349511 SLC5A9Q2M3M2 681 aa13.6□□□□□ -0.23
UBA3-201ENST00000349511 ADGRF1Q5T601 910 aa13.6□□□□□ -0.23
UBA3-201ENST00000349511 AFMIDQ63HM1 303 aa13.6□□□□□ -0.23
UBA3-201ENST00000349511 KDELC2Q7Z4H8 507 aa13.6□□□□□ -0.23
UBA3-201ENST00000349511 C12orf76Q8N812 135 aaPredicted RBP13.6□□□□□ -0.23
UBA3-201ENST00000349511 TEKT5Q96M29 485 aa13.6□□□□□ -0.23
UBA3-201ENST00000349511 FAM167BQ9BTA0 163 aa13.6□□□□□ -0.23
UBA3-201ENST00000349511 BRD8Q9H0E9 1235 aa13.6□□□□□ -0.23
UBA3-201ENST00000349511 RBM22Q9NW64 420 aaKnown RBP eCLIP13.6□□□□□ -0.239e-7■■■□□ 19.2
UBA3-201ENST00000349511 CCL26Q9Y258 94 aa13.6□□□□□ -0.23
UBA3-201ENST00000349511 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.6□□□□□ -0.23
UBA3-201ENST00000349511 H3BNC9 293 aa13.6□□□□□ -0.23
UBA3-201ENST00000349511 MATN3O15232 486 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms