RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 TMEM248Q9NWD8 314 aa15.27■□□□□ 0.04
UPK3A-201ENST00000216211 NEU3Q9UQ49 428 aa15.27■□□□□ 0.04
UPK3A-201ENST00000216211 SIK3Q9Y2K2 1263 aa15.27■□□□□ 0.04
UPK3A-201ENST00000216211 FADS3Q9Y5Q0 445 aa15.27■□□□□ 0.04
UPK3A-201ENST00000216211 BAHCC1Q9P281 2608 aa15.26■□□□□ 0.03
UPK3A-201ENST00000216211 RAD51BO15315 384 aa15.26■□□□□ 0.03
UPK3A-201ENST00000216211 FFAR2O15552 330 aa15.26■□□□□ 0.03
UPK3A-201ENST00000216211 PAK4O96013 591 aaPredicted RBP15.26■□□□□ 0.03
UPK3A-201ENST00000216211 PLEKP08567 350 aaPredicted RBP15.26■□□□□ 0.03
UPK3A-201ENST00000216211 UNGP13051 313 aaPredicted RBP15.26■□□□□ 0.03
UPK3A-201ENST00000216211 RHOQP17081 205 aa15.26■□□□□ 0.03
UPK3A-201ENST00000216211 STAT1P42224 750 aa15.26■□□□□ 0.03
UPK3A-201ENST00000216211 MAPKAPK2P49137 400 aa15.26■□□□□ 0.03
UPK3A-201ENST00000216211 COPB1P53618 953 aaKnown RBP15.26■□□□□ 0.03
UPK3A-201ENST00000216211 HDAC4P56524 1084 aa15.26■□□□□ 0.03
UPK3A-201ENST00000216211 RPS21P63220 83 aaKnown RBP15.26■□□□□ 0.03
UPK3A-201ENST00000216211 DAB2P98082 770 aa15.26■□□□□ 0.03
UPK3A-201ENST00000216211 ZNF211Q13398 564 aaPredicted RBP15.26■□□□□ 0.03
UPK3A-201ENST00000216211 ILKQ13418 452 aa15.26■□□□□ 0.03
UPK3A-201ENST00000216211 HS1BP3Q53T59 392 aa15.26■□□□□ 0.03
UPK3A-201ENST00000216211 ZNF542PQ5EBM4 170 aa15.26■□□□□ 0.03
UPK3A-201ENST00000216211 KIAA1161Q6NSJ0 714 aa15.26■□□□□ 0.03
UPK3A-201ENST00000216211 TRIM72Q6ZMU5 477 aa15.26■□□□□ 0.03
UPK3A-201ENST00000216211 Q6ZSR6 202 aa15.26■□□□□ 0.03
UPK3A-201ENST00000216211 TMC6Q7Z403 805 aa15.26■□□□□ 0.03
UPK3A-201ENST00000216211 PTAR1Q7Z6K3 402 aaPredicted RBP15.26■□□□□ 0.03
UPK3A-201ENST00000216211 ABI3BPQ7Z7G0 1075 aa15.26■□□□□ 0.03
UPK3A-201ENST00000216211 RYBPQ8N488 228 aaPredicted RBP15.26■□□□□ 0.03
UPK3A-201ENST00000216211 AOPEPQ8N6M6 819 aa15.26■□□□□ 0.03
UPK3A-201ENST00000216211 CENPIQ92674 756 aaPredicted RBP15.26■□□□□ 0.03
UPK3A-201ENST00000216211 TBC1D31Q96DN5 1066 aa15.26■□□□□ 0.03
UPK3A-201ENST00000216211 FEM1CQ96JP0 617 aa15.26■□□□□ 0.03
UPK3A-201ENST00000216211 BMFQ96LC9 184 aa15.26■□□□□ 0.03
UPK3A-201ENST00000216211 DCBLD2Q96PD2 775 aa15.26■□□□□ 0.03
UPK3A-201ENST00000216211 SELENOOQ9BVL4 669 aa15.26■□□□□ 0.03
UPK3A-201ENST00000216211 SLC17A9Q9BYT1 436 aa15.26■□□□□ 0.03
UPK3A-201ENST00000216211 HS3ST3A1Q9Y663 406 aa15.26■□□□□ 0.03
UPK3A-201ENST00000216211 AK5Q9Y6K8 562 aa15.26■□□□□ 0.03
UPK3A-201ENST00000216211 SHROOM3Q8TF72 1996 aa15.25■□□□□ 0.03
UPK3A-201ENST00000216211 ANKRD36A6QL64 1941 aa15.25■□□□□ 0.03
UPK3A-201ENST00000216211 POM121BA6NF01 834 aa15.25■□□□□ 0.03
UPK3A-201ENST00000216211 A6NNZ2 444 aa15.25■□□□□ 0.03
UPK3A-201ENST00000216211 PIAS2O75928 621 aa15.25■□□□□ 0.03
UPK3A-201ENST00000216211 LRIG2O94898 1065 aa15.25■□□□□ 0.03
UPK3A-201ENST00000216211 GIMD1P0DJR0 217 aa15.25■□□□□ 0.03
UPK3A-201ENST00000216211 KRT3P12035 628 aa15.25■□□□□ 0.03
UPK3A-201ENST00000216211 RFC1P35251 1148 aaPredicted RBP15.25■□□□□ 0.03
UPK3A-201ENST00000216211 ETFBP38117 255 aa15.25■□□□□ 0.03
UPK3A-201ENST00000216211 ABL2P42684 1182 aa15.25■□□□□ 0.03
UPK3A-201ENST00000216211 NSFP46459 744 aaKnown RBP15.25■□□□□ 0.03
UPK3A-201ENST00000216211 INSM1Q01101 510 aaPredicted RBP15.25■□□□□ 0.03
UPK3A-201ENST00000216211 SEMG2Q02383 582 aa15.25■□□□□ 0.03
UPK3A-201ENST00000216211 NCAPHQ15003 741 aa15.25■□□□□ 0.03
UPK3A-201ENST00000216211 SYCP1Q15431 976 aa15.25■□□□□ 0.03
UPK3A-201ENST00000216211 CLEC16AQ2KHT3 1053 aa15.25■□□□□ 0.03
UPK3A-201ENST00000216211 OR4C6Q8NH72 309 aa15.25■□□□□ 0.03
UPK3A-201ENST00000216211 ISG20Q96AZ6 181 aaKnown RBP15.25■□□□□ 0.03
UPK3A-201ENST00000216211 CRELD1Q96HD1 420 aa15.25■□□□□ 0.03
UPK3A-201ENST00000216211 PCMTD1Q96MG8 357 aaPredicted RBP15.25■□□□□ 0.03
UPK3A-201ENST00000216211 MAGEH1Q9H213 219 aa15.25■□□□□ 0.03
UPK3A-201ENST00000216211 DNAJC28Q9NX36 388 aa15.25■□□□□ 0.03
UPK3A-201ENST00000216211 ADAM22Q9P0K1 906 aa15.25■□□□□ 0.03
UPK3A-201ENST00000216211 GGT7Q9UJ14 662 aa15.25■□□□□ 0.03
UPK3A-201ENST00000216211 A0A087WV48 116 aa15.24■□□□□ 0.03
UPK3A-201ENST00000216211 C16orf96A6NNT2 1141 aa15.24■□□□□ 0.03
UPK3A-201ENST00000216211 KRIT1O00522 736 aa15.24■□□□□ 0.03
UPK3A-201ENST00000216211 TLX3O43711 291 aaPredicted RBP15.24■□□□□ 0.03
UPK3A-201ENST00000216211 AP1G1O43747 822 aa15.24■□□□□ 0.03
UPK3A-201ENST00000216211 RAMP2O60895 175 aa15.24■□□□□ 0.03
UPK3A-201ENST00000216211 MYF5P13349 255 aa15.24■□□□□ 0.03
UPK3A-201ENST00000216211 GPD1P21695 349 aa15.24■□□□□ 0.03
UPK3A-201ENST00000216211 GSCP56915 257 aaPredicted RBP15.24■□□□□ 0.03
UPK3A-201ENST00000216211 POLD3Q15054 466 aaPredicted RBP15.24■□□□□ 0.03
UPK3A-201ENST00000216211 WDR59Q6PJI9 974 aa15.24■□□□□ 0.03
UPK3A-201ENST00000216211 KYAT3Q6YP21 454 aaKnown RBP15.24■□□□□ 0.03
UPK3A-201ENST00000216211 ZNF354CQ86Y25 554 aa15.24■□□□□ 0.03
UPK3A-201ENST00000216211 DCP2Q8IU60 420 aaKnown RBP15.24■□□□□ 0.03
UPK3A-201ENST00000216211 PLPP6Q8IY26 295 aa15.24■□□□□ 0.03
UPK3A-201ENST00000216211 PYROXD2Q8N2H3 581 aa15.24■□□□□ 0.03
UPK3A-201ENST00000216211 NEK11Q8NG66 645 aa15.24■□□□□ 0.03
UPK3A-201ENST00000216211 OR2AP1Q8NGE2 309 aa15.24■□□□□ 0.03
UPK3A-201ENST00000216211 FAM174AQ8TBP5 190 aa15.24■□□□□ 0.03
UPK3A-201ENST00000216211 NRSN2Q9GZP1 204 aa15.24■□□□□ 0.03
UPK3A-201ENST00000216211 RETREG1Q9H6L5 497 aa15.24■□□□□ 0.03
UPK3A-201ENST00000216211 SEPT11Q9NVA2 429 aaKnown RBP15.24■□□□□ 0.03
UPK3A-201ENST00000216211 HPCAL4Q9UM19 191 aa15.24■□□□□ 0.03
UPK3A-201ENST00000216211 CLCA2Q9UQC9 943 aa15.24■□□□□ 0.03
UPK3A-201ENST00000216211 ITM2BQ9Y287 266 aa15.24■□□□□ 0.03
UPK3A-201ENST00000216211 DAAM1Q9Y4D1 1078 aa15.24■□□□□ 0.03
UPK3A-201ENST00000216211 CXorf51AA0A1B0GTR3 108 aa15.23■□□□□ 0.03
UPK3A-201ENST00000216211 IGLON5A6NGN9 336 aa15.23■□□□□ 0.03
UPK3A-201ENST00000216211 CCP110O43303 1012 aa15.23■□□□□ 0.03
UPK3A-201ENST00000216211 GSRP00390 522 aa15.23■□□□□ 0.03
UPK3A-201ENST00000216211 CALB1P05937 261 aa15.23■□□□□ 0.03
UPK3A-201ENST00000216211 UGT2B4P06133 528 aa15.23■□□□□ 0.03
UPK3A-201ENST00000216211 ALPPL2P10696 532 aa15.23■□□□□ 0.03
UPK3A-201ENST00000216211 GEMIN4P57678 1058 aaKnown RBP15.23■□□□□ 0.03
UPK3A-201ENST00000216211 SNRPD1P62314 119 aaKnown RBP15.23■□□□□ 0.03
UPK3A-201ENST00000216211 TPM4P67936 248 aa15.23■□□□□ 0.03
UPK3A-201ENST00000216211 MYL5Q02045 173 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms