RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 NT5MQ9NPB1 228 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 SEPT10Q9P0V9 454 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 USP36Q9P275 1121 aaKnown RBP9.22□□□□□ -0.93
PDE4D-201ENST00000309641 EFR3BQ9Y2G0 817 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 JRKLQ9Y4A0 524 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 ZFHX2Q9C0A1 2572 aaPredicted RBP9.22□□□□□ -0.93
PDE4D-201ENST00000309641 IGHV1OR15-9A0A0B4J2B8 117 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 KPNA3O00505 521 aaPredicted RBP9.22□□□□□ -0.93
PDE4D-201ENST00000309641 ZNF185O15231 689 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 TJP3O95049 919 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 GSRP00390 522 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 HLA-DQB2P05538 268 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 C7P10643 843 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 CR2P20023 1033 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 ACSL1P33121 698 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 MMP13P45452 471 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 RECQLP46063 649 aaPredicted RBP9.22□□□□□ -0.93
PDE4D-201ENST00000309641 SCNN1BP51168 640 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 SNRPD1P62314 119 aaKnown RBP9.22□□□□□ -0.93
PDE4D-201ENST00000309641 WASHC5Q12768 1159 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 HNRNPDQ14103 355 aaKnown RBP9.22□□□□□ -0.93
PDE4D-201ENST00000309641 SIX1Q15475 284 aaPredicted RBP9.22□□□□□ -0.93
PDE4D-201ENST00000309641 LPAL2Q16609 132 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 LRRC73Q5JTD7 316 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 SLC13A5Q86YT5 568 aaPredicted RBP9.22□□□□□ -0.93
PDE4D-201ENST00000309641 LRRC49Q8IUZ0 686 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 DEFB119Q8N690 84 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 TEX26Q8N6G2 289 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 CASKIN2Q8WXE0 1202 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 GDAP1L1Q96MZ0 367 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 ZNF599Q96NL3 588 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 NEUROG2Q9H2A3 272 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 ITM2CQ9NQX7 267 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 KCND1Q9NSA2 647 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 RBM22Q9NW64 420 aaKnown RBP eCLIP9.22□□□□□ -0.93
PDE4D-201ENST00000309641 FBXL12Q9NXK8 326 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 SEPT3Q9UH03 358 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 IL36AQ9UHA7 158 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 TTLL3Q9Y4R7 772 aa9.22□□□□□ -0.93
PDE4D-201ENST00000309641 CCDC163A0A0D9SF12 145 aa9.21□□□□□ -0.93
PDE4D-201ENST00000309641 F5H423 210 aaPredicted RBP9.21□□□□□ -0.93
PDE4D-201ENST00000309641 CEP104O60308 925 aa9.21□□□□□ -0.93
PDE4D-201ENST00000309641 LILRB5O75023 590 aa9.21□□□□□ -0.93
PDE4D-201ENST00000309641 RNASEH2AO75792 299 aaKnown RBP9.21□□□□□ -0.93
PDE4D-201ENST00000309641 RPP40O75818 363 aaKnown RBP9.21□□□□□ -0.93
PDE4D-201ENST00000309641 POP4O95707 220 aaKnown RBP9.21□□□□□ -0.93
PDE4D-201ENST00000309641 IGSF6O95976 241 aa9.21□□□□□ -0.93
PDE4D-201ENST00000309641 DNTTP04053 509 aa9.21□□□□□ -0.93
PDE4D-201ENST00000309641 UGT2B4P06133 528 aa9.21□□□□□ -0.93
PDE4D-201ENST00000309641 RBP3P10745 1247 aa9.21□□□□□ -0.93
PDE4D-201ENST00000309641 ACADMP11310 421 aa9.21□□□□□ -0.93
PDE4D-201ENST00000309641 RBL1P28749 1068 aa9.21□□□□□ -0.93
PDE4D-201ENST00000309641 CETN2P41208 172 aa9.21□□□□□ -0.93
PDE4D-201ENST00000309641 EIF3EP60228 445 aaKnown RBP9.21□□□□□ -0.93
PDE4D-201ENST00000309641 DSC2Q02487 901 aa9.21□□□□□ -0.93
PDE4D-201ENST00000309641 NIPAL4Q0D2K0 466 aa9.21□□□□□ -0.93
PDE4D-201ENST00000309641 CNTN1Q12860 1018 aa9.21□□□□□ -0.93
PDE4D-201ENST00000309641 ZNF235Q14590 738 aa9.21□□□□□ -0.93
PDE4D-201ENST00000309641 RFTN1Q14699 578 aaPredicted RBP9.21□□□□□ -0.93
PDE4D-201ENST00000309641 SEL1L2Q5TEA6 688 aa9.21□□□□□ -0.93
PDE4D-201ENST00000309641 KBTBD6Q86V97 674 aa9.21□□□□□ -0.93
PDE4D-201ENST00000309641 ZSWIM9Q86XI8 627 aa9.21□□□□□ -0.93
PDE4D-201ENST00000309641 CAMK1DQ8IU85 385 aa9.21□□□□□ -0.93
PDE4D-201ENST00000309641 PLPP6Q8IY26 295 aa9.21□□□□□ -0.93
PDE4D-201ENST00000309641 HDDC3Q8N4P3 179 aa9.21□□□□□ -0.93
PDE4D-201ENST00000309641 TFB1MQ8WVM0 346 aaKnown RBP9.21□□□□□ -0.93
PDE4D-201ENST00000309641 C1orf54Q8WWF1 131 aa9.21□□□□□ -0.93
PDE4D-201ENST00000309641 TOE1Q96GM8 510 aaKnown RBP9.21□□□□□ -0.93
PDE4D-201ENST00000309641 KLHL32Q96NJ5 620 aa9.21□□□□□ -0.93
PDE4D-201ENST00000309641 AGAP3Q96P47 875 aa9.21□□□□□ -0.93
PDE4D-201ENST00000309641 IL12RB2Q99665 862 aa9.21□□□□□ -0.93
PDE4D-201ENST00000309641 MGME1Q9BQP7 344 aa9.21□□□□□ -0.93
PDE4D-201ENST00000309641 PABPC3Q9H361 631 aaKnown RBP9.21□□□□□ -0.93
PDE4D-201ENST00000309641 NOD2Q9HC29 1040 aa9.21□□□□□ -0.93
PDE4D-201ENST00000309641 DNPEPQ9ULA0 475 aa9.21□□□□□ -0.93
PDE4D-201ENST00000309641 GOLGA6L9A6NEM1 432 aa9.21□□□□□ -0.94
PDE4D-201ENST00000309641 H7C0C1 242 aa9.21□□□□□ -0.94
PDE4D-201ENST00000309641 PPP1R12AO14974 1030 aaPredicted RBP9.21□□□□□ -0.94
PDE4D-201ENST00000309641 ALOX15BO15296 676 aa9.21□□□□□ -0.94
PDE4D-201ENST00000309641 ZBTB24O43167 697 aaPredicted RBP9.21□□□□□ -0.94
PDE4D-201ENST00000309641 RNASEH1O60930 286 aaKnown RBP9.21□□□□□ -0.94
PDE4D-201ENST00000309641 FGGP02679 453 aa9.21□□□□□ -0.94
PDE4D-201ENST00000309641 ITIH2P19823 946 aa9.21□□□□□ -0.94
PDE4D-201ENST00000309641 C5AR1P21730 350 aa9.21□□□□□ -0.94
PDE4D-201ENST00000309641 PTPN3P26045 913 aa9.21□□□□□ -0.94
PDE4D-201ENST00000309641 ATP5OP48047 213 aa9.21□□□□□ -0.94
PDE4D-201ENST00000309641 RENBPP51606 427 aa9.21□□□□□ -0.94
PDE4D-201ENST00000309641 PTPRRQ15256 657 aa9.21□□□□□ -0.94
PDE4D-201ENST00000309641 USP39Q53GS9 565 aaKnown RBP9.21□□□□□ -0.94
PDE4D-201ENST00000309641 SLC45A4Q5BKX6 768 aa9.21□□□□□ -0.94
PDE4D-201ENST00000309641 TIGD7Q6NT04 549 aaPredicted RBP9.21□□□□□ -0.94
PDE4D-201ENST00000309641 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.21□□□□□ -0.94
PDE4D-201ENST00000309641 SRLQ86TD4 932 aa9.21□□□□□ -0.94
PDE4D-201ENST00000309641 METTL3Q86U44 580 aaKnown RBP9.21□□□□□ -0.94
PDE4D-201ENST00000309641 TMIEQ8NEW7 156 aa9.21□□□□□ -0.94
PDE4D-201ENST00000309641 SLC35B2Q8TB61 432 aa9.21□□□□□ -0.94
PDE4D-201ENST00000309641 ARRDC2Q8TBH0 407 aa9.21□□□□□ -0.94
PDE4D-201ENST00000309641 GANCQ8TET4 914 aa9.21□□□□□ -0.94
PDE4D-201ENST00000309641 GAB3Q8WWW8 586 aa9.21□□□□□ -0.94
PDE4D-201ENST00000309641 ATOH1Q92858 354 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms