RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 C4orf22Q6V702 233 aa16.33■□□□□ 0.2
SCARB1-202ENST00000339570 MRPS26Q9BYN8 205 aaKnown RBP16.33■□□□□ 0.2
SCARB1-202ENST00000339570 PLEKHA5Q9HAU0 1116 aa16.33■□□□□ 0.2
SCARB1-202ENST00000339570 PHF24Q9UPV7 400 aa16.33■□□□□ 0.2
SCARB1-202ENST00000339570 A0A0J9YVX5 310 aa16.33■□□□□ 0.2
SCARB1-202ENST00000339570 H3BRB1 525 aa16.33■□□□□ 0.2
SCARB1-202ENST00000339570 YBX3P16989 372 aaKnown RBP eCLIP16.33■□□□□ 0.21e-6■□□□□ 8
SCARB1-202ENST00000339570 NDST2P52849 883 aa16.33■□□□□ 0.2
SCARB1-202ENST00000339570 TAS2R39P59534 338 aa16.33■□□□□ 0.2
SCARB1-202ENST00000339570 SOX4Q06945 474 aaPredicted RBP16.33■□□□□ 0.2
SCARB1-202ENST00000339570 CDK18Q07002 472 aa16.33■□□□□ 0.2
SCARB1-202ENST00000339570 FASTKQ14296 549 aaKnown RBP16.33■□□□□ 0.2
SCARB1-202ENST00000339570 PABPC1LQ4VXU2 614 aaKnown RBP16.33■□□□□ 0.2
SCARB1-202ENST00000339570 ZBTB49Q6ZSB9 765 aa16.33■□□□□ 0.2
SCARB1-202ENST00000339570 GPRIN1Q7Z2K8 1008 aa16.33■□□□□ 0.2
SCARB1-202ENST00000339570 OSTM1Q86WC4 334 aa16.33■□□□□ 0.2
SCARB1-202ENST00000339570 CENPLQ8N0S6 344 aaPredicted RBP16.33■□□□□ 0.2
SCARB1-202ENST00000339570 PGAM4Q8N0Y7 254 aa16.33■□□□□ 0.2
SCARB1-202ENST00000339570 NUP93Q8N1F7 819 aa16.33■□□□□ 0.2
SCARB1-202ENST00000339570 C12orf42Q96LP6 360 aa16.33■□□□□ 0.2
SCARB1-202ENST00000339570 NAT9Q9BTE0 207 aa16.33■□□□□ 0.2
SCARB1-202ENST00000339570 DRC3Q9H069 523 aa16.33■□□□□ 0.2
SCARB1-202ENST00000339570 TUT1Q9H6E5 874 aaKnown RBP16.33■□□□□ 0.2
SCARB1-202ENST00000339570 PRORSD1PA6NEY8 169 aa16.32■□□□□ 0.2
SCARB1-202ENST00000339570 TIMM44O43615 452 aa16.32■□□□□ 0.2
SCARB1-202ENST00000339570 USP2O75604 605 aaPredicted RBP16.32■□□□□ 0.2
SCARB1-202ENST00000339570 MPOP05164 745 aa16.32■□□□□ 0.2
SCARB1-202ENST00000339570 EDNRBP24530 442 aa16.32■□□□□ 0.2
SCARB1-202ENST00000339570 SLC7A2P52569 658 aa16.32■□□□□ 0.2
SCARB1-202ENST00000339570 ZNF280AP59817 542 aaPredicted RBP16.32■□□□□ 0.2
SCARB1-202ENST00000339570 HEXDCQ8WVB3 486 aa16.32■□□□□ 0.2
SCARB1-202ENST00000339570 ZBTB26Q9HCK0 441 aa16.32■□□□□ 0.2
SCARB1-202ENST00000339570 DOLKQ9UPQ8 538 aa16.32■□□□□ 0.2
SCARB1-202ENST00000339570 ZNF646O15015 1829 aaPredicted RBP16.32■□□□□ 0.2
SCARB1-202ENST00000339570 BRWD3Q6RI45 1802 aa16.32■□□□□ 0.2
SCARB1-202ENST00000339570 RNF103-CHMP3A0A140T963 221 aa16.32■□□□□ 0.2
SCARB1-202ENST00000339570 ATP5BP06576 529 aaKnown RBP16.32■□□□□ 0.2
SCARB1-202ENST00000339570 C1QTNF8P60827 252 aa16.32■□□□□ 0.2
SCARB1-202ENST00000339570 ZC3HC1Q86WB0 502 aaKnown RBP16.32■□□□□ 0.2
SCARB1-202ENST00000339570 MFSD6LQ8IWD5 586 aa16.32■□□□□ 0.2
SCARB1-202ENST00000339570 DTNBP1Q96EV8 351 aa16.32■□□□□ 0.2
SCARB1-202ENST00000339570 ALOX15P16050 662 aaPredicted RBP16.32■□□□□ 0.2
SCARB1-202ENST00000339570 STMN1P16949 149 aa16.32■□□□□ 0.2
SCARB1-202ENST00000339570 FUT11Q495W5 492 aa16.32■□□□□ 0.2
SCARB1-202ENST00000339570 OTUD1Q5VV17 481 aaPredicted RBP16.32■□□□□ 0.2
SCARB1-202ENST00000339570 ZYG11AQ6WRX3 759 aa16.32■□□□□ 0.2
SCARB1-202ENST00000339570 HASPINQ8TF76 798 aa16.32■□□□□ 0.2
SCARB1-202ENST00000339570 TKTL2Q9H0I9 626 aa16.32■□□□□ 0.2
SCARB1-202ENST00000339570 ARHGEF38Q9NXL2 777 aa16.32■□□□□ 0.2
SCARB1-202ENST00000339570 ARHGAP10A1A4S6 786 aa16.31■□□□□ 0.2
SCARB1-202ENST00000339570 HACD1B0YJ81 288 aa16.31■□□□□ 0.2
SCARB1-202ENST00000339570 NR5A2O00482 541 aa16.31■□□□□ 0.2
SCARB1-202ENST00000339570 DENRO43583 198 aaKnown RBP16.31■□□□□ 0.2
SCARB1-202ENST00000339570 SUPT7LO94864 414 aa16.31■□□□□ 0.2
SCARB1-202ENST00000339570 ARMCX2Q7L311 632 aa16.31■□□□□ 0.2
SCARB1-202ENST00000339570 ZNF410Q86VK4 478 aa16.31■□□□□ 0.2
SCARB1-202ENST00000339570 B3GALNT2Q8NCR0 500 aa16.31■□□□□ 0.2
SCARB1-202ENST00000339570 CANT1Q8WVQ1 401 aa16.31■□□□□ 0.2
SCARB1-202ENST00000339570 EBF1Q9UH73 591 aa16.31■□□□□ 0.2
SCARB1-202ENST00000339570 RAB26Q9ULW5 256 aa16.31■□□□□ 0.2
SCARB1-202ENST00000339570 STAP1Q9ULZ2 295 aa16.31■□□□□ 0.2
SCARB1-202ENST00000339570 PRPF19Q9UMS4 504 aaKnown RBP16.31■□□□□ 0.2
SCARB1-202ENST00000339570 DMTF1Q9Y222 760 aa16.31■□□□□ 0.2
SCARB1-202ENST00000339570 ADRA1BP35368 520 aa16.31■□□□□ 0.2
SCARB1-202ENST00000339570 XIAPP98170 497 aa16.31■□□□□ 0.2
SCARB1-202ENST00000339570 STXBP5Q5T5C0 1151 aa16.31■□□□□ 0.2
SCARB1-202ENST00000339570 OR6P1Q8NGX9 317 aa16.31■□□□□ 0.2
SCARB1-202ENST00000339570 WNT8BQ93098 351 aa16.31■□□□□ 0.2
SCARB1-202ENST00000339570 OR12D3Q9UGF7 316 aa16.31■□□□□ 0.2
SCARB1-202ENST00000339570 TBC1D30Q9Y2I9 924 aa16.31■□□□□ 0.2
SCARB1-202ENST00000339570 PPP6CO00743 305 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 UBDO15205 165 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 ENTPD1P49961 510 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 MAXP61244 160 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 YBX1P67809 324 aaKnown RBP16.3■□□□□ 0.2
SCARB1-202ENST00000339570 ANKDD1AQ495B1 522 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 TMEM135Q86UB9 458 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 FAM35AQ86V20 835 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 SPPL2CQ8IUH8 684 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 LRRC43Q8N309 656 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 CENPIQ92674 756 aaPredicted RBP16.3■□□□□ 0.2
SCARB1-202ENST00000339570 ZNF112Q9UJU3 913 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 LRRC14BA6NHZ5 514 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 MEIS3P2A8K0S8 358 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 TMEM114B3SHH9 223 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 MRASO14807 208 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 CDH2P19022 906 aaPredicted RBP16.3■□□□□ 0.2
SCARB1-202ENST00000339570 ARL1P40616 181 aaPredicted RBP16.3■□□□□ 0.2
SCARB1-202ENST00000339570 SLC1A2P43004 574 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 SLC12A1Q13621 1099 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 GRIK4Q16099 956 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 TMEM259Q4ZIN3 620 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 SCIMPQ6UWF3 145 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 ADCY4Q8NFM4 1077 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 RIN3Q8TB24 985 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 CAMKK2Q96RR4 588 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 MPHOSPH6Q99547 160 aaKnown RBP16.3■□□□□ 0.2
SCARB1-202ENST00000339570 FSD1LQ9BXM9 530 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 CDC14AQ9UNH5 594 aa16.3■□□□□ 0.2
SCARB1-202ENST00000339570 CRYL1Q9Y2S2 319 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms