RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 CSNK1EP49674 416 aaKnown RBP15.52■□□□□ 0.08
PRKN-201ENST00000338468 NDST2P52849 883 aa15.52■□□□□ 0.08
PRKN-201ENST00000338468 GEMIN4P57678 1058 aaKnown RBP15.52■□□□□ 0.08
PRKN-201ENST00000338468 CYTH1Q15438 398 aa15.52■□□□□ 0.08
PRKN-201ENST00000338468 UAP1L1Q3KQV9 507 aa15.52■□□□□ 0.08
PRKN-201ENST00000338468 H2AFVQ71UI9 128 aa15.52■□□□□ 0.08
PRKN-201ENST00000338468 POLNQ7Z5Q5 900 aa15.52■□□□□ 0.08
PRKN-201ENST00000338468 CNGA4Q8IV77 575 aa15.52■□□□□ 0.08
PRKN-201ENST00000338468 TP53INP2Q8IXH6 220 aa15.52■□□□□ 0.08
PRKN-201ENST00000338468 MINDY1Q8N5J2 469 aa15.52■□□□□ 0.08
PRKN-201ENST00000338468 OR6K2Q8NGY2 324 aa15.52■□□□□ 0.08
PRKN-201ENST00000338468 TEKT4Q8WW24 435 aa15.52■□□□□ 0.08
PRKN-201ENST00000338468 TSC1Q92574 1164 aa15.52■□□□□ 0.08
PRKN-201ENST00000338468 HSPH1Q92598 858 aa15.52■□□□□ 0.08
PRKN-201ENST00000338468 SLC6A18Q96N87 628 aa15.52■□□□□ 0.08
PRKN-201ENST00000338468 HDAC8Q9BY41 377 aa15.52■□□□□ 0.08
PRKN-201ENST00000338468 KDM4CQ9H3R0 1056 aa15.52■□□□□ 0.08
PRKN-201ENST00000338468 DEF6Q9H4E7 631 aa15.52■□□□□ 0.08
PRKN-201ENST00000338468 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.52■□□□□ 0.08
PRKN-201ENST00000338468 ETNK2Q9NVF9 386 aa15.52■□□□□ 0.08
PRKN-201ENST00000338468 DNAAF2Q9NVR5 837 aaKnown RBP15.52■□□□□ 0.08
PRKN-201ENST00000338468 UVRAGQ9P2Y5 699 aa15.52■□□□□ 0.08
PRKN-201ENST00000338468 TBC1D3DA0A087WVF3 549 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 TBC1D3IA0A087WXS9 549 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 TBC1D3EA0A087X179 549 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 TBC1D3KA0A087X1G2 549 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 A0A1B0GVT2 93 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 TBC1D3FA6NER0 549 aaPredicted RBP15.51■□□□□ 0.07
PRKN-201ENST00000338468 TBC1D3LB9A6J9 549 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 AKR1B10O60218 316 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 PRAMEF11O60813 436 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 PROSCO94903 275 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 WNT1P04628 370 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 TMEM253P0C7T8 217 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 TBC1D3HP0C7X1 549 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 IL4RP24394 825 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 PAPOLAP51003 745 aaKnown RBP15.51■□□□□ 0.07
PRKN-201ENST00000338468 ARSEP51690 589 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 ZNF75DP51815 510 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 AFF3P51826 1226 aaKnown RBP15.51■□□□□ 0.07
PRKN-201ENST00000338468 ZNF135P52742 658 aaPredicted RBP15.51■□□□□ 0.07
PRKN-201ENST00000338468 TSR1Q2NL82 804 aaKnown RBP15.51■□□□□ 0.07
PRKN-201ENST00000338468 INO80DQ53TQ3 878 aaPredicted RBP15.51■□□□□ 0.07
PRKN-201ENST00000338468 ATXN7L2Q5T6C5 722 aaPredicted RBP15.51■□□□□ 0.07
PRKN-201ENST00000338468 TBC1D3GQ6DHY5 549 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 TBC1D3CQ6IPX1 549 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 ARHGAP36Q6ZRI8 547 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 ERN2Q76MJ5 926 aaKnown RBP15.51■□□□□ 0.07
PRKN-201ENST00000338468 ZNF354CQ86Y25 554 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 TBC1D3Q8IZP1 549 aaPredicted RBP15.51■□□□□ 0.07
PRKN-201ENST00000338468 DEFB124Q8NES8 71 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 OR2AP1Q8NGE2 309 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 FAM71BQ8TC56 605 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 CTNNBL1Q8WYA6 563 aaPredicted RBP15.51■□□□□ 0.07
PRKN-201ENST00000338468 CSPG4P5Q96PW8 444 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 SLC32A1Q9H598 525 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 ZDHHC6Q9H6R6 413 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 IL21RQ9HBE5 538 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 PCDH18Q9HCL0 1135 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 CTTNBP2NLQ9P2B4 639 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 LHX3Q9UBR4 397 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 NEUROG3Q9Y4Z2 214 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 KNL1Q8NG31 2342 aa15.51■□□□□ 0.07
PRKN-201ENST00000338468 H3BRJ5 948 aa15.5■□□□□ 0.07
PRKN-201ENST00000338468 DAPK3O43293 454 aa15.5■□□□□ 0.07
PRKN-201ENST00000338468 CD48P09326 243 aa15.5■□□□□ 0.07
PRKN-201ENST00000338468 CD59P13987 128 aa15.5■□□□□ 0.07
PRKN-201ENST00000338468 AMPD1P23109 780 aa15.5■□□□□ 0.07
PRKN-201ENST00000338468 ITGB7P26010 798 aa15.5■□□□□ 0.07
PRKN-201ENST00000338468 GRIA4P48058 902 aa15.5■□□□□ 0.07
PRKN-201ENST00000338468 ATXN3P54252 364 aaPredicted RBP15.5■□□□□ 0.07
PRKN-201ENST00000338468 TAS2R40P59535 323 aa15.5■□□□□ 0.07
PRKN-201ENST00000338468 KIF19Q2TAC6 998 aa15.5■□□□□ 0.07
PRKN-201ENST00000338468 MYLK3Q32MK0 819 aa15.5■□□□□ 0.07
PRKN-201ENST00000338468 ATP13A4Q4VNC1 1196 aa15.5■□□□□ 0.07
PRKN-201ENST00000338468 PARS2Q7L3T8 475 aaKnown RBP15.5■□□□□ 0.07
PRKN-201ENST00000338468 PIP4P1Q86T03 277 aa15.5■□□□□ 0.07
PRKN-201ENST00000338468 TRIM69Q86WT6 500 aa15.5■□□□□ 0.07
PRKN-201ENST00000338468 CASKIN2Q8WXE0 1202 aa15.5■□□□□ 0.07
PRKN-201ENST00000338468 CCDC42Q96M95 316 aa15.5■□□□□ 0.07
PRKN-201ENST00000338468 ZDHHC5Q9C0B5 715 aa15.5■□□□□ 0.07
PRKN-201ENST00000338468 DONSONQ9NYP3 566 aa15.5■□□□□ 0.07
PRKN-201ENST00000338468 LHX6Q9UPM6 363 aa15.5■□□□□ 0.07
PRKN-201ENST00000338468 ANKRD6Q9Y2G4 727 aa15.5■□□□□ 0.07
PRKN-201ENST00000338468 SNX11Q9Y5W9 270 aa15.5■□□□□ 0.07
PRKN-201ENST00000338468 DOCK9Q9BZ29 2069 aa15.5■□□□□ 0.07
PRKN-201ENST00000338468 DSPP15924 2871 aaKnown RBP15.5■□□□□ 0.07
PRKN-201ENST00000338468 A0A1W2PR77 199 aa15.49■□□□□ 0.07
PRKN-201ENST00000338468 INSIG1O15503 277 aa15.49■□□□□ 0.07
PRKN-201ENST00000338468 SPINT1O43278 529 aa15.49■□□□□ 0.07
PRKN-201ENST00000338468 MAT2AP31153 395 aaKnown RBP15.49■□□□□ 0.07
PRKN-201ENST00000338468 SNRPD1P62314 119 aaKnown RBP15.49■□□□□ 0.07
PRKN-201ENST00000338468 RACK1P63244 317 aaKnown RBP15.49■□□□□ 0.07
PRKN-201ENST00000338468 HLA-BQ31612 363 aa15.49■□□□□ 0.07
PRKN-201ENST00000338468 SLC35G2Q8TBE7 412 aa15.49■□□□□ 0.07
PRKN-201ENST00000338468 MRFAP1L1Q96HT8 127 aa15.49■□□□□ 0.07
PRKN-201ENST00000338468 PREBQ9HCU5 417 aa15.49■□□□□ 0.07
PRKN-201ENST00000338468 UBA2Q9UBT2 640 aaPredicted RBP15.49■□□□□ 0.07
PRKN-201ENST00000338468 ZFR2Q9UPR6 939 aaKnown RBP15.49■□□□□ 0.07
PRKN-201ENST00000338468 DMXL2Q8TDJ6 3036 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms