RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 TXLNGQ9NUQ3 528 aa12.96□□□□□ -0.33
LIN54-201ENST00000340417 INTS7Q9NVH2 962 aaKnown RBP12.96□□□□□ -0.33
LIN54-201ENST00000340417 DNAJC28Q9NX36 388 aa12.96□□□□□ -0.33
LIN54-201ENST00000340417 FBXL12Q9NXK8 326 aa12.96□□□□□ -0.33
LIN54-201ENST00000340417 GDAP2Q9NXN4 497 aa12.96□□□□□ -0.33
LIN54-201ENST00000340417 ANKDD1BA6NHY2 528 aa12.96□□□□□ -0.33
LIN54-201ENST00000340417 GCATO75600 419 aa12.96□□□□□ -0.33
LIN54-201ENST00000340417 FLT3P36888 993 aa12.96□□□□□ -0.33
LIN54-201ENST00000340417 ARRB1P49407 418 aaPredicted RBP12.96□□□□□ -0.33
LIN54-201ENST00000340417 CYP20A1Q6UW02 462 aa12.96□□□□□ -0.33
LIN54-201ENST00000340417 LGMNQ99538 433 aa12.96□□□□□ -0.33
LIN54-201ENST00000340417 FAM126AQ9BYI3 521 aaPredicted RBP12.96□□□□□ -0.33
LIN54-201ENST00000340417 ETNK2Q9NVF9 386 aa12.96□□□□□ -0.33
LIN54-201ENST00000340417 DCDC2Q9UHG0 476 aa12.96□□□□□ -0.33
LIN54-201ENST00000340417 CDYLQ9Y232 598 aa12.96□□□□□ -0.33
LIN54-201ENST00000340417 EDDM13A0A1B0GTR0 161 aa12.96□□□□□ -0.34
LIN54-201ENST00000340417 BTN3A1O00481 513 aa12.96□□□□□ -0.34
LIN54-201ENST00000340417 ATP8B1O43520 1251 aa12.96□□□□□ -0.34
LIN54-201ENST00000340417 DCTN3O75935 186 aa12.96□□□□□ -0.34
LIN54-201ENST00000340417 IFNA16P05015 189 aa12.96□□□□□ -0.34
LIN54-201ENST00000340417 HLA-DPA1P20036 260 aa12.96□□□□□ -0.34
LIN54-201ENST00000340417 CAMKK1Q8N5S9 505 aa12.96□□□□□ -0.34
LIN54-201ENST00000340417 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.96□□□□□ -0.34
LIN54-201ENST00000340417 CCDC124Q96CT7 223 aaKnown RBP12.96□□□□□ -0.34
LIN54-201ENST00000340417 UNKQ9C0B0 810 aaKnown RBP12.96□□□□□ -0.34
LIN54-201ENST00000340417 KCTD5Q9NXV2 234 aa12.96□□□□□ -0.34
LIN54-201ENST00000340417 SCML2Q9UQR0 700 aa12.96□□□□□ -0.34
LIN54-201ENST00000340417 TBC1D30Q9Y2I9 924 aa12.96□□□□□ -0.34
LIN54-201ENST00000340417 GLRA3O75311 464 aa12.96□□□□□ -0.34
LIN54-201ENST00000340417 OCM2P0CE71 109 aa12.96□□□□□ -0.34
LIN54-201ENST00000340417 OCMP0CE72 109 aaPredicted RBP12.96□□□□□ -0.34
LIN54-201ENST00000340417 CARD16Q5EG05 197 aa12.96□□□□□ -0.34
LIN54-201ENST00000340417 PAGE2BQ5JRK9 111 aa12.96□□□□□ -0.34
LIN54-201ENST00000340417 SIRPGQ9P1W8 387 aa12.96□□□□□ -0.34
LIN54-201ENST00000340417 TCRBV21S2A2A0A5A6 115 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 SCAMP1O15126 338 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 PSMC3P17980 439 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 MAGEA11P43364 429 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 TSNAXIP1Q2TAA8 658 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 ATP13A4Q4VNC1 1196 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 LY6G5CQ5SRR4 150 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 TAGAPQ8N103 731 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 ARL8AQ96BM9 186 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 CDK14O94921 469 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 CNPP09543 421 aaKnown RBP12.95□□□□□ -0.34
LIN54-201ENST00000340417 MYH1P12882 1939 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 EPCAMP16422 314 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 AASDHQ4L235 1098 aaPredicted RBP12.95□□□□□ -0.34
LIN54-201ENST00000340417 CMTM8Q8IZV2 173 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 NAV1Q8NEY1 1877 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 ACTRT1Q8TDG2 376 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 TOP1MTQ969P6 601 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 HMCESQ96FZ2 354 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 DNAJC1Q96KC8 554 aaKnown RBP12.95□□□□□ -0.34
LIN54-201ENST00000340417 LRRC37BQ96QE4 947 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 ELAC2Q9BQ52 826 aaKnown RBP12.95□□□□□ -0.34
LIN54-201ENST00000340417 LACRTQ9GZZ8 138 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 PCDH18Q9HCL0 1135 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 C9IYK1 514 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 DGKIO75912 1065 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 CHI3L1P36222 383 aaPredicted RBP12.95□□□□□ -0.34
LIN54-201ENST00000340417 IL2P60568 153 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 AP1S1P61966 158 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 PUS10Q3MIT2 529 aaKnown RBP12.95□□□□□ -0.34
LIN54-201ENST00000340417 GALNTL6Q49A17 601 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 TMEM164Q5U3C3 297 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 PTCRAQ6ISU1 281 aaPredicted RBP12.95□□□□□ -0.34
LIN54-201ENST00000340417 SRLQ86TD4 932 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 MAGED4Q96JG8 741 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 CYP2S1Q96SQ9 504 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 MRPL40Q9NQ50 206 aaKnown RBP12.95□□□□□ -0.34
LIN54-201ENST00000340417 CD84Q9UIB8 345 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 COLEC10Q9Y6Z7 277 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 M0R2N6 131 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 MMP8P22894 467 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 RPS24P62847 133 aaKnown RBP12.95□□□□□ -0.34
LIN54-201ENST00000340417 SCARA3Q6AZY7 606 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 NEPROQ6NW34 567 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 CACNA2D2Q9NY47 1150 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 SNX10Q9Y5X0 201 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 PIAS3Q9Y6X2 628 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 KATNA1O75449 491 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 VNN1O95497 513 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 KRT6AP02538 564 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 KRT6BP04259 564 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 CXCR2P25025 360 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 MC4RP32245 332 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 KRT6CP48668 564 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 PPP2R2AP63151 447 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 DPYSL3Q14195 570 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 OSTM1Q86WC4 334 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 PIGKQ92643 395 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 KCTD15Q96SI1 283 aaPredicted RBP12.95□□□□□ -0.34
LIN54-201ENST00000340417 SHCBP1LQ9BZQ2 653 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 NMRAL1Q9HBL8 299 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 BACE2Q9Y5Z0 518 aa12.95□□□□□ -0.34
LIN54-201ENST00000340417 URADA6NGE7 173 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 DMC1Q14565 340 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 C10orf53Q8N6V4 93 aa12.94□□□□□ -0.34
LIN54-201ENST00000340417 LRRN4Q8WUT4 740 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms