RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 TNFRSF21O75509 655 aa21.24■□□□□ 0.99
RNF40-201ENST00000324685 CCR4P51679 360 aa21.24■□□□□ 0.99
RNF40-201ENST00000324685 SLC15A2Q16348 729 aa21.24■□□□□ 0.99
RNF40-201ENST00000324685 INSCQ1MX18 579 aa21.24■□□□□ 0.99
RNF40-201ENST00000324685 ART4Q93070 314 aa21.24■□□□□ 0.99
RNF40-201ENST00000324685 CPA4Q9UI42 421 aa21.24■□□□□ 0.99
RNF40-201ENST00000324685 ITGAVP06756 1048 aa21.24■□□□□ 0.99
RNF40-201ENST00000324685 BDNFP23560 247 aa21.24■□□□□ 0.99
RNF40-201ENST00000324685 PSEN2P49810 448 aa21.24■□□□□ 0.99
RNF40-201ENST00000324685 SLC25A3Q00325 362 aa21.24■□□□□ 0.99
RNF40-201ENST00000324685 ELMO3Q96BJ8 720 aa21.24■□□□□ 0.99
RNF40-201ENST00000324685 ZDHHC6Q9H6R6 413 aa21.24■□□□□ 0.99
RNF40-201ENST00000324685 OR12D3Q9UGF7 316 aa21.24■□□□□ 0.99
RNF40-201ENST00000324685 CPS1P31327 1500 aa21.24■□□□□ 0.99
RNF40-201ENST00000324685 CCDC182A6NF36 153 aa21.24■□□□□ 0.99
RNF40-201ENST00000324685 TXNDC11Q6PKC3 985 aa21.24■□□□□ 0.99
RNF40-201ENST00000324685 DEFB128Q7Z7B8 93 aa21.24■□□□□ 0.99
RNF40-201ENST00000324685 EPS8L1Q8TE68 723 aa21.24■□□□□ 0.99
RNF40-201ENST00000324685 AHCYL2Q96HN2 611 aaKnown RBP21.24■□□□□ 0.99
RNF40-201ENST00000324685 REXO5Q96IC2 774 aaKnown RBP21.24■□□□□ 0.99
RNF40-201ENST00000324685 MRPL57Q9BQC6 102 aaKnown RBP21.24■□□□□ 0.99
RNF40-201ENST00000324685 GBA2Q9HCG7 927 aaPredicted RBP21.24■□□□□ 0.99
RNF40-201ENST00000324685 MCM8Q9UJA3 840 aa21.24■□□□□ 0.99
RNF40-201ENST00000324685 CEP152O94986 1710 aa21.24■□□□□ 0.99
RNF40-201ENST00000324685 CXCL11O14625 94 aa21.24■□□□□ 0.99
RNF40-201ENST00000324685 AMHP03971 560 aa21.24■□□□□ 0.99
RNF40-201ENST00000324685 GRIA4P48058 902 aa21.24■□□□□ 0.99
RNF40-201ENST00000324685 CCT3P49368 545 aaKnown RBP21.24■□□□□ 0.99
RNF40-201ENST00000324685 EARS2Q5JPH6 523 aaKnown RBP21.24■□□□□ 0.99
RNF40-201ENST00000324685 PPM1LQ5SGD2 360 aa21.24■□□□□ 0.99
RNF40-201ENST00000324685 BHLHB9Q6PI77 547 aa21.24■□□□□ 0.99
RNF40-201ENST00000324685 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.24■□□□□ 0.99
RNF40-201ENST00000324685 GALNT8Q9NY28 637 aa21.24■□□□□ 0.99
RNF40-201ENST00000324685 SLIT1O75093 1534 aa21.24■□□□□ 0.99
RNF40-201ENST00000324685 LRRC14BA6NHZ5 514 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 TTPAP49638 278 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 PDK4Q16654 411 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 TRAPPC5Q8IUR0 188 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 S100ZQ8WXG8 99 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 ELMO1Q92556 727 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 VPS35Q96QK1 796 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 EPB41L1Q9H4G0 881 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 CMTM6Q9NX76 183 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 COQ6Q9Y2Z9 468 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 PTPRMP28827 1452 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 NBPF12Q5TAG4 269 aaPredicted RBP21.23■□□□□ 0.99
RNF40-201ENST00000324685 LRRC49Q8IUZ0 686 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 CYP2W1Q8TAV3 490 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 C18orf25Q96B23 403 aaPredicted RBP21.23■□□□□ 0.99
RNF40-201ENST00000324685 SRP54P61011 504 aaKnown RBP21.23■□□□□ 0.99
RNF40-201ENST00000324685 USP46P62068 366 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 TTC7BQ86TV6 843 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.23■□□□□ 0.99
RNF40-201ENST00000324685 COMMD9Q9P000 198 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 MARCH2Q9P0N8 246 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 VPS4AQ9UN37 437 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 RAP2CQ9Y3L5 183 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 A0A087X0B3 334 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 AKR1A1P14550 325 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 ANPEPP15144 967 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 PTPN1P18031 435 aaKnown RBP21.23■□□□□ 0.99
RNF40-201ENST00000324685 GSTT1P30711 240 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 CD86P42081 329 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 NPNTQ6UXI9 565 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 PORCNQ9H237 461 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 CLUHO75153 1309 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 TAF4O00268 1085 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 MAGEC1O60732 1142 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 SEC24AO95486 1093 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 MAPKAPK3Q16644 382 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 LRRC19Q9H756 370 aa21.23■□□□□ 0.99
RNF40-201ENST00000324685 FBXO6Q9NRD1 293 aaPredicted RBP21.23■□□□□ 0.99
RNF40-201ENST00000324685 RPL26L1Q9UNX3 145 aaKnown RBP21.23■□□□□ 0.99
RNF40-201ENST00000324685 PDHXO00330 501 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 DDI2Q5TDH0 399 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 FBXL19Q6PCT2 694 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 UNC5AQ6ZN44 842 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 SFRP1Q8N474 314 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 WDR60Q8WVS4 1066 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 MLPHQ9BV36 600 aaPredicted RBP21.22■□□□□ 0.99
RNF40-201ENST00000324685 C2orf49Q9BVC5 232 aaPredicted RBP21.22■□□□□ 0.99
RNF40-201ENST00000324685 PRDM8Q9NQV8 689 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 KPNA3O00505 521 aaPredicted RBP21.22■□□□□ 0.99
RNF40-201ENST00000324685 SHBGP04278 402 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 SERPINA6P08185 405 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 EPHX2P34913 555 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 RAB10P61026 200 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 TCEA2Q15560 299 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 FAM183BPQ6ZVS7 135 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 AGAP11Q8TF27 550 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 MARK4Q96L34 752 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 PLGRKTQ9HBL7 147 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 DIP2AQ14689 1571 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 PRG2P13727 222 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 SLC26A3P40879 764 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 PTDSS1P48651 473 aaKnown RBP21.22■□□□□ 0.99
RNF40-201ENST00000324685 NR1D2Q14995 579 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 QPRTQ15274 297 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 PABPC1LQ4VXU2 614 aaKnown RBP21.22■□□□□ 0.99
RNF40-201ENST00000324685 ZBTB45Q96K62 511 aaPredicted RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms