RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Camk1dQ8BW96 385 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Slc35f5Q8R314 524 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Wnt9aQ8R5M2 365 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Ndufs2Q91WD5 463 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Akr1c12Q9JLI0 323 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Slfn3A0A1L1STQ7 640 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Fam171a2A2A699 822 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Gm14401A2ARV7 303 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Nipsnap3aB1AWZ3 247 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Zbed5B2RPU8 756 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Slc16a8O35308 492 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 LdhcP00342 332 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Ap2a1P17426 977 aaKnown RBP10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Cd247P24161 164 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Cpne7Q0VE82 557 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Dnajb14Q149L6 379 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Dnajc1Q61712 552 aaKnown RBP10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Gja6Q6S5G4 283 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Olfr213Q7TS32 327 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Sh3rf3Q8C120 878 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Hdac7Q8C2B3 938 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 TdrpQ8C5P7 182 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Bhlhe22Q8C6A8 355 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Lgals12Q91VD1 314 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 KmoQ91WN4 479 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Slc25a11Q9CR62 314 aaKnown RBP10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Fam173bQ9D1Z3 247 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Batf3Q9D275 118 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Kctd4Q9D7X1 259 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Dpysl5Q9EQF6 564 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Sae1Q9R1T2 350 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Fbxl18E9PYR1 771 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 TecP24604 630 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Slc2a3P32037 493 aaKnown RBP10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 GlrbP48168 496 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Zbtb14Q08376 449 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Lpcat1Q3TFD2 534 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 HrQ61645 1182 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Nemp1Q6ZQE4 437 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Cpsf7Q8BTV2 471 aaKnown RBP10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Camkk2Q8C078 588 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 H2afy2Q8CCK0 372 aaKnown RBP10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Mkl1Q8K4J6 964 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Asz1Q8VD46 475 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Socs4Q91ZA6 436 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Sytl2Q99N50 950 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Ddx59Q9DBN9 619 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Sh2d3cQ9QZS8 854 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Racgap1Q9WVM1 628 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Znf711A2ANX9 761 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 ClockO08785 855 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Tpst1O70281 370 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Vti1bO88384 232 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Cxcr3O88410 367 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 CkmP07310 381 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Tmem247Q497K7 211 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Znf354cQ571J5 560 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Sfmbt2Q5DTW2 938 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Aldh1a2Q62148 518 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Scaf4Q6PFF0 1209 aaKnown RBP10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Mis18bp1Q80WQ8 998 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Fam83eQ80XS7 481 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Zfp57Q8C6P8 421 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Snrnp27Q8K194 155 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Fam151aQ8QZW3 608 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Olfr866Q8VFI7 312 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Stard13Q923Q2 1113 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 AuhQ9JLZ3 314 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Gm8369E9PZI3 166 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Hsd17b14E9Q3D4 273 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 PdgfrbP05622 1098 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Il1rl1P14719 567 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Wnt3aP27467 352 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Ephb3P54754 993 aaKnown RBP10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Adamts10P58459 1104 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Shox2P70390 331 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Kansl1lQ5DTI6 991 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Arl5cQ6P068 179 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Krr1Q8BGA5 380 aaKnown RBP10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Bmp3Q8BHE5 468 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Exoc3l1Q8BI71 739 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Spon2Q8BMS2 330 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 RtknQ8C6B2 564 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 HnrnplQ8R081 586 aaKnown RBP10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Pcdhb13Q91Y06 796 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Pop5Q9DB28 169 aa10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Stap1Q9JM90 297 aaKnown RBP10.4□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Gm44511A0A0N4SW10 223 aa10.4□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 4930558K02RikE0CXC6 182 aa10.4□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Kng1O08677 661 aa10.4□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 AdslP54822 484 aa10.4□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 PamP97467 979 aa10.4□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Mrgprb1Q3UG61 350 aa10.4□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Slc22a16Q497L8 649 aa10.4□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Tmprss11eQ5S248 423 aa10.4□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Hesx1Q61658 185 aa10.4□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Map2k2Q63932 401 aa10.4□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Cops7bQ8BV13 264 aa10.4□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Stx16Q8BVI5 326 aa10.4□□□□□ -0.75
Ccdc40-201ENSMUST00000035935 Nle1Q8VEJ4 485 aa10.4□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms