RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 ADCYAP1R1P41586 468 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 TMEM44Q2T9K0 475 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 TRMT5Q32P41 509 aaKnown RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 TMEM259Q4ZIN3 620 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 XKR4Q5GH76 650 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 TAPT1Q6NXT6 567 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 MACC1Q6ZN28 852 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 TMC3Q7Z5M5 1100 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 RPAINQ86UA6 219 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 DNAAF5Q86Y56 855 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 COLGALT1Q8NBJ5 622 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 IL12RB2Q99665 862 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 AIF1LQ9BQI0 150 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 PRRG4Q9BZD6 226 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 DCLRE1BQ9H816 532 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 KIAA1217Q5T5P2 1943 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 ZNF318Q5VUA4 2279 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 PHRF1Q9P1Y6 1649 aaKnown RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 CAMTA1Q9Y6Y1 1673 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 TMX2-CTNND1H3BSU7 103 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 MAGEB3O15480 346 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 POP4O95707 220 aaKnown RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 VIPP01282 170 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 SLC35G6P0C7Q6 338 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 CCNB1P14635 433 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 STAT5AP42229 794 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 NSG1P42857 185 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 PCYT1AP49585 367 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 CLCN6P51797 869 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 MAPK10P53779 464 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 TAS2R50P59544 299 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 STXBP1P61764 594 aaKnown RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 ACSM2AQ08AH3 577 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 NR1D2Q14995 579 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 NDUFAF6Q330K2 333 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 ZACNQ401N2 412 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 COLEC12Q5KU26 742 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 ACSM2BQ68CK6 577 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 JAMLQ86YT9 394 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 FAM126BQ8IXS8 530 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 BHMTQ93088 406 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 SLC38A2Q96QD8 506 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 ABCB6Q9NP58 842 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 DIABLOQ9NR28 239 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 USE1Q9NZ43 259 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 RAPGEFL1Q9UHV5 662 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 DCTN4Q9UJW0 460 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 RUVBL2Q9Y230 463 aaKnown RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 TPRKBQ9Y3C4 175 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 TCRBV5S4A2TA0A5A2 114 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 DDTLA6NHG4 134 aaPredicted RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 DNM1LO00429 736 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 LGR5O75473 907 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 JCHAINP01591 159 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 KITP10721 976 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 AKT2P31751 481 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 ITIH4Q14624 930 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 RASA2Q15283 850 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 TAB1Q15750 504 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 BRAT1Q6PJG6 821 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 MILR1Q7Z6M3 343 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 CTU1Q7Z7A3 348 aaKnown RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 CELF5Q8N6W0 485 aaKnown RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 FAM98AQ8NCA5 519 aaKnown RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 SNIP1Q8TAD8 396 aaKnown RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 UHMK1Q8TAS1 419 aaKnown RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 RAB7BQ96AH8 199 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 KIAA1143Q96AT1 154 aaPredicted RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 THAP11Q96EK4 314 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 MED8Q96G25 268 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 MAGEB18Q96M61 343 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 ACO2Q99798 780 aaKnown RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 CALML5Q9NZT1 146 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 C19orf25Q9UFG5 118 aaPredicted RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 ZNF214Q9UL59 606 aaPredicted RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 PADI2Q9Y2J8 665 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 POLR1DQ9Y2S0 133 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 PCDHGB5Q9Y5G0 923 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 UBIAD1Q9Y5Z9 338 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 OR5K4A6NMS3 321 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 KCNJ13O60928 360 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 SYPP08247 313 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 SMIM10L2AP0DMW4 78 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 SMIM10L2BP0DMW5 78 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 VAV1P15498 845 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 IDSP22304 550 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 RCVRNP35243 200 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 PBX3P40426 434 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 MDH1P40925 334 aaKnown RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 SLC29A2Q14542 456 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 MAPK11Q15759 364 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 SLC39A12Q504Y0 691 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 PDCD4Q53EL6 469 aaKnown RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 AP1ARQ63HQ0 302 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 C12orf50Q8NA57 414 aaPredicted RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 SLC2A14Q8TDB8 520 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 C15orf40Q8WUR7 153 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 AP3S1Q92572 193 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 ART5Q96L15 291 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms