RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 USP36Q9P275 1121 aaKnown RBP12.22□□□□□ -0.45
SYPL1-201ENST00000011473 SEPT3Q9UH03 358 aa12.22□□□□□ -0.45
SYPL1-201ENST00000011473 MBD1Q9UIS9 605 aaPredicted RBP12.22□□□□□ -0.45
SYPL1-201ENST00000011473 R3HDM2Q9Y2K5 976 aaKnown RBP12.22□□□□□ -0.45
SYPL1-201ENST00000011473 CACNA1HO95180 2353 aa12.21□□□□□ -0.45
SYPL1-201ENST00000011473 IGHV1OR15-9A0A0B4J2B8 117 aa12.21□□□□□ -0.45
SYPL1-201ENST00000011473 CXorf51AA0A1B0GTR3 108 aa12.21□□□□□ -0.45
SYPL1-201ENST00000011473 PPP1R12AO14974 1030 aaPredicted RBP12.21□□□□□ -0.45
SYPL1-201ENST00000011473 MATN3O15232 486 aa12.21□□□□□ -0.45
SYPL1-201ENST00000011473 TJP3O95049 919 aa12.21□□□□□ -0.45
SYPL1-201ENST00000011473 IGSF6O95976 241 aa12.21□□□□□ -0.45
SYPL1-201ENST00000011473 GSRP00390 522 aa12.21□□□□□ -0.45
SYPL1-201ENST00000011473 JCHAINP01591 159 aa12.21□□□□□ -0.45
SYPL1-201ENST00000011473 CCNB1P14635 433 aa12.21□□□□□ -0.45
SYPL1-201ENST00000011473 CETN2P41208 172 aa12.21□□□□□ -0.45
SYPL1-201ENST00000011473 NR2C2P49116 596 aa12.21□□□□□ -0.45
SYPL1-201ENST00000011473 KLF1Q13351 362 aaPredicted RBP12.21□□□□□ -0.45
SYPL1-201ENST00000011473 RFTN1Q14699 578 aaPredicted RBP12.21□□□□□ -0.45
SYPL1-201ENST00000011473 LRRC73Q5JTD7 316 aa12.21□□□□□ -0.45
SYPL1-201ENST00000011473 SEL1L2Q5TEA6 688 aa12.21□□□□□ -0.45
SYPL1-201ENST00000011473 TIGD7Q6NT04 549 aaPredicted RBP12.21□□□□□ -0.45
SYPL1-201ENST00000011473 KBTBD6Q86V97 674 aa12.21□□□□□ -0.45
SYPL1-201ENST00000011473 NSMCE1Q8WV22 266 aa12.21□□□□□ -0.45
SYPL1-201ENST00000011473 GAB3Q8WWW8 586 aa12.21□□□□□ -0.45
SYPL1-201ENST00000011473 TOE1Q96GM8 510 aaKnown RBP12.21□□□□□ -0.45
SYPL1-201ENST00000011473 ZNF599Q96NL3 588 aa12.21□□□□□ -0.45
SYPL1-201ENST00000011473 TSGA13Q96PP4 275 aa12.21□□□□□ -0.45
SYPL1-201ENST00000011473 WDR24Q96S15 920 aa12.21□□□□□ -0.45
SYPL1-201ENST00000011473 NEUROG2Q9H2A3 272 aa12.21□□□□□ -0.45
SYPL1-201ENST00000011473 PABPC3Q9H361 631 aaKnown RBP12.21□□□□□ -0.45
SYPL1-201ENST00000011473 FBRSQ9HAH7 460 aa12.21□□□□□ -0.45
SYPL1-201ENST00000011473 ITM2CQ9NQX7 267 aa12.21□□□□□ -0.45
SYPL1-201ENST00000011473 RBM22Q9NW64 420 aaKnown RBP eCLIP12.21□□□□□ -0.45
SYPL1-201ENST00000011473 JRKLQ9Y4A0 524 aa12.21□□□□□ -0.45
SYPL1-201ENST00000011473 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 C1QTNF3-AMACRE9PGA6 284 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 LILRB5O75023 590 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 ZNF217O75362 1048 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 HLA-DQB2P05538 268 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 RENBPP51606 427 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 GNG11P61952 73 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 ITKQ08881 620 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 CNTN1Q12860 1018 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 HNRNPDQ14103 355 aaKnown RBP12.2□□□□□ -0.46
SYPL1-201ENST00000011473 SIM2Q14190 667 aaPredicted RBP12.2□□□□□ -0.46
SYPL1-201ENST00000011473 KCTD19Q17RG1 926 aaPredicted RBP12.2□□□□□ -0.46
SYPL1-201ENST00000011473 TTC31Q49AM3 519 aaPredicted RBP12.2□□□□□ -0.46
SYPL1-201ENST00000011473 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.2□□□□□ -0.46
SYPL1-201ENST00000011473 CEP68Q76N32 757 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 ARMCX6Q7L4S7 300 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 DSG4Q86SJ6 1040 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 METTL3Q86U44 580 aaKnown RBP12.2□□□□□ -0.46
SYPL1-201ENST00000011473 LRRC49Q8IUZ0 686 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 TMEFF1Q8IYR6 380 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 TFB1MQ8WVM0 346 aaKnown RBP12.2□□□□□ -0.46
SYPL1-201ENST00000011473 ATG4AQ8WYN0 398 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 MAML1Q92585 1016 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 ARRDC3Q96B67 414 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 AGAP3Q96P47 875 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 OMDQ99983 421 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 CARD9Q9H257 536 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 EFR3BQ9Y2G0 817 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 PRR23AA6NEV1 266 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 F5H423 210 aaPredicted RBP12.2□□□□□ -0.46
SYPL1-201ENST00000011473 FANCGO15287 622 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 ALOX15BO15296 676 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 POP4O95707 220 aaKnown RBP12.2□□□□□ -0.46
SYPL1-201ENST00000011473 ADH1BP00325 375 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 PRNPP04156 253 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 C5AR1P21730 350 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 NHLH1Q02575 133 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 RPL6Q02878 288 aaKnown RBP12.2□□□□□ -0.46
SYPL1-201ENST00000011473 PRKD1Q15139 912 aaPredicted RBP12.2□□□□□ -0.46
SYPL1-201ENST00000011473 NOMO1Q15155 1222 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 ZC3H14Q6PJT7 736 aaKnown RBP12.2□□□□□ -0.46
SYPL1-201ENST00000011473 CAMK1DQ8IU85 385 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 CNTD1Q8N815 330 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 SPACA7Q96KW9 195 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 KLHL32Q96NJ5 620 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 MGME1Q9BQP7 344 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 GPR174Q9BXC1 333 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 KCNH6Q9H252 994 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 NOD2Q9HC29 1040 aa12.2□□□□□ -0.46
SYPL1-201ENST00000011473 H7C0C1 242 aa12.19□□□□□ -0.46
SYPL1-201ENST00000011473 MAP3K13O43283 966 aa12.19□□□□□ -0.46
SYPL1-201ENST00000011473 CEP104O60308 925 aa12.19□□□□□ -0.46
SYPL1-201ENST00000011473 NEBLO76041 1014 aa12.19□□□□□ -0.46
SYPL1-201ENST00000011473 RBL1P28749 1068 aa12.19□□□□□ -0.46
SYPL1-201ENST00000011473 CD6P30203 668 aa12.19□□□□□ -0.46
SYPL1-201ENST00000011473 ATP5OP48047 213 aa12.19□□□□□ -0.46
SYPL1-201ENST00000011473 EIF3EP60228 445 aaKnown RBP12.19□□□□□ -0.46
SYPL1-201ENST00000011473 ZBTB16Q05516 673 aa12.19□□□□□ -0.46
SYPL1-201ENST00000011473 IHHQ14623 411 aa12.19□□□□□ -0.46
SYPL1-201ENST00000011473 FAM46CQ5VWP2 391 aa12.19□□□□□ -0.46
SYPL1-201ENST00000011473 SLC13A5Q86YT5 568 aaPredicted RBP12.19□□□□□ -0.46
SYPL1-201ENST00000011473 TEX26Q8N6G2 289 aa12.19□□□□□ -0.46
SYPL1-201ENST00000011473 TMIEQ8NEW7 156 aa12.19□□□□□ -0.46
SYPL1-201ENST00000011473 MS4A14Q96JA4 679 aa12.19□□□□□ -0.46
SYPL1-201ENST00000011473 WSB2Q9NYS7 404 aaPredicted RBP12.19□□□□□ -0.46
SYPL1-201ENST00000011473 SMARCAL1Q9NZC9 954 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms