RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 BBS4Q96RK4 519 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 SLC22A4Q9H015 551 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 KIAA1210Q9ULL0 1709 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 ODC1P11926 461 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 CYP11B1P15538 503 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 PHC1P78364 1004 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.26■□□□□ 0.03
UBE3A-227ENST00000638011 SCAF8Q9UPN6 1271 aaKnown RBP15.26■□□□□ 0.03
UBE3A-227ENST00000638011 ALG5Q9Y673 324 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 CSH1P0DML2 217 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 CSH2P0DML3 217 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 MFSD7Q6UXD7 560 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 CHERPQ8IWX8 916 aaKnown RBP15.26■□□□□ 0.03
UBE3A-227ENST00000638011 ZSCAN18Q8TBC5 510 aaPredicted RBP15.26■□□□□ 0.03
UBE3A-227ENST00000638011 LPAR1Q92633 364 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 INTS10Q9NVR2 710 aaKnown RBP15.26■□□□□ 0.03
UBE3A-227ENST00000638011 FAM76BQ5HYJ3 339 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 USP43Q70EL4 1123 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 CMTR2Q8IYT2 770 aaKnown RBP15.26■□□□□ 0.03
UBE3A-227ENST00000638011 CREB3L1Q96BA8 519 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 REXO5Q96IC2 774 aaKnown RBP15.26■□□□□ 0.03
UBE3A-227ENST00000638011 ANKEF1Q9NU02 776 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 NEDD4P46934 1319 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 FAM86C2PA6NEL3 165 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 USP17L5A8MUK1 530 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 USP17L8P0C7I0 530 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 CASP1P29466 404 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 PRKG2Q13237 762 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 DDX39BQ13838 428 aaKnown RBP15.26■□□□□ 0.03
UBE3A-227ENST00000638011 TTMPQ5BVD1 217 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 MPP5Q8N3R9 675 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 KAT5Q92993 513 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 ATP10BO94823 1461 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 KANTRA0A1W2PQU2 76 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 NOTOA8MTQ0 251 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 SEC22BO75396 215 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 PLEKHG6Q3KR16 790 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 UCMAQ8WVF2 138 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 PPP3R2Q96LZ3 170 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 KLHL5Q96PQ7 755 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 EXD2Q9NVH0 621 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 SPATA31E1Q6ZUB1 1445 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 TULP3O75386 442 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 PON1P27169 355 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 NTSP30990 170 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 ZNF662Q6ZS27 426 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 MGME1Q9BQP7 344 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 UGGT1Q9NYU2 1555 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 METP08581 1390 aa15.26■□□□□ 0.03
UBE3A-227ENST00000638011 RNASEH1O60930 286 aaKnown RBP15.25■□□□□ 0.03
UBE3A-227ENST00000638011 ZNF7P17097 686 aaPredicted RBP15.25■□□□□ 0.03
UBE3A-227ENST00000638011 FGFR3P22607 806 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 ARF3P61204 181 aaPredicted RBP15.25■□□□□ 0.03
UBE3A-227ENST00000638011 ARF1P84077 181 aaKnown RBP15.25■□□□□ 0.03
UBE3A-227ENST00000638011 LIN52Q52LA3 116 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 AFTPHQ6ULP2 937 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 MYO5BQ9ULV0 1848 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 INO80Q9ULG1 1556 aaPredicted RBP15.25■□□□□ 0.03
UBE3A-227ENST00000638011 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.25■□□□□ 0.034e-7■□□□□ 10.3
UBE3A-227ENST00000638011 ZNF613Q6PF04 617 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 ZNF621Q6ZSS3 439 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 LZTR1Q8N653 840 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 GTF3C2Q8WUA4 911 aaPredicted RBP15.25■□□□□ 0.03
UBE3A-227ENST00000638011 KCTD4Q8WVF5 259 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 GPATCH1Q9BRR8 931 aaKnown RBP15.25■□□□□ 0.03
UBE3A-227ENST00000638011 DMGDHQ9UI17 866 aaKnown RBP15.25■□□□□ 0.03
UBE3A-227ENST00000638011 RNF17Q9BXT8 1623 aaKnown RBP15.25■□□□□ 0.03
UBE3A-227ENST00000638011 CBX6O95503 412 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 CST1P01037 141 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 PHKG2P15735 406 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 EGFLAMQ63HQ2 1017 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 DNAJC10Q8IXB1 793 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 DIRAS2Q96HU8 199 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 SAMHD1Q9Y3Z3 626 aaKnown RBP15.25■□□□□ 0.03
UBE3A-227ENST00000638011 MAP2K7O14733 419 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 AP5Z1O43299 807 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 STAU1O95793 577 aaKnown RBP15.25■□□□□ 0.03
UBE3A-227ENST00000638011 FTH1P02794 183 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 PTPN3P26045 913 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 FBXO43Q4G163 708 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 CCDC86Q9H6F5 360 aaKnown RBP15.25■□□□□ 0.03
UBE3A-227ENST00000638011 USP17L15C9J2P7 530 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 USP17L13C9JLJ4 530 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 USP17L11C9JVI0 530 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 USP17L18D6R9N7 530 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 USP17L22D6RA61 530 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 USP17L17D6RBQ6 530 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 USP17L19D6RCP7 530 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 USP17L20D6RJB6 530 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 TCEA3O75764 348 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 RPL9P32969 192 aaKnown RBP15.25■□□□□ 0.03
UBE3A-227ENST00000638011 USP17L24Q0WX57 530 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 SWSAP1Q6NVH7 229 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 USP17L6PQ6QN14 398 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 RBM43Q6ZSC3 357 aaKnown RBP15.25■□□□□ 0.03
UBE3A-227ENST00000638011 SIPA1Q96FS4 1042 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 FRMD6Q96NE9 622 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 PLEKHF1Q96S99 279 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 DNAJB4Q9UDY4 337 aa15.25■□□□□ 0.03
UBE3A-227ENST00000638011 ZNF214Q9UL59 606 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms