RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 POLD3Q15054 466 aaPredicted RBP12.22□□□□□ -0.45
CHPF2-201ENST00000035307 AP1ARQ63HQ0 302 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 GSTCDQ8NEC7 633 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 OR52K2Q8NGK3 314 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 PPP1R10Q96QC0 940 aaKnown RBP12.22□□□□□ -0.45
CHPF2-201ENST00000035307 SEMA6AQ9H2E6 1030 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 FAM96AQ9H5X1 160 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 NUMA1Q14980 2115 aa12.22□□□□□ -0.45
CHPF2-201ENST00000035307 SYNDIG1LA6NDD5 238 aa12.21□□□□□ -0.45
CHPF2-201ENST00000035307 HAS3O00219 553 aa12.21□□□□□ -0.45
CHPF2-201ENST00000035307 ABHD2P08910 425 aa12.21□□□□□ -0.45
CHPF2-201ENST00000035307 AKT1P31749 480 aa12.21□□□□□ -0.45
CHPF2-201ENST00000035307 PTDSS1P48651 473 aaKnown RBP12.21□□□□□ -0.45
CHPF2-201ENST00000035307 GEMP55040 296 aa12.21□□□□□ -0.45
CHPF2-201ENST00000035307 GPX6P59796 221 aa12.21□□□□□ -0.45
CHPF2-201ENST00000035307 CRYMQ14894 314 aa12.21□□□□□ -0.45
CHPF2-201ENST00000035307 ACAP1Q15027 740 aa12.21□□□□□ -0.45
CHPF2-201ENST00000035307 PCBP1Q15365 356 aaKnown RBP eCLIP12.21□□□□□ -0.451e-7■■■■■ 51.9
CHPF2-201ENST00000035307 PACS1Q6VY07 963 aa12.21□□□□□ -0.45
CHPF2-201ENST00000035307 LPCAT1Q8NF37 534 aa12.21□□□□□ -0.45
CHPF2-201ENST00000035307 OR7D4Q8NG98 312 aa12.21□□□□□ -0.45
CHPF2-201ENST00000035307 STK32AQ8WU08 396 aa12.21□□□□□ -0.45
CHPF2-201ENST00000035307 NUP205Q92621 2012 aa12.21□□□□□ -0.45
CHPF2-201ENST00000035307 ACBD6Q9BR61 282 aa12.21□□□□□ -0.45
CHPF2-201ENST00000035307 ZNF670Q9BS34 389 aa12.21□□□□□ -0.45
CHPF2-201ENST00000035307 CAAP1Q9H8G2 361 aa12.21□□□□□ -0.45
CHPF2-201ENST00000035307 DONSONQ9NYP3 566 aa12.21□□□□□ -0.45
CHPF2-201ENST00000035307 LSM7Q9UK45 103 aaKnown RBP12.21□□□□□ -0.45
CHPF2-201ENST00000035307 AAR2Q9Y312 384 aaKnown RBP12.21□□□□□ -0.45
CHPF2-201ENST00000035307 CLTBP09497 229 aa12.21□□□□□ -0.45
CHPF2-201ENST00000035307 POU5F1Q01860 360 aaKnown RBP12.21□□□□□ -0.45
CHPF2-201ENST00000035307 TMED1Q13445 227 aa12.21□□□□□ -0.45
CHPF2-201ENST00000035307 LRRC73Q5JTD7 316 aa12.21□□□□□ -0.45
CHPF2-201ENST00000035307 TMC5Q6UXY8 1006 aa12.21□□□□□ -0.45
CHPF2-201ENST00000035307 PSTKQ8IV42 348 aaKnown RBP12.21□□□□□ -0.45
CHPF2-201ENST00000035307 SLC35B2Q8TB61 432 aa12.21□□□□□ -0.45
CHPF2-201ENST00000035307 SLC44A1Q8WWI5 657 aa12.21□□□□□ -0.45
CHPF2-201ENST00000035307 ARNTL2Q8WYA1 636 aa12.21□□□□□ -0.45
CHPF2-201ENST00000035307 ZNF317Q96PQ6 595 aaPredicted RBP12.21□□□□□ -0.45
CHPF2-201ENST00000035307 CINPQ9BW66 212 aaPredicted RBP12.21□□□□□ -0.45
CHPF2-201ENST00000035307 ING2Q9H160 280 aa12.21□□□□□ -0.45
CHPF2-201ENST00000035307 ALG9Q9H6U8 611 aa12.21□□□□□ -0.45
CHPF2-201ENST00000035307 RNPEPL1Q9HAU8 725 aa12.21□□□□□ -0.45
CHPF2-201ENST00000035307 DTLQ9NZJ0 730 aa12.21□□□□□ -0.45
CHPF2-201ENST00000035307 PKP3Q9Y446 797 aa12.21□□□□□ -0.45
CHPF2-201ENST00000035307 COL11A1P12107 1806 aaPredicted RBP12.21□□□□□ -0.45
CHPF2-201ENST00000035307 TRIM16O95361 564 aa12.21□□□□□ -0.46
CHPF2-201ENST00000035307 CCNB1P14635 433 aa12.21□□□□□ -0.46
CHPF2-201ENST00000035307 NELFEP18615 380 aaKnown RBP12.21□□□□□ -0.46
CHPF2-201ENST00000035307 HMOX2P30519 316 aa12.21□□□□□ -0.46
CHPF2-201ENST00000035307 CHRNA4P43681 627 aa12.21□□□□□ -0.46
CHPF2-201ENST00000035307 NR2C2P49116 596 aa12.21□□□□□ -0.46
CHPF2-201ENST00000035307 ANKS3Q6ZW76 656 aa12.21□□□□□ -0.46
CHPF2-201ENST00000035307 HS6ST3Q8IZP7 471 aa12.21□□□□□ -0.46
CHPF2-201ENST00000035307 CRYBG2Q8N1P7 616 aa12.21□□□□□ -0.46
CHPF2-201ENST00000035307 CYGBQ8WWM9 190 aa12.21□□□□□ -0.46
CHPF2-201ENST00000035307 RPL10LQ96L21 214 aaKnown RBP12.21□□□□□ -0.46
CHPF2-201ENST00000035307 EBF4Q9BQW3 602 aa12.21□□□□□ -0.46
CHPF2-201ENST00000035307 BPIFA1Q9NP55 256 aa12.21□□□□□ -0.46
CHPF2-201ENST00000035307 HPS4Q9NQG7 708 aa12.21□□□□□ -0.46
CHPF2-201ENST00000035307 SNX15Q9NRS6 342 aa12.21□□□□□ -0.46
CHPF2-201ENST00000035307 THEGQ9P2T0 379 aa12.21□□□□□ -0.46
CHPF2-201ENST00000035307 DOCK1Q14185 1865 aa12.21□□□□□ -0.46
CHPF2-201ENST00000035307 PMM2O15305 246 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 ADAM12O43184 909 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 FGBP02675 491 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 ALADP13716 330 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 CD151P48509 253 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 ZNF132P52740 706 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 PLOD1Q02809 727 aaPredicted RBP12.2□□□□□ -0.46
CHPF2-201ENST00000035307 PARP6Q2NL67 630 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 KIAA0319Q5VV43 1072 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 LINC00523Q86TU6 105 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 SERPINB11Q96P15 392 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 MAF1Q9H063 256 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 NMUR1Q9HB89 426 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 SOX13Q9UN79 622 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 FAM95CA0A1B0GW59 222 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 ASMTLO95671 621 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 WARSP23381 471 aaKnown RBP12.2□□□□□ -0.46
CHPF2-201ENST00000035307 NEPROQ6NW34 567 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 RTN4RL1Q86UN2 441 aaPredicted RBP12.2□□□□□ -0.46
CHPF2-201ENST00000035307 TMPRSS6Q8IU80 811 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 CENPKQ9BS16 269 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 SLC4A5Q9BY07 1137 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 MTIF3Q9H2K0 278 aaKnown RBP12.2□□□□□ -0.46
CHPF2-201ENST00000035307 VCX3AQ9NNX9 186 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 ZDHHC4Q9NPG8 344 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 PARNO95453 639 aaKnown RBP12.2□□□□□ -0.46
CHPF2-201ENST00000035307 C2P06681 752 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 GALTP07902 379 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 CCDC166P0CW27 439 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 USP46P62068 366 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 CYLC2Q14093 348 aaPredicted RBP12.2□□□□□ -0.46
CHPF2-201ENST00000035307 HECTD3Q5T447 861 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 TMEM110Q86TL2 294 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 ZDHHC17Q8IUH5 632 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 ZNF567Q8N184 647 aa12.2□□□□□ -0.46
CHPF2-201ENST00000035307 ACE2Q9BYF1 805 aaPredicted RBP12.2□□□□□ -0.46
CHPF2-201ENST00000035307 CASS4Q9NQ75 786 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms