RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 RAB44Q7Z6P3 723 aaPredicted RBP13.56□□□□□ -0.24
SCAF4-201ENST00000286835 OFCC1Q8IZS5 231 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 PCYOX1LQ8NBM8 494 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 OR9I1Q8NGQ6 314 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 GIPC3Q8TF64 312 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 PABPC5Q96DU9 382 aaKnown RBP13.56□□□□□ -0.24
SCAF4-201ENST00000286835 FZD8Q9H461 694 aa13.56□□□□□ -0.24
SCAF4-201ENST00000286835 COPG1Q9Y678 874 aaKnown RBP13.56□□□□□ -0.24
SCAF4-201ENST00000286835 XIRP1Q702N8 1843 aaKnown RBP13.55□□□□□ -0.24
SCAF4-201ENST00000286835 E7ENX8 843 aa13.55□□□□□ -0.24
SCAF4-201ENST00000286835 CLOCKO15516 846 aa13.55□□□□□ -0.24
SCAF4-201ENST00000286835 MT-CYBP00156 380 aaPredicted RBP13.55□□□□□ -0.24
SCAF4-201ENST00000286835 TFPTP0C1Z6 253 aa13.55□□□□□ -0.24
SCAF4-201ENST00000286835 IQCF3P0C7M6 154 aa13.55□□□□□ -0.24
SCAF4-201ENST00000286835 MLNP12872 115 aa13.55□□□□□ -0.24
SCAF4-201ENST00000286835 ADRM1Q16186 407 aa13.55□□□□□ -0.24
SCAF4-201ENST00000286835 ZIK1Q3SY52 487 aaPredicted RBP13.55□□□□□ -0.24
SCAF4-201ENST00000286835 CELF3Q5SZQ8 465 aaKnown RBP13.55□□□□□ -0.24
SCAF4-201ENST00000286835 ZNF280DQ6N043 979 aa13.55□□□□□ -0.24
SCAF4-201ENST00000286835 TIFABQ6ZNK6 161 aa13.55□□□□□ -0.24
SCAF4-201ENST00000286835 ACVR1CQ8NER5 493 aa13.55□□□□□ -0.24
SCAF4-201ENST00000286835 TEPSINQ96N21 525 aa13.55□□□□□ -0.24
SCAF4-201ENST00000286835 VTI1BQ9UEU0 232 aa13.55□□□□□ -0.24
SCAF4-201ENST00000286835 A0A1B0GTW7 788 aa13.55□□□□□ -0.24
SCAF4-201ENST00000286835 SLCO1B7G3V0H7 640 aa13.55□□□□□ -0.24
SCAF4-201ENST00000286835 BAIAP3O94812 1187 aa13.55□□□□□ -0.24
SCAF4-201ENST00000286835 USP17L7P0C7H9 530 aa13.55□□□□□ -0.24
SCAF4-201ENST00000286835 ARRB2P32121 409 aa13.55□□□□□ -0.24
SCAF4-201ENST00000286835 MATKP42679 507 aa13.55□□□□□ -0.24
SCAF4-201ENST00000286835 FCGRTP55899 365 aa13.55□□□□□ -0.24
SCAF4-201ENST00000286835 NAA20P61599 178 aa13.55□□□□□ -0.24
SCAF4-201ENST00000286835 SCN4BQ8IWT1 228 aa13.55□□□□□ -0.24
SCAF4-201ENST00000286835 FTHL17Q9BXU8 183 aa13.55□□□□□ -0.24
SCAF4-201ENST00000286835 ULBP1Q9BZM6 244 aa13.55□□□□□ -0.24
SCAF4-201ENST00000286835 CCL22O00626 93 aa13.55□□□□□ -0.24
SCAF4-201ENST00000286835 CABYRO75952 493 aa13.55□□□□□ -0.24
SCAF4-201ENST00000286835 ARSAP15289 507 aa13.55□□□□□ -0.24
SCAF4-201ENST00000286835 INHBCP55103 352 aa13.55□□□□□ -0.24
SCAF4-201ENST00000286835 PLCL1Q15111 1095 aa13.55□□□□□ -0.24
SCAF4-201ENST00000286835 PATL1Q86TB9 770 aaKnown RBP13.55□□□□□ -0.24
SCAF4-201ENST00000286835 NT5DC4Q86YG4 428 aa13.55□□□□□ -0.24
SCAF4-201ENST00000286835 PRICKLE1Q96MT3 831 aaPredicted RBP13.55□□□□□ -0.24
SCAF4-201ENST00000286835 C1orf232A0A0U1RR37 186 aa13.54□□□□□ -0.24
SCAF4-201ENST00000286835 NCF1BA6NI72 391 aaPredicted RBP13.54□□□□□ -0.24
SCAF4-201ENST00000286835 NCF1CA8MVU1 366 aaPredicted RBP13.54□□□□□ -0.24
SCAF4-201ENST00000286835 JUNP05412 331 aaKnown RBP13.54□□□□□ -0.24
SCAF4-201ENST00000286835 NCF1P14598 390 aaPredicted RBP13.54□□□□□ -0.24
SCAF4-201ENST00000286835 STT3AP46977 705 aa13.54□□□□□ -0.24
SCAF4-201ENST00000286835 HARS2P49590 506 aaKnown RBP13.54□□□□□ -0.24
SCAF4-201ENST00000286835 CAPRIN1Q14444 709 aaKnown RBP13.54□□□□□ -0.24
SCAF4-201ENST00000286835 TARBP2Q15633 366 aaKnown RBP13.54□□□□□ -0.24
SCAF4-201ENST00000286835 OGFRL1Q5TC84 451 aaPredicted RBP13.54□□□□□ -0.24
SCAF4-201ENST00000286835 CLEC4FQ8N1N0 589 aa13.54□□□□□ -0.24
SCAF4-201ENST00000286835 ANKRD52Q8NB46 1076 aa13.54□□□□□ -0.24
SCAF4-201ENST00000286835 MAGEE2Q8TD90 523 aaPredicted RBP13.54□□□□□ -0.24
SCAF4-201ENST00000286835 TRIM15Q9C019 465 aa13.54□□□□□ -0.24
SCAF4-201ENST00000286835 CCDC68Q9H2F9 335 aa13.54□□□□□ -0.24
SCAF4-201ENST00000286835 RECQL4O94761 1208 aa13.54□□□□□ -0.24
SCAF4-201ENST00000286835 CCDC166P0CW27 439 aa13.54□□□□□ -0.24
SCAF4-201ENST00000286835 PSMA4P25789 261 aaKnown RBP13.54□□□□□ -0.24
SCAF4-201ENST00000286835 CPT1AP50416 773 aa13.54□□□□□ -0.24
SCAF4-201ENST00000286835 MYBPC1Q00872 1141 aa13.54□□□□□ -0.24
SCAF4-201ENST00000286835 TRAF2Q12933 501 aa13.54□□□□□ -0.24
SCAF4-201ENST00000286835 NAB1Q13506 487 aa13.54□□□□□ -0.24
SCAF4-201ENST00000286835 ZNF618Q5T7W0 954 aa13.54□□□□□ -0.24
SCAF4-201ENST00000286835 SYPL2Q5VXT5 272 aa13.54□□□□□ -0.24
SCAF4-201ENST00000286835 LDB1Q86U70 411 aaPredicted RBP13.54□□□□□ -0.24
SCAF4-201ENST00000286835 SDCCAG3Q96C92 435 aa13.54□□□□□ -0.24
SCAF4-201ENST00000286835 TINF2Q9BSI4 451 aa13.54□□□□□ -0.24
SCAF4-201ENST00000286835 POLR1BQ9H9Y6 1135 aa13.54□□□□□ -0.24
SCAF4-201ENST00000286835 CRYL1Q9Y2S2 319 aa13.54□□□□□ -0.24
SCAF4-201ENST00000286835 MANSC4A6NHS7 340 aaPredicted RBP13.54□□□□□ -0.24
SCAF4-201ENST00000286835 UGT1A6P19224 532 aa13.54□□□□□ -0.24
SCAF4-201ENST00000286835 SPPL2CQ8IUH8 684 aa13.54□□□□□ -0.24
SCAF4-201ENST00000286835 CBR4Q8N4T8 237 aa13.54□□□□□ -0.24
SCAF4-201ENST00000286835 DDHD1Q8NEL9 900 aa13.54□□□□□ -0.24
SCAF4-201ENST00000286835 ZNF560Q96MR9 790 aa13.54□□□□□ -0.24
SCAF4-201ENST00000286835 TRIM8Q9BZR9 551 aa13.54□□□□□ -0.24
SCAF4-201ENST00000286835 SPAG4Q9NPE6 437 aa13.54□□□□□ -0.24
SCAF4-201ENST00000286835 OXSMQ9NWU1 459 aa13.54□□□□□ -0.24
SCAF4-201ENST00000286835 PKD2L2Q9NZM6 624 aa13.54□□□□□ -0.24
SCAF4-201ENST00000286835 ADAM28Q9UKQ2 775 aa13.54□□□□□ -0.24
SCAF4-201ENST00000286835 MATN2O00339 956 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 TADA2AO75478 443 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 PTPN3P26045 913 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 THPOP40225 353 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 NUP107P57740 925 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 FOXD4Q12950 439 aaPredicted RBP13.53□□□□□ -0.24
SCAF4-201ENST00000286835 MYBPC3Q14896 1274 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 TAZQ16635 292 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 CYP51A1Q16850 503 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 TBC1D25Q3MII6 688 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 PGM2L1Q6PCE3 622 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 GPR142Q7Z601 462 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 TLK2Q86UE8 772 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 ZNF410Q86VK4 478 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 DNAJB14Q8TBM8 379 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 DNAJB3Q8WWF6 145 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 KATNAL1Q9BW62 490 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 ALG9Q9H6U8 611 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms