RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 PLA2G4EQ3MJ16 856 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 INO80DQ53TQ3 878 aaPredicted RBP16.28■□□□□ 0.2
SSRP1-202ENST00000293880 BROXQ5VW32 411 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 FUCA2Q9BTY2 467 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 AAASQ9NRG9 546 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 KCNK4Q9NYG8 393 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 CCDC59Q9P031 241 aaKnown RBP16.28■□□□□ 0.2
SSRP1-202ENST00000293880 ANKDD1BA6NHY2 528 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 CCNA2P20248 432 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 MMP13P45452 471 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 CDC42P60953 191 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 FSTL1Q12841 308 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 MSLNQ13421 630 aaPredicted RBP16.28■□□□□ 0.2
SSRP1-202ENST00000293880 ATP13A4Q4VNC1 1196 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 OVOS1Q6IE37 1185 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 FAM220AQ7Z4H9 259 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 C10orf107Q8IVU9 208 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 PTGR2Q8N8N7 351 aaPredicted RBP16.28■□□□□ 0.2
SSRP1-202ENST00000293880 UCMAQ8WVF2 138 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 NLNQ9BYT8 704 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 CAB39LQ9H9S4 337 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 SRSF11Q05519 484 aaKnown RBP16.28■□□□□ 0.2
SSRP1-202ENST00000293880 ADHFE1Q8IWW8 467 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 OR4A15Q8NGL6 344 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 KIAA1257Q9ULG3 409 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 ENTPD4Q9Y227 616 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 UNC13BO14795 1591 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 CD3EAPO15446 510 aaKnown RBP16.28■□□□□ 0.2
SSRP1-202ENST00000293880 ANXA6P08133 673 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 CCR3P51677 355 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 SQLEQ14534 574 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 REPS1Q96D71 796 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 SMARCD1Q96GM5 515 aa16.28■□□□□ 0.2
SSRP1-202ENST00000293880 REREQ9P2R6 1566 aa16.27■□□□□ 0.2
SSRP1-202ENST00000293880 ZNF806P0C7X5 589 aa16.27■□□□□ 0.2
SSRP1-202ENST00000293880 NCK1P16333 377 aa16.27■□□□□ 0.2
SSRP1-202ENST00000293880 OCLNQ16625 522 aa16.27■□□□□ 0.2
SSRP1-202ENST00000293880 SETMARQ53H47 684 aaPredicted RBP16.27■□□□□ 0.2
SSRP1-202ENST00000293880 CYP4X1Q8N118 509 aa16.27■□□□□ 0.2
SSRP1-202ENST00000293880 C9P02748 559 aa16.27■□□□□ 0.2
SSRP1-202ENST00000293880 HNRNPLP14866 589 aaKnown RBP eCLIP16.27■□□□□ 0.2
SSRP1-202ENST00000293880 SLC6A3Q01959 620 aa16.27■□□□□ 0.2
SSRP1-202ENST00000293880 ZNF280DQ6N043 979 aa16.27■□□□□ 0.2
SSRP1-202ENST00000293880 PLEKHH3Q7Z736 793 aa16.27■□□□□ 0.2
SSRP1-202ENST00000293880 PNMA5Q96PV4 448 aa16.27■□□□□ 0.2
SSRP1-202ENST00000293880 ING4Q9UNL4 249 aa16.27■□□□□ 0.2
SSRP1-202ENST00000293880 SLC12A4Q9UP95 1085 aa16.27■□□□□ 0.2
SSRP1-202ENST00000293880 PURAQ00577 322 aaKnown RBP16.27■□□□□ 0.19
SSRP1-202ENST00000293880 MED22Q15528 200 aa16.27■□□□□ 0.19
SSRP1-202ENST00000293880 FAM171BQ6P995 826 aa16.27■□□□□ 0.19
SSRP1-202ENST00000293880 CHPFQ8IZ52 775 aa16.27■□□□□ 0.19
SSRP1-202ENST00000293880 SELENOMQ8WWX9 145 aa16.27■□□□□ 0.19
SSRP1-202ENST00000293880 C18orf25Q96B23 403 aaPredicted RBP16.27■□□□□ 0.19
SSRP1-202ENST00000293880 SLC25A23Q9BV35 468 aa16.27■□□□□ 0.19
SSRP1-202ENST00000293880 GSDMCQ9BYG8 508 aa16.27■□□□□ 0.19
SSRP1-202ENST00000293880 KDELR1P24390 212 aa16.27■□□□□ 0.19
SSRP1-202ENST00000293880 RPL4P36578 427 aaKnown RBP16.27■□□□□ 0.19
SSRP1-202ENST00000293880 IFNGR2P38484 337 aa16.27■□□□□ 0.19
SSRP1-202ENST00000293880 SLC12A3P55017 1021 aa16.27■□□□□ 0.19
SSRP1-202ENST00000293880 PFKPQ01813 784 aa16.27■□□□□ 0.19
SSRP1-202ENST00000293880 BCL2L1Q07817 233 aa16.27■□□□□ 0.19
SSRP1-202ENST00000293880 ABRAXAS1Q6UWZ7 409 aa16.27■□□□□ 0.19
SSRP1-202ENST00000293880 CD302Q8IX05 232 aa16.27■□□□□ 0.19
SSRP1-202ENST00000293880 KAT5Q92993 513 aa16.27■□□□□ 0.19
SSRP1-202ENST00000293880 STARD13Q9Y3M8 1113 aa16.27■□□□□ 0.19
SSRP1-202ENST00000293880 DDTLA6NHG4 134 aaPredicted RBP16.27■□□□□ 0.19
SSRP1-202ENST00000293880 ZBTB14O43829 449 aa16.27■□□□□ 0.19
SSRP1-202ENST00000293880 MTA2O94776 668 aa16.27■□□□□ 0.19
SSRP1-202ENST00000293880 IFNA16P05015 189 aa16.27■□□□□ 0.19
SSRP1-202ENST00000293880 S100A1P23297 94 aa16.27■□□□□ 0.19
SSRP1-202ENST00000293880 NRG1Q02297 640 aaPredicted RBP16.27■□□□□ 0.19
SSRP1-202ENST00000293880 BIKQ13323 160 aa16.27■□□□□ 0.19
SSRP1-202ENST00000293880 CNSTQ6PJW8 725 aa16.27■□□□□ 0.19
SSRP1-202ENST00000293880 LRRC17Q8N6Y2 441 aa16.27■□□□□ 0.19
SSRP1-202ENST00000293880 MCOLN3Q8TDD5 553 aa16.27■□□□□ 0.19
SSRP1-202ENST00000293880 DUSP9Q99956 384 aaKnown RBP16.27■□□□□ 0.19
SSRP1-202ENST00000293880 SAR1AQ9NR31 198 aa16.27■□□□□ 0.19
SSRP1-202ENST00000293880 RSL24D1Q9UHA3 163 aaKnown RBP16.27■□□□□ 0.19
SSRP1-202ENST00000293880 GSTK1Q9Y2Q3 226 aa16.27■□□□□ 0.19
SSRP1-202ENST00000293880 PIRTP0C851 137 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 CYP4F8P98187 520 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 QPCTQ16769 361 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 DHDDSQ86SQ9 333 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 ETNPPLQ8TBG4 499 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 RCN3Q96D15 328 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 NAT9Q9BTE0 207 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 MYBL2P10244 700 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 KLRC2P26717 231 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 RENBPP51606 427 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 IL2P60568 153 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 RRP1BQ14684 758 aaKnown RBP16.26■□□□□ 0.19
SSRP1-202ENST00000293880 RAP1GAP2Q684P5 730 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 GLT1D1Q96MS3 346 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 TBC1D10AQ9BXI6 508 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 FAM192AQ9GZU8 254 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 MARCH7Q9H992 704 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 RNPEPL1Q9HAU8 725 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 CDH9Q9ULB4 789 aa16.26■□□□□ 0.19
SSRP1-202ENST00000293880 MTF2Q9Y483 593 aaPredicted RBP16.26■□□□□ 0.19
SSRP1-202ENST00000293880 PCDHB5Q9Y5E4 795 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms