RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 TXNRD3NBQ6F5E7 133 aa21.5■■□□□ 1.03
SMCO4-201ENST00000298966 C8orf74Q6P047 294 aa21.5■■□□□ 1.03
SMCO4-201ENST00000298966 MFSD7Q6UXD7 560 aa21.5■■□□□ 1.03
SMCO4-201ENST00000298966 MAATS1Q7Z4T9 603 aa21.5■■□□□ 1.03
SMCO4-201ENST00000298966 RAPGEF5Q92565 580 aa21.5■■□□□ 1.03
SMCO4-201ENST00000298966 HSPH1Q92598 858 aa21.5■■□□□ 1.03
SMCO4-201ENST00000298966 IGSF8Q969P0 613 aa21.5■■□□□ 1.03
SMCO4-201ENST00000298966 RNF25Q96BH1 459 aaPredicted RBP21.5■■□□□ 1.03
SMCO4-201ENST00000298966 NMUR1Q9HB89 426 aa21.5■■□□□ 1.03
SMCO4-201ENST00000298966 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.5■■□□□ 1.03
SMCO4-201ENST00000298966 ELOVL2Q9NXB9 296 aa21.5■■□□□ 1.03
SMCO4-201ENST00000298966 RAB21Q9UL25 225 aa21.5■■□□□ 1.03
SMCO4-201ENST00000298966 FZD10Q9ULW2 581 aa21.5■■□□□ 1.03
SMCO4-201ENST00000298966 AP4E1Q9UPM8 1137 aa21.5■■□□□ 1.03
SMCO4-201ENST00000298966 ANKRD6Q9Y2G4 727 aa21.5■■□□□ 1.03
SMCO4-201ENST00000298966 PTPRQQ9UMZ3 2332 aa21.49■■□□□ 1.03
SMCO4-201ENST00000298966 C3orf70A6NLC5 250 aaPredicted RBP21.49■■□□□ 1.03
SMCO4-201ENST00000298966 ATXN7O15265 892 aaPredicted RBP21.49■■□□□ 1.03
SMCO4-201ENST00000298966 PCDHGA12O60330 932 aa21.49■■□□□ 1.03
SMCO4-201ENST00000298966 RHOXF2BP0C7M4 288 aa21.49■■□□□ 1.03
SMCO4-201ENST00000298966 ZFXP17010 805 aaPredicted RBP21.49■■□□□ 1.03
SMCO4-201ENST00000298966 HTR7P34969 479 aa21.49■■□□□ 1.03
SMCO4-201ENST00000298966 GRIA4P48058 902 aa21.49■■□□□ 1.03
SMCO4-201ENST00000298966 FNTAP49354 379 aa21.49■■□□□ 1.03
SMCO4-201ENST00000298966 EIF4EBP2Q13542 120 aaPredicted RBP21.49■■□□□ 1.03
SMCO4-201ENST00000298966 DHX34Q14147 1143 aaKnown RBP21.49■■□□□ 1.03
SMCO4-201ENST00000298966 SMTNL2Q2TAL5 461 aa21.49■■□□□ 1.03
SMCO4-201ENST00000298966 ATP13A4Q4VNC1 1196 aa21.49■■□□□ 1.03
SMCO4-201ENST00000298966 KCNT1Q5JUK3 1230 aa21.49■■□□□ 1.03
SMCO4-201ENST00000298966 WDR93Q6P2C0 686 aa21.49■■□□□ 1.03
SMCO4-201ENST00000298966 SERPINA13PQ6UXR4 307 aa21.49■■□□□ 1.03
SMCO4-201ENST00000298966 LRRC69Q6ZNQ3 347 aa21.49■■□□□ 1.03
SMCO4-201ENST00000298966 TMPRSS12Q86WS5 348 aa21.49■■□□□ 1.03
SMCO4-201ENST00000298966 EDEM1Q92611 657 aa21.49■■□□□ 1.03
SMCO4-201ENST00000298966 NXPE2Q96DL1 559 aa21.49■■□□□ 1.03
SMCO4-201ENST00000298966 P2RY11Q96G91 374 aa21.49■■□□□ 1.03
SMCO4-201ENST00000298966 RHOXF2Q9BQY4 288 aa21.49■■□□□ 1.03
SMCO4-201ENST00000298966 MAK16Q9BXY0 300 aaKnown RBP21.49■■□□□ 1.03
SMCO4-201ENST00000298966 DCLK3Q9C098 648 aa21.49■■□□□ 1.03
SMCO4-201ENST00000298966 CIPCQ9C0C6 399 aa21.49■■□□□ 1.03
SMCO4-201ENST00000298966 C6orf106Q9H6K1 298 aaPredicted RBP21.49■■□□□ 1.03
SMCO4-201ENST00000298966 LRRC19Q9H756 370 aa21.49■■□□□ 1.03
SMCO4-201ENST00000298966 FTSJ1Q9UET6 329 aa21.49■■□□□ 1.03
SMCO4-201ENST00000298966 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.49■■□□□ 1.03
SMCO4-201ENST00000298966 CYBBP04839 570 aa21.48■■□□□ 1.03
SMCO4-201ENST00000298966 H2AFXP16104 143 aaPredicted RBP21.48■■□□□ 1.03
SMCO4-201ENST00000298966 TFE3P19532 575 aaPredicted RBP21.48■■□□□ 1.03
SMCO4-201ENST00000298966 PRKCHP24723 683 aa21.48■■□□□ 1.03
SMCO4-201ENST00000298966 CCR1P32246 355 aa21.48■■□□□ 1.03
SMCO4-201ENST00000298966 ADRA1BP35368 520 aa21.48■■□□□ 1.03
SMCO4-201ENST00000298966 ARL4AP40617 200 aa21.48■■□□□ 1.03
SMCO4-201ENST00000298966 NME3Q13232 169 aa21.48■■□□□ 1.03
SMCO4-201ENST00000298966 CCNG2Q16589 344 aa21.48■■□□□ 1.03
SMCO4-201ENST00000298966 AADACL2Q6P093 401 aa21.48■■□□□ 1.03
SMCO4-201ENST00000298966 DRICH1Q6PGQ1 229 aaPredicted RBP21.48■■□□□ 1.03
SMCO4-201ENST00000298966 BBS12Q6ZW61 710 aa21.48■■□□□ 1.03
SMCO4-201ENST00000298966 TAC4Q86UU9 113 aa21.48■■□□□ 1.03
SMCO4-201ENST00000298966 OR2T3Q8NH03 318 aa21.48■■□□□ 1.03
SMCO4-201ENST00000298966 FAF2Q96CS3 445 aa21.48■■□□□ 1.03
SMCO4-201ENST00000298966 KRT12Q99456 494 aa21.48■■□□□ 1.03
SMCO4-201ENST00000298966 AP1M1Q9BXS5 423 aa21.48■■□□□ 1.03
SMCO4-201ENST00000298966 PARD6BQ9BYG5 372 aa21.48■■□□□ 1.03
SMCO4-201ENST00000298966 WDCPQ9H6R7 721 aa21.48■■□□□ 1.03
SMCO4-201ENST00000298966 PCDH18Q9HCL0 1135 aa21.48■■□□□ 1.03
SMCO4-201ENST00000298966 TM9SF3Q9HD45 589 aa21.48■■□□□ 1.03
SMCO4-201ENST00000298966 PIGVQ9NUD9 493 aa21.48■■□□□ 1.03
SMCO4-201ENST00000298966 ARGLU1Q9NWB6 273 aaPredicted RBP21.48■■□□□ 1.03
SMCO4-201ENST00000298966 TLR6Q9Y2C9 796 aa21.48■■□□□ 1.03
SMCO4-201ENST00000298966 SLCO1B1Q9Y6L6 691 aa21.48■■□□□ 1.03
SMCO4-201ENST00000298966 H0Y8X5 98 aa21.47■■□□□ 1.03
SMCO4-201ENST00000298966 PLK4O00444 970 aa21.47■■□□□ 1.03
SMCO4-201ENST00000298966 C1QL1O75973 258 aa21.47■■□□□ 1.03
SMCO4-201ENST00000298966 ITPKBP27987 946 aa21.47■■□□□ 1.03
SMCO4-201ENST00000298966 ACSL1P33121 698 aa21.47■■□□□ 1.03
SMCO4-201ENST00000298966 COG7P83436 770 aa21.47■■□□□ 1.03
SMCO4-201ENST00000298966 DPYSL3Q14195 570 aa21.47■■□□□ 1.03
SMCO4-201ENST00000298966 FAM131BQ86XD5 332 aa21.47■■□□□ 1.03
SMCO4-201ENST00000298966 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.47■■□□□ 1.03
SMCO4-201ENST00000298966 GRK7Q8WTQ7 553 aa21.47■■□□□ 1.03
SMCO4-201ENST00000298966 LRRC1Q9BTT6 524 aa21.47■■□□□ 1.03
SMCO4-201ENST00000298966 CALN1Q9BXU9 219 aa21.47■■□□□ 1.03
SMCO4-201ENST00000298966 KLHL11Q9NVR0 708 aa21.47■■□□□ 1.03
SMCO4-201ENST00000298966 PCYOX1Q9UHG3 505 aa21.47■■□□□ 1.03
SMCO4-201ENST00000298966 RASAL2Q9UJF2 1139 aa21.47■■□□□ 1.03
SMCO4-201ENST00000298966 H3BRJ5 948 aa21.46■■□□□ 1.03
SMCO4-201ENST00000298966 TIMM44O43615 452 aa21.46■■□□□ 1.03
SMCO4-201ENST00000298966 ZNF189O75820 626 aaPredicted RBP21.46■■□□□ 1.03
SMCO4-201ENST00000298966 KLKB1P03952 638 aa21.46■■□□□ 1.03
SMCO4-201ENST00000298966 L1CAMP32004 1257 aa21.46■■□□□ 1.03
SMCO4-201ENST00000298966 HNF1BP35680 557 aa21.46■■□□□ 1.03
SMCO4-201ENST00000298966 HCAR3P49019 387 aa21.46■■□□□ 1.03
SMCO4-201ENST00000298966 BRD3Q15059 726 aa21.46■■□□□ 1.03
SMCO4-201ENST00000298966 SIX1Q15475 284 aaPredicted RBP21.46■■□□□ 1.03
SMCO4-201ENST00000298966 C6orf118Q5T5N4 469 aa21.46■■□□□ 1.03
SMCO4-201ENST00000298966 ADAT2Q7Z6V5 191 aaKnown RBP21.46■■□□□ 1.03
SMCO4-201ENST00000298966 PRELID2Q8N945 189 aa21.46■■□□□ 1.03
SMCO4-201ENST00000298966 LSM14AQ8ND56 463 aaKnown RBP21.46■■□□□ 1.03
SMCO4-201ENST00000298966 SORCS1Q8WY21 1168 aa21.46■■□□□ 1.03
SMCO4-201ENST00000298966 SLCO2A1Q92959 643 aa21.46■■□□□ 1.03
SMCO4-201ENST00000298966 MAGOHBQ96A72 148 aaKnown RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms