RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 KIFC1Q9BW19 673 aa13.41□□□□□ -0.26
SLC28A1-201ENST00000286749 GTSE1Q9NYZ3 720 aa13.41□□□□□ -0.26
SLC28A1-201ENST00000286749 FNDC1Q4ZHG4 1894 aaPredicted RBP13.41□□□□□ -0.26
SLC28A1-201ENST00000286749 A0A1B0GTW7 788 aa13.41□□□□□ -0.26
SLC28A1-201ENST00000286749 TRIM38O00635 465 aa13.41□□□□□ -0.26
SLC28A1-201ENST00000286749 CXCL11O14625 94 aa13.41□□□□□ -0.26
SLC28A1-201ENST00000286749 ZNF189O75820 626 aaPredicted RBP13.41□□□□□ -0.26
SLC28A1-201ENST00000286749 NCAM1P13591 858 aa13.41□□□□□ -0.26
SLC28A1-201ENST00000286749 WARSP23381 471 aaKnown RBP13.41□□□□□ -0.26
SLC28A1-201ENST00000286749 INHBCP55103 352 aa13.41□□□□□ -0.26
SLC28A1-201ENST00000286749 RAB10P61026 200 aa13.41□□□□□ -0.26
SLC28A1-201ENST00000286749 APOFQ13790 326 aa13.41□□□□□ -0.26
SLC28A1-201ENST00000286749 PRPSAP1Q14558 356 aa13.41□□□□□ -0.26
SLC28A1-201ENST00000286749 POU6F1Q14863 301 aa13.41□□□□□ -0.26
SLC28A1-201ENST00000286749 NRF1Q16656 503 aa13.41□□□□□ -0.26
SLC28A1-201ENST00000286749 GPRIN1Q7Z2K8 1008 aa13.41□□□□□ -0.26
SLC28A1-201ENST00000286749 AMIGO2Q86SJ2 522 aa13.41□□□□□ -0.26
SLC28A1-201ENST00000286749 SPATA22Q8NHS9 363 aa13.41□□□□□ -0.26
SLC28A1-201ENST00000286749 LENG1Q96BZ8 264 aaPredicted RBP13.41□□□□□ -0.26
SLC28A1-201ENST00000286749 FTHL17Q9BXU8 183 aa13.41□□□□□ -0.26
SLC28A1-201ENST00000286749 SENP6Q9GZR1 1112 aaPredicted RBP13.41□□□□□ -0.26
SLC28A1-201ENST00000286749 DDX18Q9NVP1 670 aaKnown RBP13.41□□□□□ -0.26
SLC28A1-201ENST00000286749 PIN4Q9Y237 131 aaKnown RBP13.41□□□□□ -0.26
SLC28A1-201ENST00000286749 PLXNB2O15031 1838 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 FAM95CA0A1B0GW59 222 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 PDLIM1O00151 329 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 STRNO43815 780 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 CAPNS1P04632 268 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 YBX3P16989 372 aaKnown RBP eCLIP13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 IGFBP6P24592 240 aaPredicted RBP13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 HCAR3P49019 387 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 AIF1P55008 147 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 DAOAP59103 153 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 EML3Q32P44 896 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 KIAA0319Q5VV43 1072 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 WSCD1Q658N2 575 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 SPNS2Q8IVW8 549 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 TXNDC5Q8NBS9 432 aaKnown RBP13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 STON2Q8WXE9 905 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 EMID1Q96A84 441 aaPredicted RBP13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 EME1Q96AY2 570 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 MRPL1Q9BYD6 325 aaKnown RBP13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 BRD8Q9H0E9 1235 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 PCDHAC1Q9H158 963 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 SEMA6AQ9H2E6 1030 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 VTA1Q9NP79 307 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 DMTF1Q9Y222 760 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 NEMP2A6NFY4 417 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 USP17L7P0C7H9 530 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 FAM200BP0CF97 657 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 COL6A2P12110 1019 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 HNRNPLP14866 589 aaKnown RBP eCLIP13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 STMN1P16949 149 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 RANBP1P43487 201 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 PSME3P61289 254 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 MGAT5BQ3V5L5 792 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 CNSTQ6PJW8 725 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 LCA5Q86VQ0 697 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 EDEM1Q92611 657 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 VAT1Q99536 393 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 SLC2A11Q9BYW1 496 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 POMKQ9H5K3 350 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 EPS15L1Q9UBC2 864 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 TMCO1Q9UM00 188 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 PHF24Q9UPV7 400 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 PCDHGA7Q9Y5G6 932 aa13.4□□□□□ -0.26
SLC28A1-201ENST00000286749 PCNTO95613 3336 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 TRPC5OSA6NMA1 111 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 TMCC1O94876 653 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 MT-CYBP00156 380 aaPredicted RBP13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 PENKP01210 267 aaPredicted RBP13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 MMP3P08254 477 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 DARSP14868 501 aaKnown RBP13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 ZNF26P17031 533 aaPredicted RBP13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 PDAP1Q13442 181 aaKnown RBP13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 UGP2Q16851 508 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 INTS6LQ5JSJ4 861 aaKnown RBP13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 PKN3Q6P5Z2 889 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 LINC00523Q86TU6 105 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 CEP70Q8NHQ1 597 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 ASB9Q96DX5 294 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 ELMO2Q96JJ3 720 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 MAELQ96JY0 434 aaKnown RBP13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 OSBPL2Q9H1P3 480 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 MRPL46Q9H2W6 279 aaKnown RBP13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 HSFX1Q9UBD0 423 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 OR12D3Q9UGF7 316 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 C9IYK1 514 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 E7ENX8 843 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 XPOTO43592 962 aaKnown RBP13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 NPHS1O60500 1241 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 LRIG2O94898 1065 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 CSPG5O95196 566 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 HSPA1AP0DMV8 641 aaKnown RBP13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 HSPA1BP0DMV9 641 aaKnown RBP13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 PSMC3P17980 439 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 FGFR3P22607 806 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 USP46P62068 366 aa13.39□□□□□ -0.27
SLC28A1-201ENST00000286749 RALGDSQ12967 914 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms