RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 TMEM191CA6NGB0 347 aa11.02□□□□□ -0.64
SNRNP200-201ENST00000323853 CDC25CP30307 473 aa11.02□□□□□ -0.64
SNRNP200-201ENST00000323853 PAIP1Q9H074 479 aaKnown RBP11.02□□□□□ -0.64
SNRNP200-201ENST00000323853 COG5Q9UP83 839 aa11.02□□□□□ -0.64
SNRNP200-201ENST00000323853 KNDC1Q76NI1 1749 aa11.02□□□□□ -0.64
SNRNP200-201ENST00000323853 ATP5C1P36542 298 aaKnown RBP11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 RAB14P61106 215 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 ALFQ53S48 1182 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 FGD3Q5JSP0 725 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 ATAD3BQ5T9A4 648 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 ZNF549Q6P9A3 640 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 JOSD2Q8TAC2 188 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 FBXO30Q8TB52 745 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 LGMNQ99538 433 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 GTF2A1LQ9UNN4 478 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 COL1A2P08123 1366 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 SNHG28P0DPA3 235 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 GRIA3P42263 894 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 MATKP42679 507 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 GSSP48637 474 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 KCTD19Q17RG1 926 aaPredicted RBP11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 MON1BQ7L1V2 547 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 CHMP1BQ7LBR1 199 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 LRRC49Q8IUZ0 686 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 AADATQ8N5Z0 425 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 ALG3Q92685 438 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 OSBPL10Q9BXB5 764 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 DUSP16Q9BY84 665 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 RAD18Q9NS91 495 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 SLC17A7Q9P2U7 560 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 KLQ9UEF7 1012 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 DPP7Q9UHL4 492 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 LEF1Q9UJU2 399 aaPredicted RBP11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 PARP4Q9UKK3 1724 aaKnown RBP11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 YDJCA8MPS7 323 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 ADCY6O43306 1168 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 FNDC3BQ53EP0 1204 aaKnown RBP11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 TXNDC11Q6PKC3 985 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 EPHX4Q8IUS5 362 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 C12orf29Q8N999 325 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 MECRQ9BV79 373 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 HDHD2Q9H0R4 259 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 THG1LQ9NWX6 298 aaKnown RBP11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 SESN1Q9Y6P5 492 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 PIK3C2AO00443 1686 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 CLDN5O00501 218 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 PQBP1O60828 265 aaKnown RBP11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 EDF1O60869 148 aaKnown RBP11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 POLR2EP19388 210 aaKnown RBP11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 TALDO1P37837 337 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 ABL2P42684 1182 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 POLR2LP62875 67 aaKnown RBP11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 FNBP1LQ5T0N5 605 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 C19orf60Q96EN9 201 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 NLNQ9BYT8 704 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 BPIFA1Q9NP55 256 aa11.02□□□□□ -0.65
SNRNP200-201ENST00000323853 MYL12BO14950 172 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 PAPSS1O43252 624 aaPredicted RBP11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 WBP4O75554 376 aaKnown RBP11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 FARP2O94887 1054 aaPredicted RBP11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 GJB1P08034 283 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 PSMA3P25788 255 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 TM4SF1P30408 202 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 CLK2P49760 499 aaKnown RBP11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 BNIP2Q12982 314 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 EIF2B5Q13144 721 aaKnown RBP11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 PAGE2BQ5JRK9 111 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 DGKKQ5KSL6 1271 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 PPM1LQ5SGD2 360 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 RSBN1Q5VWQ0 802 aaPredicted RBP11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 ULK2Q8IYT8 1036 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 OMDQ99983 421 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 CCDC3Q9BQI4 270 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 PCDH18Q9HCL0 1135 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 MRPL17Q9NRX2 175 aaKnown RBP11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 ANXA5P08758 320 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 HPGDP15428 266 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 TTPAP49638 278 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 MAPK10P53779 464 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 DET1Q7L5Y6 550 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 MLPHQ9BV36 600 aaPredicted RBP11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 CEP44Q9C0F1 390 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 SERHL2Q9H4I8 314 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 SERHLQ9NQF3 203 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 BTRCQ9Y297 605 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 EFCAB10A6NFE3 127 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 NAGLUP54802 743 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 NOMO1Q15155 1222 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 CYP2A13Q16696 494 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 USP39Q53GS9 565 aaKnown RBP11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 SETMARQ53H47 684 aaPredicted RBP11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 ABHD15Q6UXT9 468 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 REEP1Q9H902 201 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 ASNA1O43681 348 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 ENTPD5O75356 428 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 C4BPAP04003 597 aaKnown RBP11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 TFEBP19484 476 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 PAX3P23760 479 aa11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 FEN1P39748 380 aaKnown RBP11.01□□□□□ -0.65
SNRNP200-201ENST00000323853 CRYBB1P53674 252 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms