RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 PTPRN2Q92932 1015 aa17.25■□□□□ 0.35
CDKN1A-201ENST00000244741 TBC1D31Q96DN5 1066 aa17.25■□□□□ 0.35
CDKN1A-201ENST00000244741 KLC2Q9H0B6 622 aa17.25■□□□□ 0.35
CDKN1A-201ENST00000244741 VPS11Q9H270 941 aa17.25■□□□□ 0.35
CDKN1A-201ENST00000244741 STK38LQ9Y2H1 464 aa17.25■□□□□ 0.35
CDKN1A-201ENST00000244741 HELZP42694 1942 aaKnown RBP17.24■□□□□ 0.35
CDKN1A-201ENST00000244741 A8MUI8 341 aa17.24■□□□□ 0.35
CDKN1A-201ENST00000244741 CXorf49A8MYA2 514 aaPredicted RBP17.24■□□□□ 0.35
CDKN1A-201ENST00000244741 ALADP13716 330 aa17.24■□□□□ 0.35
CDKN1A-201ENST00000244741 PFKLP17858 780 aa17.24■□□□□ 0.35
CDKN1A-201ENST00000244741 NEK3P51956 506 aa17.24■□□□□ 0.35
CDKN1A-201ENST00000244741 SLC18A2Q05940 514 aa17.24■□□□□ 0.35
CDKN1A-201ENST00000244741 E2F5Q15329 346 aa17.24■□□□□ 0.35
CDKN1A-201ENST00000244741 WLSQ5T9L3 541 aa17.24■□□□□ 0.35
CDKN1A-201ENST00000244741 NCBP2-AS2Q69YL0 99 aa17.24■□□□□ 0.35
CDKN1A-201ENST00000244741 NPWQ8N729 165 aa17.24■□□□□ 0.35
CDKN1A-201ENST00000244741 KXD1Q9BQD3 176 aa17.24■□□□□ 0.35
CDKN1A-201ENST00000244741 MANSC1Q9H8J5 431 aa17.24■□□□□ 0.35
CDKN1A-201ENST00000244741 NPHS2Q9NP85 383 aa17.24■□□□□ 0.35
CDKN1A-201ENST00000244741 ZC3H7BQ9UGR2 993 aaKnown RBP17.24■□□□□ 0.35
CDKN1A-201ENST00000244741 ZNF487B1APH4 448 aa17.23■□□□□ 0.35
CDKN1A-201ENST00000244741 DCTN3O75935 186 aa17.23■□□□□ 0.35
CDKN1A-201ENST00000244741 METTL18O95568 372 aa17.23■□□□□ 0.35
CDKN1A-201ENST00000244741 DHRS4L1P0CG22 281 aa17.23■□□□□ 0.35
CDKN1A-201ENST00000244741 ALDH3A1P30838 453 aa17.23■□□□□ 0.35
CDKN1A-201ENST00000244741 MTHFRP42898 656 aa17.23■□□□□ 0.35
CDKN1A-201ENST00000244741 ETV4P43268 484 aa17.23■□□□□ 0.35
CDKN1A-201ENST00000244741 SLC26A11Q86WA9 606 aa17.23■□□□□ 0.35
CDKN1A-201ENST00000244741 CELF5Q8N6W0 485 aaKnown RBP17.23■□□□□ 0.35
CDKN1A-201ENST00000244741 PPM1NQ8N819 430 aa17.23■□□□□ 0.35
CDKN1A-201ENST00000244741 RPP25Q9BUL9 199 aaKnown RBP17.23■□□□□ 0.35
CDKN1A-201ENST00000244741 FRMD8Q9BZ67 464 aaPredicted RBP17.23■□□□□ 0.35
CDKN1A-201ENST00000244741 PRDM6Q9NQX0 595 aa17.23■□□□□ 0.35
CDKN1A-201ENST00000244741 TXLNGQ9NUQ3 528 aa17.23■□□□□ 0.35
CDKN1A-201ENST00000244741 GDE1Q9NZC3 331 aa17.23■□□□□ 0.35
CDKN1A-201ENST00000244741 HEPACAM2A8MVW5 462 aa17.23■□□□□ 0.35
CDKN1A-201ENST00000244741 DCLK1O15075 740 aa17.23■□□□□ 0.35
CDKN1A-201ENST00000244741 MFSD11O43934 449 aa17.23■□□□□ 0.35
CDKN1A-201ENST00000244741 SLC8A1P32418 973 aa17.23■□□□□ 0.35
CDKN1A-201ENST00000244741 TFF2Q03403 129 aa17.23■□□□□ 0.35
CDKN1A-201ENST00000244741 OVGP1Q12889 678 aa17.23■□□□□ 0.35
CDKN1A-201ENST00000244741 GPR153Q6NV75 609 aa17.23■□□□□ 0.35
CDKN1A-201ENST00000244741 PARM1Q6UWI2 310 aa17.23■□□□□ 0.35
CDKN1A-201ENST00000244741 CDKL3Q8IVW4 592 aaPredicted RBP17.23■□□□□ 0.35
CDKN1A-201ENST00000244741 CTAGE3PQ8IX95 158 aa17.23■□□□□ 0.35
CDKN1A-201ENST00000244741 FGF14Q92915 247 aa17.23■□□□□ 0.35
CDKN1A-201ENST00000244741 APOPT1Q96IL0 206 aa17.23■□□□□ 0.35
CDKN1A-201ENST00000244741 FAM111AQ96PZ2 611 aa17.23■□□□□ 0.35
CDKN1A-201ENST00000244741 PLA2G2FQ9BZM2 168 aa17.23■□□□□ 0.35
CDKN1A-201ENST00000244741 A0A0C4DFX4 3053 aa17.23■□□□□ 0.35
CDKN1A-201ENST00000244741 GCATO75600 419 aa17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 T-ENOLP0DO92 83 aa17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 LAMP2P13473 410 aa17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 FCARP24071 287 aa17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 TARSP26639 723 aaKnown RBP17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 GRM2Q14416 872 aa17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 SLC45A4Q5BKX6 768 aa17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 LRRC6Q86X45 466 aa17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 TDRD5Q8NAT2 981 aaKnown RBP17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 RFWD2Q8NHY2 731 aa17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 HLA-CQ95604 372 aa17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 UTP4Q969X6 686 aaKnown RBP17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 ASIC4Q96FT7 647 aa17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 TRIM56Q9BRZ2 755 aaKnown RBP17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 ZYG11BQ9C0D3 744 aa17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 SMYD2Q9NRG4 433 aa17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 RCOR3Q9P2K3 495 aaPredicted RBP17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 HAO1Q9UJM8 370 aa17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 E2F8A0AVK6 867 aa17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 TRIM49D1C9J1S8 452 aa17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 TBL1XO60907 577 aa17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 USP4Q13107 963 aa17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 TTC39BQ5VTQ0 682 aaPredicted RBP17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 FYB2Q5VWT5 728 aa17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 ZNF534Q76KX8 674 aa17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 NLRP9Q7RTR0 991 aa17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 TMEM25Q86YD3 366 aa17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 MCUQ8NE86 351 aa17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 DDI1Q8WTU0 396 aa17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 SUSD6Q92537 303 aa17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 DCTN4Q9UJW0 460 aa17.22■□□□□ 0.35
CDKN1A-201ENST00000244741 UGT1A9O60656 530 aa17.21■□□□□ 0.35
CDKN1A-201ENST00000244741 PRKCHP24723 683 aa17.21■□□□□ 0.35
CDKN1A-201ENST00000244741 HCAR3P49019 387 aa17.21■□□□□ 0.35
CDKN1A-201ENST00000244741 UNC5AQ6ZN44 842 aa17.21■□□□□ 0.35
CDKN1A-201ENST00000244741 MPP5Q8N3R9 675 aa17.21■□□□□ 0.35
CDKN1A-201ENST00000244741 TTC8Q8TAM2 541 aa17.21■□□□□ 0.35
CDKN1A-201ENST00000244741 AGAP11Q8TF27 550 aa17.21■□□□□ 0.35
CDKN1A-201ENST00000244741 DEPDC1BQ8WUY9 529 aa17.21■□□□□ 0.35
CDKN1A-201ENST00000244741 AZIN2Q96A70 460 aa17.21■□□□□ 0.35
CDKN1A-201ENST00000244741 TMA16Q96EY4 203 aaKnown RBP17.21■□□□□ 0.35
CDKN1A-201ENST00000244741 TMEM237Q96Q45 408 aa17.21■□□□□ 0.35
CDKN1A-201ENST00000244741 UGT1A7Q9HAW7 530 aa17.21■□□□□ 0.35
CDKN1A-201ENST00000244741 UGT1A10Q9HAW8 530 aa17.21■□□□□ 0.35
CDKN1A-201ENST00000244741 UGT1A8Q9HAW9 530 aa17.21■□□□□ 0.35
CDKN1A-201ENST00000244741 ZFP14Q9HCL3 533 aa17.21■□□□□ 0.35
CDKN1A-201ENST00000244741 DTLQ9NZJ0 730 aa17.21■□□□□ 0.35
CDKN1A-201ENST00000244741 STOML2Q9UJZ1 356 aa17.21■□□□□ 0.35
CDKN1A-201ENST00000244741 CLEC4EQ9ULY5 219 aa17.21■□□□□ 0.35
CDKN1A-201ENST00000244741 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms