RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 DDX28Q9NUL7 540 aaKnown RBP16.66■□□□□ 0.26
CLIP4-201ENST00000320081 ZNF112Q9UJU3 913 aa16.66■□□□□ 0.26
CLIP4-201ENST00000320081 FAM149AA5PLN7 773 aa16.66■□□□□ 0.26
CLIP4-201ENST00000320081 IQCF5A8MTL0 148 aa16.66■□□□□ 0.26
CLIP4-201ENST00000320081 C5orf58C9J3I9 102 aa16.66■□□□□ 0.26
CLIP4-201ENST00000320081 H0YGN5 161 aa16.66■□□□□ 0.26
CLIP4-201ENST00000320081 GRIN3BO60391 1043 aa16.66■□□□□ 0.26
CLIP4-201ENST00000320081 MMP3P08254 477 aa16.66■□□□□ 0.26
CLIP4-201ENST00000320081 NOMO2Q5JPE7 1267 aa16.66■□□□□ 0.26
CLIP4-201ENST00000320081 ADGRD1Q6QNK2 874 aa16.66■□□□□ 0.26
CLIP4-201ENST00000320081 NSMCE2Q96MF7 247 aa16.66■□□□□ 0.26
CLIP4-201ENST00000320081 CADM1Q9BY67 442 aaKnown RBP16.66■□□□□ 0.26
CLIP4-201ENST00000320081 NFS1Q9Y697 457 aa16.66■□□□□ 0.26
CLIP4-201ENST00000320081 CHRNGP07510 517 aa16.66■□□□□ 0.26
CLIP4-201ENST00000320081 NMBRP28336 390 aa16.66■□□□□ 0.26
CLIP4-201ENST00000320081 C1orf220Q5T0J3 134 aa16.66■□□□□ 0.26
CLIP4-201ENST00000320081 LPCAT2Q7L5N7 544 aa16.66■□□□□ 0.26
CLIP4-201ENST00000320081 NT5DC4Q86YG4 428 aa16.66■□□□□ 0.26
CLIP4-201ENST00000320081 PLD3Q8IV08 490 aa16.66■□□□□ 0.26
CLIP4-201ENST00000320081 ATG16L2Q8NAA4 619 aa16.66■□□□□ 0.26
CLIP4-201ENST00000320081 DGCR6LQ9BY27 220 aa16.66■□□□□ 0.26
CLIP4-201ENST00000320081 GPR88Q9GZN0 384 aa16.66■□□□□ 0.26
CLIP4-201ENST00000320081 UBA2Q9UBT2 640 aaPredicted RBP16.66■□□□□ 0.26
CLIP4-201ENST00000320081 FAM58BPP0C7Q3 252 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 FLT3LGP49771 235 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 SLC7A2P52569 658 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 MAPK11Q15759 364 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 CCL14Q16627 93 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 RPS27LQ71UM5 84 aaKnown RBP16.65■□□□□ 0.26
CLIP4-201ENST00000320081 GPR141Q7Z602 305 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 CLHC1Q8NHS4 586 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 ZNF317Q96PQ6 595 aaPredicted RBP16.65■□□□□ 0.26
CLIP4-201ENST00000320081 POLR1EQ9GZS1 481 aaKnown RBP16.65■□□□□ 0.26
CLIP4-201ENST00000320081 SDCBP2Q9H190 292 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 FBXO44Q9H4M3 255 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 ABCC13Q9NSE7 274 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 EIF3LQ9Y262 564 aaKnown RBP16.65■□□□□ 0.26
CLIP4-201ENST00000320081 LMO7Q8WWI1 1683 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 SKIV2L2P42285 1042 aaKnown RBP16.65■□□□□ 0.26
CLIP4-201ENST00000320081 TIGD2Q4W5G0 525 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 TEX44Q53QW1 395 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 FSTL4Q6MZW2 842 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 TAS1R3Q7RTX0 852 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 IGDCC3Q8IVU1 814 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 LZICQ8WZA0 190 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 BORCS6Q96GS4 357 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 TBATAQ96M53 351 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 MYH7P12883 1935 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 TLR5O60602 858 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 FASP25445 335 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 PSME3P61289 254 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 LSM3P62310 102 aaKnown RBP16.65■□□□□ 0.26
CLIP4-201ENST00000320081 PITX1P78337 314 aaPredicted RBP16.65■□□□□ 0.26
CLIP4-201ENST00000320081 CPSF6Q16630 551 aaKnown RBP eCLIP16.65■□□□□ 0.26
CLIP4-201ENST00000320081 CNSTQ6PJW8 725 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 NECAB2Q7Z6G3 386 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 PIGWQ7Z7B1 504 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 FAM120BQ96EK7 910 aaKnown RBP16.65■□□□□ 0.26
CLIP4-201ENST00000320081 FIZ1Q96SL8 496 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 DPY30Q9C005 99 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 COPG2Q9UBF2 871 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 GGA2Q9UJY4 613 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 U3KQV3 271 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 SLCO1B7G3V0H7 640 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 RGS5O15539 181 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 RPL17P18621 184 aaKnown RBP16.65■□□□□ 0.26
CLIP4-201ENST00000320081 PIK3R1P27986 724 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 CRABP2P29373 138 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 RAB10P61026 200 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 IL5RAQ01344 420 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 TARBP2Q15633 366 aaKnown RBP16.65■□□□□ 0.26
CLIP4-201ENST00000320081 CACHD1Q5VU97 1274 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 CRELD2Q6UXH1 353 aaPredicted RBP16.65■□□□□ 0.26
CLIP4-201ENST00000320081 ZDHHC14Q8IZN3 488 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 PNPLA1Q8N8W4 532 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 SLC35B2Q8TB61 432 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 GATA5Q9BWX5 397 aaPredicted RBP16.65■□□□□ 0.26
CLIP4-201ENST00000320081 ADGRE3Q9BY15 652 aa16.65■□□□□ 0.26
CLIP4-201ENST00000320081 A0A1W2PQH9 124 aa16.64■□□□□ 0.25
CLIP4-201ENST00000320081 RGS20O76081 388 aa16.64■□□□□ 0.25
CLIP4-201ENST00000320081 GPX6P59796 221 aa16.64■□□□□ 0.25
CLIP4-201ENST00000320081 MRPS6P82932 125 aaKnown RBP16.64■□□□□ 0.25
CLIP4-201ENST00000320081 DSC2Q02487 901 aa16.64■□□□□ 0.25
CLIP4-201ENST00000320081 C16orf72Q14CZ0 275 aa16.64■□□□□ 0.25
CLIP4-201ENST00000320081 TTLL9Q3SXZ7 439 aa16.64■□□□□ 0.25
CLIP4-201ENST00000320081 GPR158Q5T848 1215 aa16.64■□□□□ 0.25
CLIP4-201ENST00000320081 LRRC52Q8N7C0 313 aa16.64■□□□□ 0.25
CLIP4-201ENST00000320081 PPTC7Q8NI37 304 aa16.64■□□□□ 0.25
CLIP4-201ENST00000320081 NAT14Q8WUY8 206 aa16.64■□□□□ 0.25
CLIP4-201ENST00000320081 OR51F1A6NGY5 319 aa16.64■□□□□ 0.25
CLIP4-201ENST00000320081 SIN3BO75182 1162 aa16.64■□□□□ 0.25
CLIP4-201ENST00000320081 ALDH9A1P49189 494 aa16.64■□□□□ 0.25
CLIP4-201ENST00000320081 TAF10Q12962 218 aa16.64■□□□□ 0.25
CLIP4-201ENST00000320081 KRT72Q14CN4 511 aa16.64■□□□□ 0.25
CLIP4-201ENST00000320081 TRIM60Q495X7 471 aa16.64■□□□□ 0.25
CLIP4-201ENST00000320081 ZC3H12BQ5HYM0 836 aaKnown RBP16.64■□□□□ 0.25
CLIP4-201ENST00000320081 CHADLQ6NUI6 762 aa16.64■□□□□ 0.25
CLIP4-201ENST00000320081 ZNF572Q7Z3I7 529 aaPredicted RBP16.64■□□□□ 0.25
CLIP4-201ENST00000320081 C12orf50Q8NA57 414 aaPredicted RBP16.64■□□□□ 0.25
CLIP4-201ENST00000320081 PCSK9Q8NBP7 692 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms