RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 HORMAD1Q86X24 394 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 ERO1BQ86YB8 467 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 C10orf107Q8IVU9 208 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 AQP12AQ8IXF9 295 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 CPNE9Q8IYJ1 553 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 SLC43A3Q8NBI5 491 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 MCUQ8NE86 351 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 OR2T34Q8NGX1 318 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 OR2T3Q8NH03 318 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 RDH11Q8TC12 318 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 PHF10Q8WUB8 498 aaKnown RBP8.23□□□□□ -1.09
ATG4A-201ENST00000343524 CYGBQ8WWM9 190 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 MAELQ96JY0 434 aaKnown RBP8.23□□□□□ -1.09
ATG4A-201ENST00000343524 BTN2A3PQ96KV6 586 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 HSD17B14Q9BPX1 270 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 AIFM2Q9BRQ8 373 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 WDR11Q9BZH6 1224 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 NAA50Q9GZZ1 169 aaKnown RBP8.23□□□□□ -1.09
ATG4A-201ENST00000343524 CLPBQ9H078 707 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 SNX25Q9H3E2 840 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 ZNF385DQ9H6B1 395 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 NOL11Q9H8H0 719 aaKnown RBP8.23□□□□□ -1.09
ATG4A-201ENST00000343524 FANCEQ9HB96 536 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 TOPORSQ9NS56 1045 aaPredicted RBP8.23□□□□□ -1.09
ATG4A-201ENST00000343524 TBC1D22BQ9NU19 505 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 SMPD3Q9NY59 655 aaPredicted RBP8.23□□□□□ -1.09
ATG4A-201ENST00000343524 MTMR4Q9NYA4 1195 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 KCNN3Q9UGI6 736 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 PGAP2Q9UHJ9 254 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 SARDHQ9UL12 918 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 EMCNQ9ULC0 261 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 SCAF8Q9UPN6 1271 aaKnown RBP8.23□□□□□ -1.09
ATG4A-201ENST00000343524 RAP2CQ9Y3L5 183 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 PCDHA11Q9Y5I1 949 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 ST14Q9Y5Y6 855 aa8.23□□□□□ -1.09
ATG4A-201ENST00000343524 TANC1Q9C0D5 1861 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 SZT2Q5T011 3432 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 ZSCAN5BA6NJL1 495 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 WDR64B1ANS9 1081 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 PLOD2O00469 737 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 AURKAO14965 403 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 PPP1R11O60927 126 aaPredicted RBP8.22□□□□□ -1.09
ATG4A-201ENST00000343524 SRP72O76094 671 aaKnown RBP8.22□□□□□ -1.09
ATG4A-201ENST00000343524 GSRP00390 522 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 CYP3A4P08684 503 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 AKR1B1P15121 316 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 MATN1P21941 496 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 GARTP22102 1010 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 NR4A1P22736 598 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 EEF1B2P24534 225 aaKnown RBP8.22□□□□□ -1.09
ATG4A-201ENST00000343524 PSMA4P25789 261 aaKnown RBP8.22□□□□□ -1.09
ATG4A-201ENST00000343524 ZNF76P36508 570 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 CASP3P42574 277 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 CTAG1AP78358 180 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 MRPS15P82914 257 aaKnown RBP8.22□□□□□ -1.09
ATG4A-201ENST00000343524 SNRNP35Q16560 246 aaKnown RBP8.22□□□□□ -1.09
ATG4A-201ENST00000343524 CDONQ4KMG0 1287 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 SLC9B1Q4ZJI4 515 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 VWA5B1Q5TIE3 1220 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 SUSD4Q5VX71 490 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 ZNF544Q6NX49 715 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 DARS2Q6PI48 645 aaKnown RBP8.22□□□□□ -1.09
ATG4A-201ENST00000343524 CRTC3Q6UUV7 619 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 HACD2Q6Y1H2 254 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 IDO2Q6ZQW0 420 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 C14orf80Q86SX3 495 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 ADAMTSL2Q86TH1 951 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 LINC00523Q86TU6 105 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 SLCO6A1Q86UG4 719 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 DHFR2Q86XF0 187 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 HACE1Q8IYU2 909 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 CBR4Q8N4T8 237 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 SNX19Q92543 992 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 DPF3Q92784 378 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 ZUFSPQ96AP4 578 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 LENG9Q96B70 501 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 CENPNQ96H22 339 aaPredicted RBP8.22□□□□□ -1.09
ATG4A-201ENST00000343524 DACH2Q96NX9 599 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 CDK5RAP1Q96SZ6 601 aaKnown RBP8.22□□□□□ -1.09
ATG4A-201ENST00000343524 COQ7Q99807 217 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 SEZ6LQ9BYH1 1024 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 GLIS2Q9BZE0 524 aaPredicted RBP8.22□□□□□ -1.09
ATG4A-201ENST00000343524 IKZF4Q9H2S9 585 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 MUC13Q9H3R2 512 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 PCIF1Q9H4Z3 704 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 NECTIN3Q9NQS3 549 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 IFT80Q9P2H3 777 aaPredicted RBP8.22□□□□□ -1.09
ATG4A-201ENST00000343524 DNMT3BQ9UBC3 853 aaKnown RBP8.22□□□□□ -1.09
ATG4A-201ENST00000343524 UBA2Q9UBT2 640 aaPredicted RBP8.22□□□□□ -1.09
ATG4A-201ENST00000343524 ADAM28Q9UKQ2 775 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 GAKO14976 1311 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 ADGRA2Q96PE1 1338 aa8.22□□□□□ -1.09
ATG4A-201ENST00000343524 TEX51A0A1B0GUA7 166 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 SNTNA6NMZ2 147 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 CXorf49A8MYA2 514 aaPredicted RBP8.21□□□□□ -1.09
ATG4A-201ENST00000343524 TRIM24O15164 1050 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 MSH4O15457 936 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 TSPAN1O60635 241 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 GAS7O60861 476 aa8.21□□□□□ -1.09
ATG4A-201ENST00000343524 UGT2B11O75310 529 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms