RNA–Protein interactions for RNA: ENST00000309052.8

LCLAT1-201, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene LCLAT1, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-201ENST00000309052 ADGRF1Q5T601 910 aa8.71□□□□□ -1.02
LCLAT1-201ENST00000309052 N4BP2L1Q5TBK1 243 aaPredicted RBP8.71□□□□□ -1.02
LCLAT1-201ENST00000309052 RPS27LQ71UM5 84 aaKnown RBP8.71□□□□□ -1.02
LCLAT1-201ENST00000309052 ITIH5Q86UX2 942 aa8.71□□□□□ -1.02
LCLAT1-201ENST00000309052 GANCQ8TET4 914 aa8.71□□□□□ -1.02
LCLAT1-201ENST00000309052 HAPLN3Q96S86 360 aa8.71□□□□□ -1.02
LCLAT1-201ENST00000309052 C11orf84Q9BUA3 381 aaPredicted RBP8.71□□□□□ -1.02
LCLAT1-201ENST00000309052 MTO1Q9Y2Z2 717 aaKnown RBP8.71□□□□□ -1.02
LCLAT1-201ENST00000309052 CNOT1A5YKK6 2376 aaKnown RBP8.71□□□□□ -1.02
LCLAT1-201ENST00000309052 HACD1B0YJ81 288 aa8.71□□□□□ -1.02
LCLAT1-201ENST00000309052 SCAMP1O15126 338 aa8.71□□□□□ -1.02
LCLAT1-201ENST00000309052 FGF10O15520 208 aaPredicted RBP8.71□□□□□ -1.02
LCLAT1-201ENST00000309052 LYPLA1O75608 230 aaPredicted RBP8.71□□□□□ -1.02
LCLAT1-201ENST00000309052 RHOQP17081 205 aa8.71□□□□□ -1.02
LCLAT1-201ENST00000309052 GEMP55040 296 aa8.71□□□□□ -1.02
LCLAT1-201ENST00000309052 GPM6BQ13491 265 aa8.71□□□□□ -1.02
LCLAT1-201ENST00000309052 RARS2Q5T160 578 aaKnown RBP8.71□□□□□ -1.02
LCLAT1-201ENST00000309052 DCBLD1Q8N8Z6 715 aa8.71□□□□□ -1.02
LCLAT1-201ENST00000309052 ACVR1CQ8NER5 493 aa8.71□□□□□ -1.02
LCLAT1-201ENST00000309052 WFDC5Q8TCV5 224 aa8.71□□□□□ -1.02
LCLAT1-201ENST00000309052 NUDCD1Q96RS6 583 aa8.71□□□□□ -1.02
LCLAT1-201ENST00000309052 RAD9AQ99638 391 aa8.71□□□□□ -1.02
LCLAT1-201ENST00000309052 PKMYT1Q99640 499 aa8.71□□□□□ -1.02
LCLAT1-201ENST00000309052 POLR1EQ9GZS1 481 aaKnown RBP8.71□□□□□ -1.02
LCLAT1-201ENST00000309052 ZDHHC6Q9H6R6 413 aa8.71□□□□□ -1.02
LCLAT1-201ENST00000309052 SEC16AO15027 2179 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 MATN3O15232 486 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 TBC1D4O60343 1298 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 AP2A1O95782 977 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 COL6A1P12109 1028 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 PSEN1P49768 467 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 MGAT5Q09328 741 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 NIPAL4Q0D2K0 466 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 GALNT2Q10471 571 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 ITGA9Q13797 1035 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 PAFAH1B3Q15102 231 aaKnown RBP8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 SHHQ15465 462 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 CCDC85BQ15834 202 aaPredicted RBP8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 TMEM240Q5SV17 173 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 SLC8B1Q6J4K2 584 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 LIMS2Q7Z4I7 341 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 TMEM25Q86YD3 366 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 APCDD1Q8J025 514 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 ZNF419Q96HQ0 510 aaPredicted RBP8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 DNAJC1Q96KC8 554 aaKnown RBP8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 TMEM175Q9BSA9 504 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 FRMD8P1Q9BZ68 369 aaPredicted RBP8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 UBXN6Q9BZV1 441 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 GOLGA8QA0A0J9YX86 632 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 GOLGA8OA6NCC3 632 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 GOLGA8NF8WBI6 632 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 MTSS1O43312 755 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 FOXN2P32314 431 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 PPM1FP49593 454 aaPredicted RBP8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 PABPC1LQ4VXU2 614 aaKnown RBP8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 HABP4Q5JVS0 413 aaKnown RBP8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 TTC39BQ5VTQ0 682 aaPredicted RBP8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 ESAMQ96AP7 390 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 TXLNGYQ9BZA5 131 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 A0A096LPK6 155 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 TRAV19A0A0A6YYK7 116 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 MUSKO15146 869 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 STX7O15400 261 aaKnown RBP8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 SMAD6O43541 496 aaKnown RBP8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 HMGA1P17096 107 aaKnown RBP8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 SLC12A1Q13621 1099 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 TIGD7Q6NT04 549 aaPredicted RBP8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 TBC1D1Q86TI0 1168 aaPredicted RBP8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 OR4K2Q8NGD2 314 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 HDAC11Q96DB2 347 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 PLCD4Q9BRC7 762 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 SLC46A2Q9BY10 475 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 GBA3Q9H227 469 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 EBF3Q9H4W6 596 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 FAM124BQ9H5Z6 455 aaPredicted RBP8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 FAM53CQ9NYF3 392 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 CD84Q9UIB8 345 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 ASCC3Q8N3C0 2202 aaKnown RBP8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 NEMP2A6NFY4 417 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 DIAPH2O60879 1101 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 UGT2B4P06133 528 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 NCF2P19878 526 aaPredicted RBP8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 CHRM3P20309 590 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 SOX11P35716 441 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 SCNN1AP37088 669 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 GSCP56915 257 aaPredicted RBP8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 IRF9Q00978 393 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 DSG1Q02413 1049 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 SEMA5AQ13591 1074 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 PPP2R2DQ66LE6 453 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 NEPROQ6NW34 567 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 LZTR1Q8N653 840 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 OLFM3Q96PB7 478 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 MYOCQ99972 504 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 OSBPL2Q9H1P3 480 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 CLIC5Q9NZA1 410 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.7□□□□□ -1.029e-7■■■■□ 19.5
LCLAT1-201ENST00000309052 TRHDEQ9UKU6 1024 aa8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 RRP15Q9Y3B9 282 aaKnown RBP8.7□□□□□ -1.02
LCLAT1-201ENST00000309052 MYO10Q9HD67 2058 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms