RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 C5orf60A6NFR6 353 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 UPK3BL1B0FP48 263 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 UPK3BL2E5RIL1 263 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 FAM72CH0Y354 149 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 FGF10O15520 208 aaPredicted RBP13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 HYAL3O43820 417 aaPredicted RBP13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 GCATO75600 419 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 STK10O94804 968 aaKnown RBP13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 NFATC1O95644 943 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 CKMP06732 381 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 ABHD2P08910 425 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 CHRM1P11229 460 aaPredicted RBP13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 P2RY2P41231 377 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 ARL4CP56559 192 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 BASP1P80723 227 aaKnown RBP13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 MTA1Q13330 715 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 KCNJ11Q14654 390 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 CRY1Q16526 586 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 HIF1AQ16665 826 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 UAP1L1Q3KQV9 507 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 KRT71Q3SY84 523 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 C2orf27AQ580R0 203 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 TRIM61Q5EBN2 209 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 FAM72AQ5TYM5 149 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 FAM72DQ6L9T8 149 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 PIP4P1Q86T03 277 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 FAM72BQ86X60 149 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 ZNF276Q8N554 614 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 ARL14EPQ8N8R7 260 aaPredicted RBP13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 PDZD8Q8NEN9 1154 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 OR2W6PQ8NHA6 318 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 FAM76AQ8TAV0 307 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 SH3RF2Q8TEC5 729 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 PIGKQ92643 395 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 ARL8AQ96BM9 186 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 ROPN1BQ9BZX4 212 aaPredicted RBP13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 LINC00597Q9H2U6 94 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 SLC32A1Q9H598 525 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 ROPN1Q9HAT0 212 aaPredicted RBP13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 SAYSD1Q9NPB0 183 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 OSER1Q9NX31 292 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 NINJ2Q9NZG7 142 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 SFMBT1Q9UHJ3 866 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 ARHGAP26Q9UNA1 814 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 LHX6Q9UPM6 363 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 MFHAS1Q9Y4C4 1052 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 PCDH15Q96QU1 1955 aa13.76□□□□□ -0.21
HERPUD1-202ENST00000344114 FAM221BA6H8Z2 402 aa13.75□□□□□ -0.21
HERPUD1-202ENST00000344114 C2orf78A6NCI8 922 aa13.75□□□□□ -0.21
HERPUD1-202ENST00000344114 LRIG2O94898 1065 aa13.75□□□□□ -0.21
HERPUD1-202ENST00000344114 MAP3K6O95382 1288 aa13.75□□□□□ -0.21
HERPUD1-202ENST00000344114 HNRNPLP14866 589 aaKnown RBP eCLIP13.75□□□□□ -0.21
HERPUD1-202ENST00000344114 MX2P20592 715 aa13.75□□□□□ -0.21
HERPUD1-202ENST00000344114 MAGEA4P43358 317 aa13.75□□□□□ -0.21
HERPUD1-202ENST00000344114 MAGEA6P43360 314 aa13.75□□□□□ -0.21
HERPUD1-202ENST00000344114 SEC13P55735 322 aa13.75□□□□□ -0.21
HERPUD1-202ENST00000344114 MRPS21P82921 87 aaKnown RBP13.75□□□□□ -0.21
HERPUD1-202ENST00000344114 CBLBQ13191 982 aa13.75□□□□□ -0.21
HERPUD1-202ENST00000344114 TRIP4Q15650 581 aaPredicted RBP13.75□□□□□ -0.21
HERPUD1-202ENST00000344114 ACBD5Q5T8D3 534 aaPredicted RBP13.75□□□□□ -0.21
HERPUD1-202ENST00000344114 MANEALQ5VSG8 457 aa13.75□□□□□ -0.21
HERPUD1-202ENST00000344114 PEAR1Q5VY43 1037 aaPredicted RBP13.75□□□□□ -0.21
HERPUD1-202ENST00000344114 KIAA1211LQ6NV74 962 aa13.75□□□□□ -0.21
HERPUD1-202ENST00000344114 TMEM92Q6UXU6 159 aa13.75□□□□□ -0.21
HERPUD1-202ENST00000344114 HTR3CQ8WXA8 447 aa13.75□□□□□ -0.21
HERPUD1-202ENST00000344114 TBC1D31Q96DN5 1066 aa13.75□□□□□ -0.21
HERPUD1-202ENST00000344114 SLC39A13Q96H72 371 aa13.75□□□□□ -0.21
HERPUD1-202ENST00000344114 NUSAP1Q9BXS6 441 aaKnown RBP13.75□□□□□ -0.21
HERPUD1-202ENST00000344114 TMEM74BQ9NUR3 256 aa13.75□□□□□ -0.21
HERPUD1-202ENST00000344114 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.75□□□□□ -0.21
HERPUD1-202ENST00000344114 KLK13Q9UKR3 277 aa13.75□□□□□ -0.21
HERPUD1-202ENST00000344114 ADAMTS20P59510 1910 aa13.75□□□□□ -0.21
HERPUD1-202ENST00000344114 A0A0A0MRY4 1105 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 KCNU1A8MYU2 1149 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 E7ESA3 106 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 MTSS1O43312 755 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 MSI1O43347 362 aaKnown RBP13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 OPHN1O60890 802 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 PAGE1O75459 146 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 TMEM63AO94886 807 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 ACSL3O95573 720 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 APOEP02649 317 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 SHBGP04278 402 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 IVLP07476 585 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 ZDHHC11BP0C7U3 371 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 VAV1P15498 845 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 ENGP17813 658 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 PFKLP17858 780 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 TPSB2P20231 275 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 EPHB2P29323 1055 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 FDFT1P37268 417 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 PGFP49763 221 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 TBX4P57082 545 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 ZXDBP98169 803 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 TAF10Q12962 218 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 TPSAB1Q15661 275 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 HSF5Q4G112 596 aaPredicted RBP13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 ANKRD22Q5VYY1 191 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 SLC23A3Q6PIS1 610 aa13.74□□□□□ -0.21
HERPUD1-202ENST00000344114 ARHGEF18Q6ZSZ5 1173 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms