RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 GRID2O43424 1007 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 DLX3O60479 287 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 MGEA5O60502 916 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 PYGLP06737 847 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 OR4Q2P0C623 313 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 ARSAP15289 507 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 PIK3R1P27986 724 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 RPL14P50914 215 aaKnown RBP13.07□□□□□ -0.32
HIF3A-204ENST00000300862 LIN52Q52LA3 116 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 LIPMQ5VYY2 423 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 SEL1L3Q68CR1 1132 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 TAF2Q6P1X5 1199 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 FCRL2Q96LA5 508 aaPredicted RBP13.07□□□□□ -0.32
HIF3A-204ENST00000300862 TSNARE1Q96NA8 513 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 DRC3Q9H069 523 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 FIS1Q9Y3D6 152 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 TRPV2Q9Y5S1 764 aa13.07□□□□□ -0.32
HIF3A-204ENST00000300862 IQCA1LA6NCM1 817 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 HDAC3O15379 428 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 CFLARO15519 480 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 MAFKO60675 156 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 HLA-DQB2P05538 268 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 SPATA31D3P0C874 917 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 ETS2P15036 469 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 RAG1P15918 1043 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 CD52P31358 61 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 BTKQ06187 659 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 CACNB2Q08289 660 aaPredicted RBP13.06□□□□□ -0.32
HIF3A-204ENST00000300862 FRG1Q14331 258 aaKnown RBP13.06□□□□□ -0.32
HIF3A-204ENST00000300862 PCID2Q5JVF3 399 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 RASIP1Q5U651 963 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 SDHAF4Q5VUM1 108 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 SPATA31D4Q6ZUB0 917 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 RPS27LQ71UM5 84 aaKnown RBP13.06□□□□□ -0.32
HIF3A-204ENST00000300862 RNF135Q8IUD6 432 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 LSMEM2Q8N112 164 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 CASP10Q92851 521 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 NDNQ99608 321 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 TRPV6Q9H1D0 765 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 GLOD4Q9HC38 313 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 RBM22Q9NW64 420 aaKnown RBP eCLIP13.06□□□□□ -0.32
HIF3A-204ENST00000300862 RRN3Q9NYV6 651 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 RAP2CQ9Y3L5 183 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 HTTP42858 3142 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 FAM95CA0A1B0GW59 222 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 DDHD2O94830 711 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 FAM163BP0C2L3 166 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 ODC1P11926 461 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 HOXC8P31273 242 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 SLC1A2P43004 574 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 TAS2R39P59534 338 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 SLC12A1Q13621 1099 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 ZNF470Q6ECI4 717 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 LRRC8EQ6NSJ5 796 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 C14orf80Q86SX3 495 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 LINC00523Q86TU6 105 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 ELMO2Q96JJ3 720 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 SUDS3Q9H7L9 328 aaPredicted RBP13.06□□□□□ -0.32
HIF3A-204ENST00000300862 IRAK4Q9NWZ3 460 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 ACOT9Q9Y305 439 aa13.06□□□□□ -0.32
HIF3A-204ENST00000300862 TTC24A2A3L6 582 aaPredicted RBP13.05□□□□□ -0.32
HIF3A-204ENST00000300862 STX16-NPEPL1H3BU86 382 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 IRAK2O43187 625 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 ARCN1P48444 511 aaKnown RBP13.05□□□□□ -0.32
HIF3A-204ENST00000300862 CSRP3P50461 194 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 AQP4P55087 323 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 PKNOX1P55347 436 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 TRIP10Q15642 601 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 ZNF789Q5FWF6 425 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 TSTD2Q5T7W7 516 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 ARMC3Q5W041 872 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 FAM171BQ6P995 826 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 AAGABQ6PD74 315 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 ZNF513Q8N8E2 541 aaPredicted RBP13.05□□□□□ -0.32
HIF3A-204ENST00000300862 C2orf69Q8N8R5 385 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 GDPD5Q8WTR4 605 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 STYXQ8WUJ0 223 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 USP13Q92995 863 aaPredicted RBP13.05□□□□□ -0.32
HIF3A-204ENST00000300862 ITFG2Q969R8 447 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 RCN3Q96D15 328 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 HAPLN3Q96S86 360 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 CCDC28BQ9BUN5 200 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 FSD1LQ9BXM9 530 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 CHST12Q9NRB3 414 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 AAR2Q9Y312 384 aaKnown RBP13.05□□□□□ -0.32
HIF3A-204ENST00000300862 CCL22O00626 93 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 CABYRO75952 493 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 HNRNPLP14866 589 aaKnown RBP eCLIP13.05□□□□□ -0.32
HIF3A-204ENST00000300862 CCNCP24863 283 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 GRIA2P42262 883 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 SLC5A3P53794 718 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 MTTPP55157 894 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 RAB10P61026 200 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 MAXP61244 160 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 COG7P83436 770 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 TAF1CQ15572 869 aaPredicted RBP13.05□□□□□ -0.32
HIF3A-204ENST00000300862 RBM20Q5T481 1227 aaKnown RBP13.05□□□□□ -0.32
HIF3A-204ENST00000300862 BTBD8Q5XKL5 378 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 CNSTQ6PJW8 725 aa13.05□□□□□ -0.32
HIF3A-204ENST00000300862 CD300LGQ6UXG3 332 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms