RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 HERVK_113Q902F9 699 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 E2F7Q96AV8 911 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 ZNF669Q96BR6 464 aaPredicted RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 CMTM6Q9NX76 183 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 KCND2Q9NZV8 630 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 CEP72Q9P209 647 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 TUBE1Q9UJT0 475 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 NCK2O43639 380 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 ABCB7O75027 752 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 SERPINB7O75635 380 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 PPM1BO75688 479 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 NDUFA10O95299 355 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 ITGB3P05106 788 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 TCF4P15884 667 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 CCR3P51677 355 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 IQSEC1Q6DN90 963 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 CHST15Q7LFX5 561 aaPredicted RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 TMC3Q7Z5M5 1100 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 ZNF677Q86XU0 584 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 OXR1Q8N573 874 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 LENG9Q96B70 501 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 TMEM74Q96NL1 305 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 STRBPQ96SI9 672 aaKnown RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 SP140LQ9H930 580 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 TIGARQ9NQ88 270 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 MAGEB16A2A368 324 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 E2F3O00716 465 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 ARPC2O15144 300 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 DBIP07108 87 aaKnown RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 GSPT1P15170 499 aaKnown RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 MSX1P28360 303 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 OR1E1P30953 314 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 ACAP1Q15027 740 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 FAM153CQ494X1 144 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 C1orf189Q5VU69 101 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 ISLR2Q6UXK2 745 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 MILR1Q7Z6M3 343 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 ARMC8Q8IUR7 673 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 C22orf15Q8WYQ4 148 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 TPD52L3Q96J77 140 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 ANKRD27Q96NW4 1050 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 FRMD8P1Q9BZ68 369 aaPredicted RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 ASLP04424 464 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 APRTP07741 180 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 DNAJA1P31689 397 aaKnown RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 ARSEP51690 589 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 OTUD3Q5T2D3 398 aaPredicted RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 OVOS1Q6IE37 1185 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 CCNI2Q6ZMN8 369 aaPredicted RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 RBM23Q86U06 439 aaKnown RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 SRFBP1Q8NEF9 429 aaKnown RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 SH3RF3Q8TEJ3 882 aaPredicted RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 ASB2Q96Q27 587 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 DPYSL5Q9BPU6 564 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 C2orf49Q9BVC5 232 aaPredicted RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 NOP53Q9NZM5 478 aaKnown RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 TMEM216Q9P0N5 145 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 B4GALT7Q9UBV7 327 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 LARGE1O95461 756 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 FGFR3P22607 806 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 LLGL1Q15334 1064 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 BOLA3Q53S33 107 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 EXOSC6Q5RKV6 272 aaKnown RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 GKN2Q86XP6 184 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 SMPDL3BQ92485 455 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 GCDHQ92947 438 aaPredicted RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 TMEM120AQ9BXJ8 343 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 SPATA6Q9NWH7 488 aaPredicted RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 EIF3KQ9UBQ5 218 aaKnown RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 FAM58BPP0C7Q3 252 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 FCGR1AP12314 374 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 TCEA1P23193 301 aaKnown RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 CDH5P33151 784 aaPredicted RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 BCAT1P54687 386 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 NFYCQ13952 458 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 MPP2Q14168 576 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 CBX2Q14781 532 aaPredicted RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 CDK10Q15131 360 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 TBC1D16Q8TBP0 767 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 DCUN1D5Q9BTE7 237 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 TRIM39Q9HCM9 518 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 PCDHB10Q9UN67 800 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 MEMO1Q9Y316 297 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 HDCP19113 662 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 PPP3R1P63098 170 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 PLGLAQ15195 96 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 CCSAPQ6IQ19 270 aaPredicted RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 STOX1Q6ZVD7 989 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 ZNF605Q86T29 641 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 SERPINB11Q96P15 392 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 YIPF3Q9GZM5 350 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 ARHGEF4Q9NR80 690 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 OAS3Q9Y6K5 1087 aaKnown RBP3.48□□□□□ -1.85
NEB-201ENST00000172853 METP08581 1390 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 SYNMO15061 1565 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 RAMP2O60895 175 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 ATP6V1G1O75348 118 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 MED26O95402 600 aa3.48□□□□□ -1.85
NEB-201ENST00000172853 ALPPP05187 535 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms