RNA–Protein interactions for RNA: ENSMUST00000042012.6

Sf3b3-201, Transcript of Splicing factor 3B subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b3, Length 4,525 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3-201ENSMUST00000042012 Tarbp2P97473 365 aa9.27□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Shcbp1lQ3TTP0 639 aa9.27□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 GkQ64516 559 aa9.27□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Xpnpep1Q6P1B1 623 aa9.27□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Kctd13Q8BGV7 329 aa9.27□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Bpifb6Q8BU51 449 aa9.27□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Fcho1Q8K285 873 aa9.27□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Eif3lQ8QZY1 564 aaKnown RBP9.27□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Igsf8Q8R366 611 aa9.27□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Pcdhac2Q91Y09 1006 aa9.27□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Pcdha1Q91Y21 948 aa9.27□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Tas1r1Q99PG6 842 aa9.27□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Vsig1Q9D2J4 407 aa9.27□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Spint1Q9R097 507 aa9.27□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 NinQ61043 2035 aa9.27□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Gm45208A0A140LJ36 292 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Kif28pD3YXS5 1028 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Gm28043E0CXC2 719 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Adam19O35674 920 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Lmo2P25801 158 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Krt86P97861 486 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Tnks2Q3UES3 1166 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Tcf4Q60722 670 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Chi3l1Q61362 389 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Olfr1152Q7TR34 310 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Avl9Q80U56 649 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Atl1Q8BH66 558 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Trub1Q8C0D0 338 aaKnown RBP9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Camkk1Q8VBY2 505 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Olfr474Q8VFC9 310 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Ppa2Q91VM9 330 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Prb1Q91X93 504 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Lrrc40Q9CRC8 602 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Det1Q9D0A0 550 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Clca1Q9D7Z6 913 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 PyglQ9ET01 850 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Cacng4Q9JJV4 327 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Atp6ap1lD3Z5W0 336 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Vmn1r88E9Q235 316 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Pcdh9F8VPK8 1237 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Spin2fJ3QPU0 254 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Capn2O08529 700 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Casp8O89110 480 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 FesP16879 822 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 PcnaP17918 261 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 AmhP27106 555 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Ranbp1P34022 203 aaKnown RBP9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 BtkP35991 659 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 KapP61110 121 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Vps45P97390 570 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 S100gP97816 79 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 PrkcqQ02111 707 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Mapk10Q61831 464 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Znf280cQ6P3Y5 742 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Zfyve1Q810J8 777 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Cep57Q8CEE0 500 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Mill1Q8HWE7 395 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Pdk3Q922H2 415 aaKnown RBP9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Camk2gQ923T9 529 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Kdelr1Q99JH8 212 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Rpl4Q9D8E6 419 aaKnown RBP9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 AllcQ9JHX6 414 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 AuhQ9JLZ3 314 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Mrgpra2aA0A0R4J1Z0 331 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Gm10718D3Z1I7 227 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 C87414E9PWI7 475 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Ca3P16015 260 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Il1rnP25085 178 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Nfkb1P25799 971 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Nos2P29477 1144 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Traf2P39429 501 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Zfp956Q3UZY6 572 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Pacsin1Q61644 441 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Trpa1Q8BLA8 1125 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Slco2b1Q8BXB6 683 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Gpr20Q8BYC4 358 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Nt5dc1Q8C5P5 467 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Lrrc66Q8K0B3 872 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Pcdhga9Q91XX9 932 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Rrp1bQ91YK2 724 aaKnown RBP9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Homer3Q99JP6 356 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Bbs2Q9CWF6 721 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Rasgef1cQ9D300 466 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Scamp5Q9JKD3 235 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Tubgcp6G5E8P0 1769 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Gm14781A2A9Q9 366 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Vmn2r39L7N2E5 861 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 FaahO08914 579 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 E2f6O54917 272 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Pou3f3P31361 497 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Rpl36P47964 105 aaKnown RBP9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Gad2P48320 585 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Mageb5Q14AN0 366 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Acss3Q14DH7 682 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Fscn2Q32M02 492 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 WhammQ571B6 793 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Traf3Q60803 567 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Mtnr1aQ61184 353 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 EsrrbQ61539 433 aa9.26□□□□□ -0.93
Sf3b3-201ENSMUST00000042012 Pabpc2Q62029 628 aa9.26□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 11 ms