RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 GLOD4Q9HC38 313 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 C6orf203Q9P0P8 240 aaPredicted RBP14.14□□□□□ -0.15
CDH3-201ENST00000264012 AGO1Q9UL18 857 aaKnown RBP14.14□□□□□ -0.15
CDH3-201ENST00000264012 ADGRA3Q8IWK6 1321 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 UNC5CO95185 931 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 CATP04040 527 aaKnown RBP14.14□□□□□ -0.15
CDH3-201ENST00000264012 LILRA4P59901 499 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 DOK6Q6PKX4 331 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 RD3Q7Z3Z2 195 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 HDAC10Q969S8 669 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 KCTD15Q96SI1 283 aaPredicted RBP14.14□□□□□ -0.15
CDH3-201ENST00000264012 MRPL57Q9BQC6 102 aaKnown RBP14.14□□□□□ -0.15
CDH3-201ENST00000264012 C15orf41Q9Y2V0 281 aa14.14□□□□□ -0.15
CDH3-201ENST00000264012 MFSD11O43934 449 aa14.13□□□□□ -0.15
CDH3-201ENST00000264012 PPM1AP35813 382 aa14.13□□□□□ -0.15
CDH3-201ENST00000264012 CLCNKBP51801 687 aa14.13□□□□□ -0.15
CDH3-201ENST00000264012 ATG16L2Q8NAA4 619 aa14.13□□□□□ -0.15
CDH3-201ENST00000264012 TRPC4APQ8TEL6 797 aa14.13□□□□□ -0.15
CDH3-201ENST00000264012 IGFLR1Q9H665 355 aa14.13□□□□□ -0.15
CDH3-201ENST00000264012 SPEF2Q9C093 1822 aa14.13□□□□□ -0.15
CDH3-201ENST00000264012 FGF1P05230 155 aa14.13□□□□□ -0.15
CDH3-201ENST00000264012 ABCB1P08183 1280 aaPredicted RBP14.13□□□□□ -0.15
CDH3-201ENST00000264012 POU1F1P28069 291 aa14.13□□□□□ -0.15
CDH3-201ENST00000264012 TKTP29401 623 aaKnown RBP14.13□□□□□ -0.15
CDH3-201ENST00000264012 PKNOX1P55347 436 aa14.13□□□□□ -0.15
CDH3-201ENST00000264012 CERCAMQ5T4B2 595 aa14.13□□□□□ -0.15
CDH3-201ENST00000264012 ZNF614Q8N883 585 aa14.13□□□□□ -0.15
CDH3-201ENST00000264012 HIPK3Q9H422 1215 aa14.13□□□□□ -0.15
CDH3-201ENST00000264012 XPR1Q9UBH6 696 aa14.13□□□□□ -0.15
CDH3-201ENST00000264012 ANXA5P08758 320 aa14.13□□□□□ -0.15
CDH3-201ENST00000264012 LPOP22079 712 aaPredicted RBP14.13□□□□□ -0.15
CDH3-201ENST00000264012 FECHP22830 423 aa14.13□□□□□ -0.15
CDH3-201ENST00000264012 CTNNB1P35222 781 aa14.13□□□□□ -0.15
CDH3-201ENST00000264012 ACSM2AQ08AH3 577 aa14.13□□□□□ -0.15
CDH3-201ENST00000264012 OASLQ15646 514 aaKnown RBP14.13□□□□□ -0.15
CDH3-201ENST00000264012 PREPLQ4J6C6 727 aaPredicted RBP14.13□□□□□ -0.15
CDH3-201ENST00000264012 INTS6LQ5JSJ4 861 aaKnown RBP14.13□□□□□ -0.15
CDH3-201ENST00000264012 ACSM2BQ68CK6 577 aa14.13□□□□□ -0.15
CDH3-201ENST00000264012 CMC1Q7Z7K0 106 aa14.13□□□□□ -0.15
CDH3-201ENST00000264012 OR6Y1Q8NGX8 325 aa14.13□□□□□ -0.15
CDH3-201ENST00000264012 GDPD5Q8WTR4 605 aa14.13□□□□□ -0.15
CDH3-201ENST00000264012 STK32AQ8WU08 396 aa14.13□□□□□ -0.15
CDH3-201ENST00000264012 CPT1BQ92523 772 aa14.13□□□□□ -0.15
CDH3-201ENST00000264012 DPEP3Q9H4B8 488 aa14.13□□□□□ -0.15
CDH3-201ENST00000264012 TRPC4Q9UBN4 977 aa14.13□□□□□ -0.15
CDH3-201ENST00000264012 KLQ9UEF7 1012 aa14.13□□□□□ -0.15
CDH3-201ENST00000264012 MRPS23Q9Y3D9 190 aaKnown RBP14.13□□□□□ -0.15
CDH3-201ENST00000264012 C15orf38-AP3S2A0A0A6YYH1 394 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 C1orf232A0A0U1RR37 186 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 BIRC5O15392 142 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 MTA2O94776 668 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 PTPN9P43378 593 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 JAG1P78504 1218 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 ALDH6A1Q02252 535 aaKnown RBP14.12□□□□□ -0.15
CDH3-201ENST00000264012 SMARCB1Q12824 385 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 GALNT3Q14435 633 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 DLK2Q6UY11 383 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 ARPINQ7Z6K5 226 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 TRIM69Q86WT6 500 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 OSCP1Q8WVF1 389 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 BTN2A3PQ96KV6 586 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 TBC1D23Q9NUY8 699 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 GNPTGQ9UJJ9 305 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 TMEM88BA6NKF7 163 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 FZD9O00144 591 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 MDM4O15151 490 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 DHX15O43143 795 aaKnown RBP14.12□□□□□ -0.15
CDH3-201ENST00000264012 SH3BGRLO75368 114 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 SELPP16109 830 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 GABRB2P47870 512 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 NEK3P51956 506 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 ADRM1Q16186 407 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 DEPDC1Q5TB30 811 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 GPR141Q7Z602 305 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 PCDH20Q8N6Y1 951 aaKnown RBP14.12□□□□□ -0.15
CDH3-201ENST00000264012 DQX1Q8TE96 717 aaKnown RBP14.12□□□□□ -0.15
CDH3-201ENST00000264012 ZMAT2Q96NC0 199 aaKnown RBP14.12□□□□□ -0.15
CDH3-201ENST00000264012 HNRNPABQ99729 332 aaKnown RBP14.12□□□□□ -0.15
CDH3-201ENST00000264012 SNX8Q9Y5X2 465 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 HDAC3O15379 428 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 CD48P09326 243 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 SLC5A3P53794 718 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 HADHBP55084 474 aaKnown RBP14.12□□□□□ -0.15
CDH3-201ENST00000264012 ELF3P78545 371 aaPredicted RBP14.12□□□□□ -0.15
CDH3-201ENST00000264012 PFKPQ01813 784 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 OTUD3Q5T2D3 398 aaPredicted RBP14.12□□□□□ -0.15
CDH3-201ENST00000264012 ZFP1Q6P2D0 407 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 CRELD2Q6UXH1 353 aaPredicted RBP14.12□□□□□ -0.15
CDH3-201ENST00000264012 MTSS1LQ765P7 747 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 SPATA6LQ8N4H0 392 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 BDH2Q9BUT1 245 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 BCLAF3A2AJT9 711 aaKnown RBP14.12□□□□□ -0.15
CDH3-201ENST00000264012 TPSB2P20231 275 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 LRPAP1P30533 357 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 S100A3P33764 101 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 IRF8Q02556 426 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 TPSAB1Q15661 275 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 MFSD4BQ5TF39 518 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 NECAB2Q7Z6G3 386 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 TTC7BQ86TV6 843 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms