RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 ZNF135P52742 658 aaPredicted RBP15.31■□□□□ 0.04
PHGDH-231ENST00000641939 RACK1P63244 317 aaKnown RBP15.31■□□□□ 0.04
PHGDH-231ENST00000641939 BNC1Q01954 994 aa15.31■□□□□ 0.04
PHGDH-231ENST00000641939 MAPK8IP2Q13387 824 aaPredicted RBP15.31■□□□□ 0.04
PHGDH-231ENST00000641939 SERINC3Q13530 473 aa15.31■□□□□ 0.04
PHGDH-231ENST00000641939 SLC18A3Q16572 532 aa15.31■□□□□ 0.04
PHGDH-231ENST00000641939 PPP6R3Q5H9R7 873 aaPredicted RBP15.31■□□□□ 0.04
PHGDH-231ENST00000641939 IL27RAQ6UWB1 636 aa15.31■□□□□ 0.04
PHGDH-231ENST00000641939 LEKR1Q6ZMV7 388 aa15.31■□□□□ 0.04
PHGDH-231ENST00000641939 RFX8Q6ZV50 586 aa15.31■□□□□ 0.04
PHGDH-231ENST00000641939 NIPA2Q8N8Q9 360 aa15.31■□□□□ 0.04
PHGDH-231ENST00000641939 ARRDC3Q96B67 414 aa15.31■□□□□ 0.04
PHGDH-231ENST00000641939 ARHGEF26Q96DR7 871 aa15.31■□□□□ 0.04
PHGDH-231ENST00000641939 HMCESQ96FZ2 354 aa15.31■□□□□ 0.04
PHGDH-231ENST00000641939 HEPHQ9BQS7 1158 aa15.31■□□□□ 0.04
PHGDH-231ENST00000641939 TM6SF2Q9BZW4 377 aa15.31■□□□□ 0.04
PHGDH-231ENST00000641939 KLC2Q9H0B6 622 aa15.31■□□□□ 0.04
PHGDH-231ENST00000641939 EBF2Q9HAK2 575 aa15.31■□□□□ 0.04
PHGDH-231ENST00000641939 HECAQ9UBI9 543 aaPredicted RBP15.31■□□□□ 0.04
PHGDH-231ENST00000641939 IP6K2Q9UHH9 426 aa15.31■□□□□ 0.04
PHGDH-231ENST00000641939 ANAPC7Q9UJX3 599 aa15.31■□□□□ 0.04
PHGDH-231ENST00000641939 WASF2Q9Y6W5 498 aa15.31■□□□□ 0.04
PHGDH-231ENST00000641939 TPRP12270 2363 aaKnown RBP15.31■□□□□ 0.04
PHGDH-231ENST00000641939 A0A1B0GVT2 93 aa15.3■□□□□ 0.04
PHGDH-231ENST00000641939 SSU72P8A0A1W2PR75 194 aa15.3■□□□□ 0.04
PHGDH-231ENST00000641939 UPK3BL1B0FP48 263 aa15.3■□□□□ 0.04
PHGDH-231ENST00000641939 UPK3BL2E5RIL1 263 aa15.3■□□□□ 0.04
PHGDH-231ENST00000641939 LATO43561 262 aa15.3■□□□□ 0.04
PHGDH-231ENST00000641939 MFAP3LO75121 409 aa15.3■□□□□ 0.04
PHGDH-231ENST00000641939 GJB3O75712 270 aa15.3■□□□□ 0.04
PHGDH-231ENST00000641939 GSRP00390 522 aa15.3■□□□□ 0.04
PHGDH-231ENST00000641939 CSRP1P21291 193 aaKnown RBP15.3■□□□□ 0.04
PHGDH-231ENST00000641939 IL1R2P27930 398 aa15.3■□□□□ 0.04
PHGDH-231ENST00000641939 HCAR3P49019 387 aa15.3■□□□□ 0.04
PHGDH-231ENST00000641939 NOVA1P51513 510 aaKnown RBP15.3■□□□□ 0.04
PHGDH-231ENST00000641939 NDST2P52849 883 aa15.3■□□□□ 0.04
PHGDH-231ENST00000641939 SNRPD1P62314 119 aaKnown RBP15.3■□□□□ 0.04
PHGDH-231ENST00000641939 PPP2CBP62714 309 aa15.3■□□□□ 0.04
PHGDH-231ENST00000641939 PPP2CAP67775 309 aa15.3■□□□□ 0.04
PHGDH-231ENST00000641939 ASTE1Q2TB18 679 aaPredicted RBP15.3■□□□□ 0.04
PHGDH-231ENST00000641939 BOLA3Q53S33 107 aa15.3■□□□□ 0.04
PHGDH-231ENST00000641939 PIP5KL1Q5T9C9 394 aa15.3■□□□□ 0.04
PHGDH-231ENST00000641939 SARM1Q6SZW1 724 aa15.3■□□□□ 0.04
PHGDH-231ENST00000641939 CASKIN2Q8WXE0 1202 aa15.3■□□□□ 0.04
PHGDH-231ENST00000641939 PPP1R16AQ96I34 528 aa15.3■□□□□ 0.04
PHGDH-231ENST00000641939 BTBD6Q96KE9 485 aa15.3■□□□□ 0.04
PHGDH-231ENST00000641939 HDAC8Q9BY41 377 aa15.3■□□□□ 0.04
PHGDH-231ENST00000641939 DEF6Q9H4E7 631 aa15.3■□□□□ 0.04
PHGDH-231ENST00000641939 ZDHHC6Q9H6R6 413 aa15.3■□□□□ 0.04
PHGDH-231ENST00000641939 LRRC19Q9H756 370 aa15.3■□□□□ 0.04
PHGDH-231ENST00000641939 ZWILCHQ9H900 591 aa15.3■□□□□ 0.04
PHGDH-231ENST00000641939 PREBQ9HCU5 417 aa15.3■□□□□ 0.04
PHGDH-231ENST00000641939 ABHD10Q9NUJ1 306 aa15.3■□□□□ 0.04
PHGDH-231ENST00000641939 SHROOM3Q8TF72 1996 aa15.29■□□□□ 0.04
PHGDH-231ENST00000641939 ANKRD36A6QL64 1941 aa15.29■□□□□ 0.04
PHGDH-231ENST00000641939 MYO1FO00160 1098 aa15.29■□□□□ 0.04
PHGDH-231ENST00000641939 RNF103O00237 685 aa15.29■□□□□ 0.04
PHGDH-231ENST00000641939 TMCC1O94876 653 aa15.29■□□□□ 0.04
PHGDH-231ENST00000641939 CER1O95813 267 aa15.29■□□□□ 0.04
PHGDH-231ENST00000641939 TCF4P15884 667 aa15.29■□□□□ 0.04
PHGDH-231ENST00000641939 ERCC2P18074 760 aa15.29■□□□□ 0.04
PHGDH-231ENST00000641939 ITGB7P26010 798 aa15.29■□□□□ 0.04
PHGDH-231ENST00000641939 ADKP55263 362 aaKnown RBP15.29■□□□□ 0.04
PHGDH-231ENST00000641939 TAS2R38P59533 333 aa15.29■□□□□ 0.04
PHGDH-231ENST00000641939 SLC14A1Q13336 389 aa15.29■□□□□ 0.04
PHGDH-231ENST00000641939 SMTNL2Q2TAL5 461 aa15.29■□□□□ 0.04
PHGDH-231ENST00000641939 HLA-BQ31612 363 aa15.29■□□□□ 0.04
PHGDH-231ENST00000641939 INO80DQ53TQ3 878 aaPredicted RBP15.29■□□□□ 0.04
PHGDH-231ENST00000641939 KCNT1Q5JUK3 1230 aa15.29■□□□□ 0.04
PHGDH-231ENST00000641939 PSAPL1Q6NUJ1 521 aa15.29■□□□□ 0.04
PHGDH-231ENST00000641939 ERN2Q76MJ5 926 aaKnown RBP15.29■□□□□ 0.04
PHGDH-231ENST00000641939 ADAT2Q7Z6V5 191 aaKnown RBP15.29■□□□□ 0.04
PHGDH-231ENST00000641939 PIP4P1Q86T03 277 aa15.29■□□□□ 0.04
PHGDH-231ENST00000641939 PRPF39Q86UA1 669 aaKnown RBP15.29■□□□□ 0.04
PHGDH-231ENST00000641939 TRIM69Q86WT6 500 aa15.29■□□□□ 0.04
PHGDH-231ENST00000641939 RYBPQ8N488 228 aaPredicted RBP15.29■□□□□ 0.04
PHGDH-231ENST00000641939 OR2AP1Q8NGE2 309 aa15.29■□□□□ 0.04
PHGDH-231ENST00000641939 ZNF564Q8TBZ8 553 aaPredicted RBP15.29■□□□□ 0.04
PHGDH-231ENST00000641939 CTNNBL1Q8WYA6 563 aaPredicted RBP15.29■□□□□ 0.04
PHGDH-231ENST00000641939 LRIG1Q96JA1 1093 aa15.29■□□□□ 0.04
PHGDH-231ENST00000641939 SLC6A18Q96N87 628 aa15.29■□□□□ 0.04
PHGDH-231ENST00000641939 TRIM5Q9C035 493 aa15.29■□□□□ 0.04
PHGDH-231ENST00000641939 GAREM1Q9H706 876 aa15.29■□□□□ 0.04
PHGDH-231ENST00000641939 CWC15Q9P013 229 aaKnown RBP15.29■□□□□ 0.04
PHGDH-231ENST00000641939 ANKRD6Q9Y2G4 727 aa15.29■□□□□ 0.04
PHGDH-231ENST00000641939 ARHGAP42A6NI28 874 aa15.28■□□□□ 0.04
PHGDH-231ENST00000641939 AKR1B10O60218 316 aa15.28■□□□□ 0.04
PHGDH-231ENST00000641939 H2AFZP0C0S5 128 aa15.28■□□□□ 0.04
PHGDH-231ENST00000641939 CEACAM1P13688 526 aa15.28■□□□□ 0.04
PHGDH-231ENST00000641939 NUDT1P36639 197 aa15.28■□□□□ 0.04
PHGDH-231ENST00000641939 SLC25A11Q02978 314 aaKnown RBP15.28■□□□□ 0.04
PHGDH-231ENST00000641939 DPYSQ14117 519 aa15.28■□□□□ 0.04
PHGDH-231ENST00000641939 DPYSL2Q16555 572 aa15.28■□□□□ 0.04
PHGDH-231ENST00000641939 KIF19Q2TAC6 998 aa15.28■□□□□ 0.04
PHGDH-231ENST00000641939 NEK5Q6P3R8 708 aa15.28■□□□□ 0.04
PHGDH-231ENST00000641939 LAYNQ6UX15 382 aa15.28■□□□□ 0.04
PHGDH-231ENST00000641939 H2AFVQ71UI9 128 aa15.28■□□□□ 0.04
PHGDH-231ENST00000641939 CNGA4Q8IV77 575 aa15.28■□□□□ 0.04
PHGDH-231ENST00000641939 DEFB124Q8NES8 71 aa15.28■□□□□ 0.04
PHGDH-231ENST00000641939 OR6K2Q8NGY2 324 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms