RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 LEUTXA8MZ59 168 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 SHOXO15266 292 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 AKR7A2O43488 359 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 EXTL3O43909 919 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 CAPNS1P04632 268 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 F7P08709 466 aaPredicted RBP9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 TTKP33981 857 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 MYL7Q01449 175 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 ZNF33BQ06732 778 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 GRSF1Q12849 480 aaKnown RBP eCLIP9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 TBRG1Q3YBR2 411 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 AGAP6Q5VW22 663 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 CIAPIN1Q6FI81 312 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 LAYNQ6UX15 382 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 CDH24Q86UP0 819 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 AMIGO1Q86WK6 493 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 TMEM126BQ8IUX1 230 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 PHC2Q8IXK0 858 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 ZBTB44Q8NCP5 570 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 SLC44A1Q8WWI5 657 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 RASSF5Q8WWW0 418 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 CELF1Q92879 486 aaKnown RBP9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 ST6GAL2Q96JF0 529 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 UROC1Q96N76 676 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 AGAP4Q96P64 663 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 KCTD14Q9BQ13 255 aaPredicted RBP9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 EFHD1Q9BUP0 239 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 TRAF4Q9BUZ4 470 aaPredicted RBP9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 REXO4Q9GZR2 422 aaKnown RBP9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 TNKS2Q9H2K2 1166 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 KCND2Q9NZV8 630 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 KLF15Q9UIH9 416 aa9.77□□□□□ -0.85
PTCHD4-201ENST00000339488 TIAM2Q8IVF5 1701 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 KIF13BQ9NQT8 1826 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 I3L521 148 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 SEC14L2O76054 403 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 SEC24AO95486 1093 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 HDCP19113 662 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 GSTM2P28161 218 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 CDH5P33151 784 aaPredicted RBP9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 EIF2DP41214 584 aaKnown RBP9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 AP2S1P53680 142 aaPredicted RBP9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 OR2B6P58173 313 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 PSMC6P62333 389 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 MORF4L2Q15014 288 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 PCBP1Q15365 356 aaKnown RBP eCLIP9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 IMPG1Q17R60 797 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 GTF2IRD2BQ6EKJ0 949 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 GTF2IRD2Q86UP8 949 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 KCTD17Q8N5Z5 321 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 PDPRQ8NCN5 879 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 OR4M1Q8NGD0 313 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 OR10Z1Q8NGY1 313 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 PLBD2Q8NHP8 589 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 CPT1BQ92523 772 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 SORT1Q99523 831 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 UCK2Q9BZX2 261 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 COG4Q9H9E3 785 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 GPN2Q9H9Y4 310 aaPredicted RBP9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 LRP2BPQ9P2M1 347 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 GABBR1Q9UBS5 961 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 CNOT11Q9UKZ1 510 aaKnown RBP9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 MFHAS1Q9Y4C4 1052 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 DAGLAQ9Y4D2 1042 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 FAM155AB1AL88 458 aaPredicted RBP9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 C9IYK1 514 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 USP17L12C9JPN9 530 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 USP17L21D6R901 530 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 RFPL1O75677 317 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 INMTO95050 263 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 NDST3O95803 873 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 FGF3P11487 239 aaPredicted RBP9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 ALOX12P18054 663 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 CCR10P46092 362 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 NME5P56597 212 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 NCS1P62166 190 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 UBE3AQ05086 875 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 ART3Q13508 389 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 YIF1BQ5BJH7 314 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 GPATCH4Q5T3I0 446 aaKnown RBP9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 FAM219BQ5XKK7 198 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 ABRAXAS1Q6UWZ7 409 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 C16orf89Q6UX73 402 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 GDPD3Q7L5L3 318 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 ZC3H3Q8IXZ2 948 aaKnown RBP9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 OR4M2Q8NGB6 313 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 PPP1R13LQ8WUF5 828 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 MCRS1Q96EZ8 462 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 FAM84AQ96KN4 292 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 PIP5K1AQ99755 562 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 BTBD2Q9BX70 525 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 FAM126AQ9BYI3 521 aaPredicted RBP9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 GREM2Q9H772 168 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 RANGRFQ9HD47 186 aaPredicted RBP9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 TBC1D22BQ9NU19 505 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 SCML1Q9UN30 329 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 SORCS3Q9UPU3 1222 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 ATAD5Q96QE3 1844 aa9.76□□□□□ -0.85
PTCHD4-201ENST00000339488 OR5K3A6NET4 321 aa9.75□□□□□ -0.85
PTCHD4-201ENST00000339488 M0R3G1 203 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms