RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 ABCB8Q9NUT2 735 aa13.17□□□□□ -0.3
CCDC7-202ENST00000302316 PIAS1O75925 651 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 CD160O95971 181 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 TYRP14679 529 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 HOXB8P17481 243 aaPredicted RBP13.16□□□□□ -0.3
CCDC7-202ENST00000302316 GEMIN4P57678 1058 aaKnown RBP13.16□□□□□ -0.3
CCDC7-202ENST00000302316 CYTH1Q15438 398 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 PLEKHG6Q3KR16 790 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 INO80DQ53TQ3 878 aaPredicted RBP13.16□□□□□ -0.3
CCDC7-202ENST00000302316 RETSATQ6NUM9 610 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 RIBC1Q8N443 379 aaPredicted RBP13.16□□□□□ -0.3
CCDC7-202ENST00000302316 ACDQ96AP0 544 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 TADA1Q96BN2 335 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 LRRC3BQ96PB8 259 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 PPCSQ9HAB8 311 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 DUS2Q9NX74 493 aaKnown RBP13.16□□□□□ -0.3
CCDC7-202ENST00000302316 GDE1Q9NZC3 331 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 TBK1Q9UHD2 729 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 MYO9BQ13459 2157 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 POLBP06746 335 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 SERPINF2P08697 491 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 GCAP28676 217 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 HLA-FP30511 346 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 CHRNA4P43681 627 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 RGRP47804 291 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 SLC12A1Q13621 1099 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 IHHQ14623 411 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 CRYMQ14894 314 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 KBTBD12Q3ZCT8 623 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 STEAP4Q687X5 459 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 DENND5AQ6IQ26 1287 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 RANBP10Q6VN20 620 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 TDRPQ86YL5 185 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 RNF135Q8IUD6 432 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 ADGRG2Q8IZP9 1017 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 SLC25A41Q8N5S1 370 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 ZNF557Q8N988 423 aaPredicted RBP13.16□□□□□ -0.3
CCDC7-202ENST00000302316 FAM76AQ8TAV0 307 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 OSCP1Q8WVF1 389 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 PAFAH2Q99487 392 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 MARK1Q9P0L2 795 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 PSMC3IPQ9P2W1 217 aaPredicted RBP13.16□□□□□ -0.3
CCDC7-202ENST00000302316 FETUBQ9UGM5 382 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 SLC24A2Q9UI40 661 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 RPS6KL1Q9Y6S9 549 aa13.16□□□□□ -0.3
CCDC7-202ENST00000302316 ATP5DP30049 168 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 SCNN1BP51168 640 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 GYS2P54840 703 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 MAGOHP61326 146 aaKnown RBP13.15□□□□□ -0.3
CCDC7-202ENST00000302316 RHOAP61586 193 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 ADAM15Q13444 863 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 TMED2Q15363 201 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 PITRM1Q5JRX3 1037 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 CES5AQ6NT32 575 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 TRMT10BQ6PF06 316 aaKnown RBP13.15□□□□□ -0.3
CCDC7-202ENST00000302316 EP400NLQ6ZTU2 488 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 BPIFB1Q8TDL5 484 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 ZNF669Q96BR6 464 aaPredicted RBP13.15□□□□□ -0.3
CCDC7-202ENST00000302316 TLCD1Q96CP7 247 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 IFT43Q96FT9 208 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 NOD2Q9HC29 1040 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 SCUBE2Q9NQ36 999 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 LGALS13Q9UHV8 139 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 INTS6Q9UL03 887 aaKnown RBP13.15□□□□□ -0.3
CCDC7-202ENST00000302316 FCF1Q9Y324 198 aaKnown RBP13.15□□□□□ -0.3
CCDC7-202ENST00000302316 REV3LO60673 3130 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 INSIG1O15503 277 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 MT-CO1P00395 513 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 CR2P20023 1033 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 NR1D1P20393 614 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 PRKCHP24723 683 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 HPDP32754 393 aaPredicted RBP13.15□□□□□ -0.3
CCDC7-202ENST00000302316 SERPINH1P50454 418 aaKnown RBP13.15□□□□□ -0.3
CCDC7-202ENST00000302316 POU6F1Q14863 301 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 SPANXN3Q5MJ09 141 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 ATAT1Q5SQI0 421 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 TRIM68Q6AZZ1 485 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 CES3Q6UWW8 571 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 CTAGE3PQ8IX95 158 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 KIAA1958Q8N8K9 716 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 LMLNQ96KR4 655 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 EURLQ9NYK6 297 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 LMCD1Q9NZU5 365 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 CLEC1BQ9P126 229 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 GGA2Q9UJY4 613 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 CDH7Q9ULB5 785 aa13.15□□□□□ -0.3
CCDC7-202ENST00000302316 MAGEB16A2A368 324 aa13.14□□□□□ -0.31
CCDC7-202ENST00000302316 HEPACAM2A8MVW5 462 aa13.14□□□□□ -0.31
CCDC7-202ENST00000302316 RRP9O43818 475 aaKnown RBP13.14□□□□□ -0.31
CCDC7-202ENST00000302316 TBX10O75333 385 aa13.14□□□□□ -0.31
CCDC7-202ENST00000302316 USP1O94782 785 aa13.14□□□□□ -0.31
CCDC7-202ENST00000302316 CYP17A1P05093 508 aa13.14□□□□□ -0.31
CCDC7-202ENST00000302316 CES1P23141 567 aa13.14□□□□□ -0.31
CCDC7-202ENST00000302316 MSH2P43246 934 aa13.14□□□□□ -0.31
CCDC7-202ENST00000302316 PLK1P53350 603 aa13.14□□□□□ -0.31
CCDC7-202ENST00000302316 CDK18Q07002 472 aa13.14□□□□□ -0.31
CCDC7-202ENST00000302316 DHCR24Q15392 516 aa13.14□□□□□ -0.31
CCDC7-202ENST00000302316 SLC1A5Q15758 541 aa13.14□□□□□ -0.31
CCDC7-202ENST00000302316 SLC14A2Q15849 920 aa13.14□□□□□ -0.31
CCDC7-202ENST00000302316 EML3Q32P44 896 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms