RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 MAN1A2O60476 641 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 BAIAP3O94812 1187 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 ADSLP30566 484 aaPredicted RBP13.19□□□□□ -0.3
TRIM35-201ENST00000305364 TUBB3Q13509 450 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 REP15Q6BDI9 236 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 EFCAB12Q6NXP0 572 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 STK32CQ86UX6 486 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 QKIQ96PU8 341 aaKnown RBP eCLIP13.19□□□□□ -0.3
TRIM35-201ENST00000305364 PTPRHQ9HD43 1115 aa13.19□□□□□ -0.3
TRIM35-201ENST00000305364 DDX28Q9NUL7 540 aaKnown RBP13.19□□□□□ -0.3
TRIM35-201ENST00000305364 GFAPP14136 432 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 KCNA2P16389 499 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 NFKBIAP25963 317 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 L1CAMP32004 1257 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 CDH5P33151 784 aaPredicted RBP13.18□□□□□ -0.3
TRIM35-201ENST00000305364 FRG1Q14331 258 aaKnown RBP13.18□□□□□ -0.3
TRIM35-201ENST00000305364 ZNF460Q14592 562 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 TMEM53Q6P2H8 277 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 SFRP1Q8N474 314 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 FSTL5Q8N475 847 aaPredicted RBP13.18□□□□□ -0.3
TRIM35-201ENST00000305364 FIBCD1Q8N539 461 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 SLC7A14Q8TBB6 771 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 RNF139Q8WU17 664 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 BRD8Q9H0E9 1235 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 MAST2Q6P0Q8 1798 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 FAM95CA0A1B0GW59 222 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 FUOMA2VDF0 154 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 C7orf72A4D263 438 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 MFSD11O43934 449 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 CILPO75339 1184 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 PMPCBO75439 489 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 NPM3O75607 178 aaKnown RBP13.18□□□□□ -0.3
TRIM35-201ENST00000305364 FCGR1AP12314 374 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 HADHAP40939 763 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 LSM3P62310 102 aaKnown RBP13.18□□□□□ -0.3
TRIM35-201ENST00000305364 MERTKQ12866 999 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 KIZQ2M2Z5 673 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 AGAP9Q5VTM2 703 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 PMF1Q6P1K2 205 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 ZYG11AQ6WRX3 759 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 DNAJB14Q8TBM8 379 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 CPB2Q96IY4 423 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 NOL6Q9H6R4 1146 aaKnown RBP13.18□□□□□ -0.3
TRIM35-201ENST00000305364 NDUFAF1Q9Y375 327 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 HMX2A2RU54 273 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 VWA5AO00534 786 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 KCNH1O95259 989 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 PRKCQQ04759 706 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 POLD3Q15054 466 aaPredicted RBP13.18□□□□□ -0.3
TRIM35-201ENST00000305364 CARTPTQ16568 116 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 AASDHQ4L235 1098 aaPredicted RBP13.18□□□□□ -0.3
TRIM35-201ENST00000305364 PPP1R26Q5T8A7 1209 aaPredicted RBP13.18□□□□□ -0.3
TRIM35-201ENST00000305364 CHSY3Q70JA7 882 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 PIWIL4Q7Z3Z4 852 aaKnown RBP13.18□□□□□ -0.3
TRIM35-201ENST00000305364 NXNL1Q96CM4 212 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 IPO11Q9UI26 975 aaKnown RBP13.18□□□□□ -0.3
TRIM35-201ENST00000305364 CROCCQ5TZA2 2017 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 IQCA1LA6NCM1 817 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 KCNK10P57789 538 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 CLDN10P78369 228 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 PCSK7Q16549 785 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 AARS2Q5JTZ9 985 aaKnown RBP13.18□□□□□ -0.3
TRIM35-201ENST00000305364 MFSD4BQ5TF39 518 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 TAF2Q6P1X5 1199 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 ILDR2Q71H61 639 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 NCLNQ969V3 563 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 FANCEQ9HB96 536 aa13.18□□□□□ -0.3
TRIM35-201ENST00000305364 MTF2Q9Y483 593 aaPredicted RBP13.18□□□□□ -0.3
TRIM35-201ENST00000305364 ANKRD12Q6UB98 2062 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 DOT1LQ8TEK3 1739 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 TMEM247A6NEH6 219 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 SNAP91O60641 907 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 PLA2G6O60733 806 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 DLGAP3O95886 979 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 RAB15P59190 212 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 Q3C1V9 767 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 FGD3Q5JSP0 725 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 C6orf183Q5T699 404 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 DEFB106AQ8N104 65 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 C1orf127Q8N9H9 656 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 KCTD14Q9BQ13 255 aaPredicted RBP13.17□□□□□ -0.3
TRIM35-201ENST00000305364 GIN1Q9NXP7 522 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 TUBGCP4Q9UGJ1 667 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.17□□□□□ -0.3
TRIM35-201ENST00000305364 DAB1O75553 588 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 CHEK2O96017 543 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 BROXQ5VW32 411 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 ZNF470Q6ECI4 717 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 ANKRD52Q8NB46 1076 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 RDH11Q8TC12 318 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 SEPT8Q92599 483 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 KCTD15Q96SI1 283 aaPredicted RBP13.17□□□□□ -0.3
TRIM35-201ENST00000305364 CDHR5Q9HBB8 845 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 HOXC10Q9NYD6 342 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 CPSF3Q9UKF6 684 aaKnown RBP13.17□□□□□ -0.3
TRIM35-201ENST00000305364 MFHAS1Q9Y4C4 1052 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.17□□□□□ -0.3
TRIM35-201ENST00000305364 MAGEB16A2A368 324 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 NEMP2A6NFY4 417 aa13.17□□□□□ -0.3
TRIM35-201ENST00000305364 ACKR2O00590 384 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms