RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 UBE2E3Q969T4 207 aa13□□□□□ -0.33
SPTBN2-201ENST00000309996 CELF6Q96J87 481 aaKnown RBP13□□□□□ -0.33
SPTBN2-201ENST00000309996 EPB41L1Q9H4G0 881 aa13□□□□□ -0.33
SPTBN2-201ENST00000309996 ERVK-11Q9UQG0 969 aa13□□□□□ -0.33
SPTBN2-201ENST00000309996 FMO4P31512 558 aa13□□□□□ -0.33
SPTBN2-201ENST00000309996 WDR49Q8IV35 697 aa13□□□□□ -0.33
SPTBN2-201ENST00000309996 CDYL2Q8N8U2 506 aa13□□□□□ -0.33
SPTBN2-201ENST00000309996 POP1Q99575 1024 aaKnown RBP13□□□□□ -0.33
SPTBN2-201ENST00000309996 COG5Q9UP83 839 aa13□□□□□ -0.33
SPTBN2-201ENST00000309996 XKRYO14609 159 aa13□□□□□ -0.33
SPTBN2-201ENST00000309996 UBOX5O94941 541 aa13□□□□□ -0.33
SPTBN2-201ENST00000309996 PGAM1P18669 254 aa13□□□□□ -0.33
SPTBN2-201ENST00000309996 TRIM38O00635 465 aa13□□□□□ -0.33
SPTBN2-201ENST00000309996 BMPR2Q13873 1038 aa13□□□□□ -0.33
SPTBN2-201ENST00000309996 HSDL1Q3SXM5 330 aa13□□□□□ -0.33
SPTBN2-201ENST00000309996 C8orf59Q8N0T1 100 aaPredicted RBP13□□□□□ -0.33
SPTBN2-201ENST00000309996 SMARCD1Q96GM5 515 aa13□□□□□ -0.33
SPTBN2-201ENST00000309996 SEMA6AQ9H2E6 1030 aa13□□□□□ -0.33
SPTBN2-201ENST00000309996 GPRC5CQ9NQ84 441 aa13□□□□□ -0.33
SPTBN2-201ENST00000309996 CRNNQ9UBG3 495 aaPredicted RBP13□□□□□ -0.33
SPTBN2-201ENST00000309996 DMTF1Q9Y222 760 aa13□□□□□ -0.33
SPTBN2-201ENST00000309996 ZNF521Q96K83 1311 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 NKRFO15226 690 aaKnown RBP eCLIP12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 HSD3B1P14060 373 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 CYP11B2P19099 503 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 MYL9P24844 172 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 ACLYP53396 1101 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 TAS2R41P59536 307 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 RPL19P84098 196 aaKnown RBP12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 TSGA10IPQ3SY00 556 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 INTS11Q5TA45 600 aaKnown RBP12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 ACTRT1Q8TDG2 376 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 C5orf34Q96MH7 638 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 ARHGEF5Q12774 1597 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 ZNF879B4DU55 563 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 ZNF432O94892 652 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 LCA5LO95447 670 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 TPH1P17752 444 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 CARTPTQ16568 116 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 INAVAQ3KP66 663 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 DNAAF1Q8NEP3 725 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 USB1Q9BQ65 265 aaKnown RBP12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 ACE2Q9BYF1 805 aaPredicted RBP12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 FAM126AQ9BYI3 521 aaPredicted RBP12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 IFT52Q9Y366 437 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 MGAT1P26572 445 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 FAM98AQ8NCA5 519 aaKnown RBP12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 XPR1Q9UBH6 696 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 TIMM13Q9Y5L4 95 aaPredicted RBP12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 IRAK3Q9Y616 596 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 PDHXO00330 501 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 NPR3P17342 541 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 HNF4AP41235 474 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 TUBB3Q13509 450 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 PCNX4Q63HM2 1172 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 ATG4CQ96DT6 458 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 CEP41Q9BYV8 373 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 CYP3A43Q9HB55 503 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 CCDC162PA2VCL2 907 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 H3BM21 787 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 RECQL5O94762 991 aaPredicted RBP12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 ADH1CP00326 375 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 NR2F1P10589 423 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 IDH2P48735 452 aaKnown RBP12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 SLC34A1Q06495 639 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 FBXO47Q5MNV8 452 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 ZNF470Q6ECI4 717 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 ZNF227Q86WZ6 799 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 COPS7AQ9UBW8 275 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 ME2P23368 584 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 GJA8P48165 433 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 ADARP55265 1226 aaKnown RBP12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 PFKPQ01813 784 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 MBTD1Q05BQ5 628 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 EIF2S3LQ2VIR3 472 aaKnown RBP12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 TMEM164Q5U3C3 297 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 SNX20Q7Z614 316 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 SAPCD2Q86UD0 394 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 ARHGEF19Q8IW93 802 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 OR7A2PQ8NGA2 310 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 ISCA1Q9BUE6 129 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 RRN3Q9NYV6 651 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 PTGFRNQ9P2B2 879 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 NUDT5Q9UKK9 219 aa12.99□□□□□ -0.33
SPTBN2-201ENST00000309996 A0A087WXM4 84 aa12.98□□□□□ -0.33
SPTBN2-201ENST00000309996 C15orf38-AP3S2A0A0A6YYH1 394 aa12.98□□□□□ -0.33
SPTBN2-201ENST00000309996 GDI2P50395 445 aaKnown RBP12.98□□□□□ -0.33
SPTBN2-201ENST00000309996 TOP3AQ13472 1001 aaPredicted RBP12.98□□□□□ -0.33
SPTBN2-201ENST00000309996 SLC39A12Q504Y0 691 aa12.98□□□□□ -0.33
SPTBN2-201ENST00000309996 TAS1R3Q7RTX0 852 aa12.98□□□□□ -0.33
SPTBN2-201ENST00000309996 ARPINQ7Z6K5 226 aa12.98□□□□□ -0.33
SPTBN2-201ENST00000309996 BSNDQ8WZ55 320 aa12.98□□□□□ -0.33
SPTBN2-201ENST00000309996 MMADHCQ9H3L0 296 aaPredicted RBP12.98□□□□□ -0.33
SPTBN2-201ENST00000309996 CNTNAP5Q8WYK1 1306 aa12.98□□□□□ -0.33
SPTBN2-201ENST00000309996 PRKAR2AP13861 404 aaKnown RBP12.98□□□□□ -0.33
SPTBN2-201ENST00000309996 TCF4P15884 667 aa12.98□□□□□ -0.33
SPTBN2-201ENST00000309996 ARFIP1P53367 373 aa12.98□□□□□ -0.33
SPTBN2-201ENST00000309996 CDC42P60953 191 aa12.98□□□□□ -0.33
SPTBN2-201ENST00000309996 NRF1Q16656 503 aa12.98□□□□□ -0.33
SPTBN2-201ENST00000309996 PHYKPLQ8IUZ5 450 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms