RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 EFCAB3Q8N7B9 438 aa16.52■□□□□ 0.24
BRD3-201ENST00000303407 ITFG1Q8TB96 612 aa16.52■□□□□ 0.24
BRD3-201ENST00000303407 TPD52L3Q96J77 140 aa16.52■□□□□ 0.24
BRD3-201ENST00000303407 QKIQ96PU8 341 aaKnown RBP eCLIP16.52■□□□□ 0.24
BRD3-201ENST00000303407 C9orf16Q9BUW7 83 aa16.52■□□□□ 0.24
BRD3-201ENST00000303407 DPEP3Q9H4B8 488 aa16.52■□□□□ 0.24
BRD3-201ENST00000303407 ARL15Q9NXU5 204 aa16.52■□□□□ 0.24
BRD3-201ENST00000303407 TBL1XO60907 577 aa16.52■□□□□ 0.24
BRD3-201ENST00000303407 PCDH8O95206 1070 aa16.52■□□□□ 0.24
BRD3-201ENST00000303407 BPGMP07738 259 aa16.52■□□□□ 0.24
BRD3-201ENST00000303407 SNRPB2P08579 225 aaKnown RBP16.52■□□□□ 0.24
BRD3-201ENST00000303407 TSPAN8P19075 237 aa16.52■□□□□ 0.24
BRD3-201ENST00000303407 HK2P52789 917 aa16.52■□□□□ 0.24
BRD3-201ENST00000303407 PREPLQ4J6C6 727 aaPredicted RBP16.52■□□□□ 0.24
BRD3-201ENST00000303407 ANKRD22Q5VYY1 191 aa16.52■□□□□ 0.24
BRD3-201ENST00000303407 NKD2Q969F2 451 aaPredicted RBP16.52■□□□□ 0.24
BRD3-201ENST00000303407 FCRL2Q96LA5 508 aaPredicted RBP16.52■□□□□ 0.24
BRD3-201ENST00000303407 LRMDAQ9H2I8 198 aa16.52■□□□□ 0.24
BRD3-201ENST00000303407 KRCC1Q9NPI7 259 aaPredicted RBP16.52■□□□□ 0.24
BRD3-201ENST00000303407 RGSL1A5PLK6 1076 aa16.52■□□□□ 0.23
BRD3-201ENST00000303407 CLOCKO15516 846 aa16.52■□□□□ 0.23
BRD3-201ENST00000303407 KCNH1O95259 989 aa16.52■□□□□ 0.23
BRD3-201ENST00000303407 PIK3CGP48736 1102 aa16.52■□□□□ 0.23
BRD3-201ENST00000303407 ALDH9A1P49189 494 aa16.52■□□□□ 0.23
BRD3-201ENST00000303407 ZNF572Q7Z3I7 529 aaPredicted RBP16.52■□□□□ 0.23
BRD3-201ENST00000303407 MYRFQ9Y2G1 1151 aa16.52■□□□□ 0.23
BRD3-201ENST00000303407 FAM20BO75063 409 aa16.52■□□□□ 0.23
BRD3-201ENST00000303407 ANPEPP15144 967 aa16.52■□□□□ 0.23
BRD3-201ENST00000303407 TAF5Q15542 800 aa16.52■□□□□ 0.23
BRD3-201ENST00000303407 SLC35G1Q2M3R5 365 aa16.52■□□□□ 0.23
BRD3-201ENST00000303407 BRMS1LQ5PSV4 323 aa16.52■□□□□ 0.23
BRD3-201ENST00000303407 RNASEH2BQ5TBB1 312 aaKnown RBP16.52■□□□□ 0.23
BRD3-201ENST00000303407 PMF1Q6P1K2 205 aa16.52■□□□□ 0.23
BRD3-201ENST00000303407 PACSIN3Q9UKS6 424 aa16.52■□□□□ 0.23
BRD3-201ENST00000303407 TDRKHQ9Y2W6 561 aaKnown RBP16.52■□□□□ 0.23
BRD3-201ENST00000303407 RPTORQ8N122 1335 aa16.51■□□□□ 0.23
BRD3-201ENST00000303407 SCAMP3O14828 347 aaKnown RBP16.51■□□□□ 0.23
BRD3-201ENST00000303407 VNN1O95497 513 aa16.51■□□□□ 0.23
BRD3-201ENST00000303407 CRHR1P34998 444 aa16.51■□□□□ 0.23
BRD3-201ENST00000303407 INHBEP58166 350 aa16.51■□□□□ 0.23
BRD3-201ENST00000303407 SLC1A5Q15758 541 aa16.51■□□□□ 0.23
BRD3-201ENST00000303407 MPP4Q96JB8 637 aa16.51■□□□□ 0.23
BRD3-201ENST00000303407 PLLPQ9Y342 182 aa16.51■□□□□ 0.23
BRD3-201ENST00000303407 H3BMM5 538 aa16.51■□□□□ 0.23
BRD3-201ENST00000303407 HS6ST1O60243 411 aa16.51■□□□□ 0.23
BRD3-201ENST00000303407 SLC16A1P53985 500 aa16.51■□□□□ 0.23
BRD3-201ENST00000303407 MAGED4Q96JG8 741 aa16.51■□□□□ 0.23
BRD3-201ENST00000303407 XPNPEP1Q9NQW7 623 aa16.51■□□□□ 0.23
BRD3-201ENST00000303407 NR2E1Q9Y466 385 aa16.51■□□□□ 0.23
BRD3-201ENST00000303407 MTF2Q9Y483 593 aaPredicted RBP16.51■□□□□ 0.23
BRD3-201ENST00000303407 A0A1W2PQH9 124 aa16.51■□□□□ 0.23
BRD3-201ENST00000303407 ZBTB14O43829 449 aa16.51■□□□□ 0.23
BRD3-201ENST00000303407 KRT8P05787 483 aa16.51■□□□□ 0.23
BRD3-201ENST00000303407 ASPAP45381 313 aa16.51■□□□□ 0.23
BRD3-201ENST00000303407 ANKRD23Q86SG2 305 aa16.51■□□□□ 0.23
BRD3-201ENST00000303407 RP9Q8TA86 221 aaKnown RBP16.51■□□□□ 0.23
BRD3-201ENST00000303407 SPACA6W5XKT8 324 aa16.51■□□□□ 0.23
BRD3-201ENST00000303407 C15orf38-AP3S2A0A0A6YYH1 394 aa16.51■□□□□ 0.23
BRD3-201ENST00000303407 MSI1O43347 362 aaKnown RBP16.51■□□□□ 0.23
BRD3-201ENST00000303407 SERPINB1P30740 379 aa16.51■□□□□ 0.23
BRD3-201ENST00000303407 IKBKEQ14164 716 aa16.51■□□□□ 0.23
BRD3-201ENST00000303407 DET1Q7L5Y6 550 aa16.51■□□□□ 0.23
BRD3-201ENST00000303407 NECAB2Q7Z6G3 386 aa16.51■□□□□ 0.23
BRD3-201ENST00000303407 ARPINQ7Z6K5 226 aa16.51■□□□□ 0.23
BRD3-201ENST00000303407 CCDC185Q8N715 623 aa16.51■□□□□ 0.23
BRD3-201ENST00000303407 ASB8Q9H765 288 aa16.51■□□□□ 0.23
BRD3-201ENST00000303407 RCOR3Q9P2K3 495 aaPredicted RBP16.51■□□□□ 0.23
BRD3-201ENST00000303407 BTRCQ9Y297 605 aa16.51■□□□□ 0.23
BRD3-201ENST00000303407 PEX11AO75192 247 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 GBE1Q04446 702 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 NRF1Q16656 503 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 REPS1Q96D71 796 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 BBS2Q9BXC9 721 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 ARL8BQ9NVJ2 186 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 KLQ9UEF7 1012 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 INVSQ9Y283 1065 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 PIRTP0C851 137 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 EPHA3P29320 983 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 TTPAP49638 278 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 PSME3P61289 254 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 SPPL2AQ8TCT8 520 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 ACTRT2Q8TDY3 377 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 USE1Q9NZ43 259 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 HDAC3O15379 428 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 PEX1O43933 1283 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 UNGP13051 313 aaPredicted RBP16.5■□□□□ 0.23
BRD3-201ENST00000303407 SOX6P35712 828 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 RFX3P48380 749 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 SPIRE1Q08AE8 756 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 ATRNL1Q5VV63 1379 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 ADGRD1Q6QNK2 874 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 ISLR2Q6UXK2 745 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 TBCDQ9BTW9 1192 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 FTHL17Q9BXU8 183 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 ZCCHC2Q9C0B9 1178 aaKnown RBP16.5■□□□□ 0.23
BRD3-201ENST00000303407 GRHL1Q9NZI5 618 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 HNRNPLP14866 589 aaKnown RBP eCLIP16.5■□□□□ 0.23
BRD3-201ENST00000303407 POLR2EP19388 210 aaKnown RBP16.5■□□□□ 0.23
BRD3-201ENST00000303407 S100A3P33764 101 aa16.5■□□□□ 0.23
BRD3-201ENST00000303407 TRIM16LQ309B1 348 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms