RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 ZBTB48P10074 688 aaPredicted RBP16.65■□□□□ 0.26
SNAPC4-201ENST00000298532 PABPC1P11940 636 aaKnown RBP16.65■□□□□ 0.26
SNAPC4-201ENST00000298532 GRIK3Q13003 919 aa16.65■□□□□ 0.26
SNAPC4-201ENST00000298532 USP39Q53GS9 565 aaKnown RBP16.65■□□□□ 0.26
SNAPC4-201ENST00000298532 DNAJB14Q8TBM8 379 aa16.65■□□□□ 0.26
SNAPC4-201ENST00000298532 SLC44A1Q8WWI5 657 aa16.65■□□□□ 0.26
SNAPC4-201ENST00000298532 ZBTB45Q96K62 511 aaPredicted RBP16.65■□□□□ 0.26
SNAPC4-201ENST00000298532 MRPL57Q9BQC6 102 aaKnown RBP16.65■□□□□ 0.26
SNAPC4-201ENST00000298532 ALG9Q9H6U8 611 aa16.65■□□□□ 0.26
SNAPC4-201ENST00000298532 ROBO3Q96MS0 1386 aa16.65■□□□□ 0.26
SNAPC4-201ENST00000298532 PRRG1O14668 218 aa16.64■□□□□ 0.26
SNAPC4-201ENST00000298532 PRMT2P55345 433 aa16.64■□□□□ 0.26
SNAPC4-201ENST00000298532 KLF10Q13118 480 aa16.64■□□□□ 0.26
SNAPC4-201ENST00000298532 C15orf59Q2T9L4 293 aaPredicted RBP16.64■□□□□ 0.26
SNAPC4-201ENST00000298532 KHDC1Q4VXA5 237 aaKnown RBP16.64■□□□□ 0.26
SNAPC4-201ENST00000298532 NT5DC4Q86YG4 428 aa16.64■□□□□ 0.26
SNAPC4-201ENST00000298532 LRRC57Q8N9N7 239 aa16.64■□□□□ 0.26
SNAPC4-201ENST00000298532 GNEQ9Y223 722 aaKnown RBP16.64■□□□□ 0.26
SNAPC4-201ENST00000298532 DBTP11182 482 aaKnown RBP16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 RFX4Q33E94 735 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 DENND5AQ6IQ26 1287 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 SLC41A1Q8IVJ1 513 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 STAG3L4Q8TBR4 150 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 ATXN3LQ9H3M9 355 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 PTTG2Q9NZH5 202 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 CDH22Q9UJ99 828 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 VAV3Q9UKW4 847 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 CA12O43570 354 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 VTNP04004 478 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 EPB42P16452 691 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 NELFEP18615 380 aaKnown RBP16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 RPS6KA3P51812 740 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 ZNF540Q8NDQ6 660 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 EDEM1Q92611 657 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 MYDGFQ969H8 173 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 TRIM39Q9HCM9 518 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 MIEF1Q9NQG6 463 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 TMEM216Q9P0N5 145 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 GSTK1Q9Y2Q3 226 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 EME2A4GXA9 379 aaPredicted RBP16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 CCDC166P0CW27 439 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 IDH2P48735 452 aaKnown RBP16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 PIK3CGP48736 1102 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 SCNN1BP51168 640 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 USP46P62068 366 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 EFEMP1Q12805 493 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 CAMK2GQ13555 558 aaPredicted RBP16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 ARHGAP36Q6ZRI8 547 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 KIAA0408Q6ZU52 694 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 NEK10Q6ZWH5 1172 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 IKBIPQ70UQ0 350 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 ZBTB46Q86UZ6 589 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 HPS6Q86YV9 775 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 ASZ1Q8WWH4 475 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 COX4I2Q96KJ9 171 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 CCNB1IP1Q9NPC3 277 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 SEMA4BQ9NPR2 832 aaPredicted RBP16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 DDX4Q9NQI0 724 aaKnown RBP16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 SNX15Q9NRS6 342 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 FAM198AQ9UFP1 575 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 SLC12A4Q9UP95 1085 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 TNPO3Q9Y5L0 923 aaKnown RBP16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 GRIN2DO15399 1336 aa16.64■□□□□ 0.25
SNAPC4-201ENST00000298532 H3BRB1 525 aa16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 PSMD10O75832 226 aa16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 PCNAP12004 261 aa16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 ZNF7P17097 686 aaPredicted RBP16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 TAL1P17542 331 aaPredicted RBP16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 FECHP22830 423 aa16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 NAA20P61599 178 aa16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 SPIDRQ14159 915 aa16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 PACS1Q6VY07 963 aa16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 CLPTM1LQ96KA5 538 aa16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 TUT1Q9H6E5 874 aaKnown RBP16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 SSU72Q9NP77 194 aaKnown RBP16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 SALL4Q9UJQ4 1053 aa16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 CCDC182A6NF36 153 aa16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 NADKO95544 446 aaPredicted RBP16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 CLCN5P51795 746 aa16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 HIRAP54198 1017 aaPredicted RBP16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 RPL7AP62424 266 aaKnown RBP16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 PFKFB4Q16877 469 aa16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 C4orf32Q8N8J7 132 aa16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 STARD8Q92502 1023 aa16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 SYT15Q9BQS2 421 aa16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 ZNF670Q9BS34 389 aa16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 TTYH3Q9C0H2 523 aa16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 DSEQ9UL01 958 aa16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 PARP4Q9UKK3 1724 aaKnown RBP16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 RAMP2O60895 175 aa16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 CRHR1P34998 444 aa16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 KCTD19Q17RG1 926 aaPredicted RBP16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 ANKRD23Q86SG2 305 aa16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 GPSM1Q86YR5 675 aa16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 TNS4Q8IZW8 715 aa16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 PTGR2Q8N8N7 351 aaPredicted RBP16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 TNFRSF25Q93038 417 aa16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 POP5Q969H6 163 aaKnown RBP16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 SNRNP25Q9BV90 132 aaKnown RBP16.63■□□□□ 0.25
SNAPC4-201ENST00000298532 EPB41L4BQ9H329 900 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms