RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 PNPLA3Q9NST1 481 aa17.3■□□□□ 0.36
SRF-201ENST00000265354 MAP3K20Q9NYL2 800 aaKnown RBP17.3■□□□□ 0.36
SRF-201ENST00000265354 CYTH4Q9UIA0 394 aa17.3■□□□□ 0.36
SRF-201ENST00000265354 PRPF19Q9UMS4 504 aaKnown RBP17.3■□□□□ 0.36
SRF-201ENST00000265354 CILPO75339 1184 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 ZBTB48P10074 688 aaPredicted RBP17.29■□□□□ 0.36
SRF-201ENST00000265354 STT3AP46977 705 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 CCNIQ14094 377 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 ADGRE1Q14246 886 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 ATP6AP1LQ52LC2 224 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 ARHGAP17Q68EM7 881 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 LINC00523Q86TU6 105 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 KCTD15Q96SI1 283 aaPredicted RBP17.29■□□□□ 0.36
SRF-201ENST00000265354 DHX33Q9H6R0 707 aaKnown RBP17.29■□□□□ 0.36
SRF-201ENST00000265354 HPS4Q9NQG7 708 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 LATS2Q9NRM7 1088 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 RNF112Q9ULX5 631 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 TAF1P21675 1872 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 CITO14578 2027 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 DHRS12A0PJE2 317 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 NCK1P16333 377 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 POLD3Q15054 466 aaPredicted RBP17.29■□□□□ 0.36
SRF-201ENST00000265354 TNFAIP8L3Q5GJ75 292 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 RELL1Q8IUW5 271 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 NSMCE2Q96MF7 247 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 BTBD9Q96Q07 612 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 LHX5Q9H2C1 402 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 DPEP3Q9H4B8 488 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 ANXA9O76027 345 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 LINC00032P0C843 101 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 ARF4P18085 180 aaPredicted RBP17.29■□□□□ 0.36
SRF-201ENST00000265354 CES1P23141 567 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 POU4F1Q01851 419 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 DMC1Q14565 340 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 THOC7Q6I9Y2 204 aaKnown RBP17.29■□□□□ 0.36
SRF-201ENST00000265354 SIRPGQ9P1W8 387 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 BOLA2-SMG1P6H3BVE0 249 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 UGT1A6P19224 532 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 AOC1P19801 751 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 NMBRP28336 390 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 RAD23AP54725 363 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 EGFLAMQ63HQ2 1017 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 FNIP1Q8TF40 1166 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 SIGLEC10Q96LC7 697 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 CCDC106Q9BWC9 280 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 OSBPL11Q9BXB4 747 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 NSMCE4AQ9NXX6 385 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 LIMD1Q9UGP4 676 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 BLOC1S6Q9UL45 172 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 PCDHB12Q9Y5F1 795 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 FADS3Q9Y5Q0 445 aa17.29■□□□□ 0.36
SRF-201ENST00000265354 SPATA31C2B4DYI2 1134 aa17.28■□□□□ 0.36
SRF-201ENST00000265354 MAFO75444 373 aaPredicted RBP17.28■□□□□ 0.36
SRF-201ENST00000265354 HGFP14210 728 aa17.28■□□□□ 0.36
SRF-201ENST00000265354 ASPAP45381 313 aa17.28■□□□□ 0.36
SRF-201ENST00000265354 NDUFV1P49821 464 aa17.28■□□□□ 0.36
SRF-201ENST00000265354 BNIP3Q12983 259 aa17.28■□□□□ 0.36
SRF-201ENST00000265354 MYLK3Q32MK0 819 aa17.28■□□□□ 0.36
SRF-201ENST00000265354 TRIM60Q495X7 471 aa17.28■□□□□ 0.36
SRF-201ENST00000265354 AASDHQ4L235 1098 aaPredicted RBP17.28■□□□□ 0.36
SRF-201ENST00000265354 MAP1SQ66K74 1059 aaPredicted RBP17.28■□□□□ 0.36
SRF-201ENST00000265354 FNDC5Q8NAU1 212 aa17.28■□□□□ 0.36
SRF-201ENST00000265354 CANT1Q8WVQ1 401 aa17.28■□□□□ 0.36
SRF-201ENST00000265354 ASB7Q9H672 318 aa17.28■□□□□ 0.36
SRF-201ENST00000265354 H3BRB1 525 aa17.28■□□□□ 0.36
SRF-201ENST00000265354 RGS5O15539 181 aa17.28■□□□□ 0.36
SRF-201ENST00000265354 HS6ST1O60243 411 aa17.28■□□□□ 0.36
SRF-201ENST00000265354 ALDOAP04075 364 aaKnown RBP17.28■□□□□ 0.36
SRF-201ENST00000265354 ITGB6P18564 788 aa17.28■□□□□ 0.36
SRF-201ENST00000265354 ALDH4A1P30038 563 aa17.28■□□□□ 0.36
SRF-201ENST00000265354 CCNG1P51959 295 aa17.28■□□□□ 0.36
SRF-201ENST00000265354 TUT1Q9H6E5 874 aaKnown RBP17.28■□□□□ 0.36
SRF-201ENST00000265354 AAR2Q9Y312 384 aaKnown RBP17.28■□□□□ 0.36
SRF-201ENST00000265354 ATRNL1Q5VV63 1379 aa17.28■□□□□ 0.36
SRF-201ENST00000265354 HSMCR30P0CW71 290 aa17.28■□□□□ 0.36
SRF-201ENST00000265354 RPL10P27635 214 aaKnown RBP17.28■□□□□ 0.36
SRF-201ENST00000265354 FRG1Q14331 258 aaKnown RBP17.28■□□□□ 0.36
SRF-201ENST00000265354 ILDR2Q71H61 639 aa17.28■□□□□ 0.36
SRF-201ENST00000265354 ERO1BQ86YB8 467 aa17.28■□□□□ 0.36
SRF-201ENST00000265354 NT5DC4Q86YG4 428 aa17.28■□□□□ 0.36
SRF-201ENST00000265354 SOX17Q9H6I2 414 aaPredicted RBP17.28■□□□□ 0.36
SRF-201ENST00000265354 SCHIP1Q9P0W5 487 aaPredicted RBP17.28■□□□□ 0.36
SRF-201ENST00000265354 ZDHHC2Q9UIJ5 367 aa17.28■□□□□ 0.36
SRF-201ENST00000265354 FBXO5Q9UKT4 447 aa17.28■□□□□ 0.36
SRF-201ENST00000265354 MTSS1O43312 755 aa17.27■□□□□ 0.36
SRF-201ENST00000265354 H2AFYO75367 372 aaKnown RBP17.27■□□□□ 0.36
SRF-201ENST00000265354 CABYRO75952 493 aa17.27■□□□□ 0.36
SRF-201ENST00000265354 ATXN8OSP0DMR3 200 aa17.27■□□□□ 0.36
SRF-201ENST00000265354 NRG1Q02297 640 aaPredicted RBP17.27■□□□□ 0.36
SRF-201ENST00000265354 GNA12Q03113 381 aa17.27■□□□□ 0.36
SRF-201ENST00000265354 RALGPS2Q86X27 583 aaPredicted RBP17.27■□□□□ 0.36
SRF-201ENST00000265354 CHST13Q8NET6 341 aa17.27■□□□□ 0.36
SRF-201ENST00000265354 ESAMQ96AP7 390 aa17.27■□□□□ 0.36
SRF-201ENST00000265354 TMIGD2Q96BF3 282 aa17.27■□□□□ 0.36
SRF-201ENST00000265354 FAM193BQ96PV7 902 aaPredicted RBP17.27■□□□□ 0.36
SRF-201ENST00000265354 MORF4L1Q9UBU8 362 aa17.27■□□□□ 0.36
SRF-201ENST00000265354 BCLAF3A2AJT9 711 aaKnown RBP17.27■□□□□ 0.36
SRF-201ENST00000265354 CASTOR2A6NHX0 329 aa17.27■□□□□ 0.36
SRF-201ENST00000265354 ZBTB14O43829 449 aa17.27■□□□□ 0.36
SRF-201ENST00000265354 ZNF682O95780 498 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms