RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 DEKP35659 375 aaKnown RBP16.26■□□□□ 0.19
CLN6-216ENST00000636876 RENBPP51606 427 aa16.26■□□□□ 0.19
CLN6-216ENST00000636876 IFI35P80217 286 aaPredicted RBP16.26■□□□□ 0.19
CLN6-216ENST00000636876 HNRNPDQ14103 355 aaKnown RBP16.26■□□□□ 0.19
CLN6-216ENST00000636876 ZNF235Q14590 738 aa16.26■□□□□ 0.19
CLN6-216ENST00000636876 SIX1Q15475 284 aaPredicted RBP16.26■□□□□ 0.19
CLN6-216ENST00000636876 MARC1Q5VT66 337 aa16.26■□□□□ 0.19
CLN6-216ENST00000636876 B4GALNT4Q76KP1 1039 aa16.26■□□□□ 0.19
CLN6-216ENST00000636876 PLPP6Q8IY26 295 aa16.26■□□□□ 0.19
CLN6-216ENST00000636876 STK40Q8N2I9 435 aa16.26■□□□□ 0.19
CLN6-216ENST00000636876 BBS5Q8N3I7 341 aa16.26■□□□□ 0.19
CLN6-216ENST00000636876 OR2A12Q8NGT7 310 aa16.26■□□□□ 0.19
CLN6-216ENST00000636876 ERLEC1Q96DZ1 483 aa16.26■□□□□ 0.19
CLN6-216ENST00000636876 MS4A14Q96JA4 679 aa16.26■□□□□ 0.19
CLN6-216ENST00000636876 CCDC114Q96M63 670 aa16.26■□□□□ 0.19
CLN6-216ENST00000636876 PSKH2Q96QS6 385 aa16.26■□□□□ 0.19
CLN6-216ENST00000636876 CINPQ9BW66 212 aaPredicted RBP16.26■□□□□ 0.19
CLN6-216ENST00000636876 FRMD8P1Q9BZ68 369 aaPredicted RBP16.26■□□□□ 0.19
CLN6-216ENST00000636876 POLMQ9NP87 494 aaPredicted RBP16.26■□□□□ 0.19
CLN6-216ENST00000636876 PRMT8Q9NR22 394 aaPredicted RBP16.26■□□□□ 0.19
CLN6-216ENST00000636876 SAR1BQ9Y6B6 198 aa16.26■□□□□ 0.19
CLN6-216ENST00000636876 TCRBV21S2A2A0A5A6 115 aa16.25■□□□□ 0.19
CLN6-216ENST00000636876 KCNK1O00180 336 aa16.25■□□□□ 0.19
CLN6-216ENST00000636876 ZNF185O15231 689 aa16.25■□□□□ 0.19
CLN6-216ENST00000636876 LAMTOR5O43504 91 aa16.25■□□□□ 0.19
CLN6-216ENST00000636876 BNIP3LO60238 219 aa16.25■□□□□ 0.19
CLN6-216ENST00000636876 IGSF6O95976 241 aa16.25■□□□□ 0.19
CLN6-216ENST00000636876 HSPA9P38646 679 aaKnown RBP16.25■□□□□ 0.19
CLN6-216ENST00000636876 MMP13P45452 471 aa16.25■□□□□ 0.19
CLN6-216ENST00000636876 RECQLP46063 649 aaPredicted RBP16.25■□□□□ 0.19
CLN6-216ENST00000636876 SNRPD1P62314 119 aaKnown RBP16.25■□□□□ 0.19
CLN6-216ENST00000636876 ELAVL3Q14576 367 aaKnown RBP16.25■□□□□ 0.19
CLN6-216ENST00000636876 CARD16Q5EG05 197 aa16.25■□□□□ 0.19
CLN6-216ENST00000636876 ATXN7L2Q5T6C5 722 aaPredicted RBP16.25■□□□□ 0.19
CLN6-216ENST00000636876 DPY19L3Q6ZPD9 716 aa16.25■□□□□ 0.19
CLN6-216ENST00000636876 CDKL3Q8IVW4 592 aaPredicted RBP16.25■□□□□ 0.19
CLN6-216ENST00000636876 C1orf210Q8IVY1 113 aa16.25■□□□□ 0.19
CLN6-216ENST00000636876 TSEN2Q8NCE0 465 aaKnown RBP16.25■□□□□ 0.19
CLN6-216ENST00000636876 TSTD1Q8NFU3 115 aa16.25■□□□□ 0.19
CLN6-216ENST00000636876 OR2AP1Q8NGE2 309 aa16.25■□□□□ 0.19
CLN6-216ENST00000636876 OR2T3Q8NH03 318 aa16.25■□□□□ 0.19
CLN6-216ENST00000636876 SLC35B2Q8TB61 432 aa16.25■□□□□ 0.19
CLN6-216ENST00000636876 ACTRT1Q8TDG2 376 aa16.25■□□□□ 0.19
CLN6-216ENST00000636876 ATG4AQ8WYN0 398 aa16.25■□□□□ 0.19
CLN6-216ENST00000636876 OR8D1Q8WZ84 308 aa16.25■□□□□ 0.19
CLN6-216ENST00000636876 ZNF419Q96HQ0 510 aaPredicted RBP16.25■□□□□ 0.19
CLN6-216ENST00000636876 GDAP1L1Q96MZ0 367 aa16.25■□□□□ 0.19
CLN6-216ENST00000636876 HHIPQ96QV1 700 aa16.25■□□□□ 0.19
CLN6-216ENST00000636876 FAM129BQ96TA1 746 aa16.25■□□□□ 0.19
CLN6-216ENST00000636876 NAP1L3Q99457 506 aaPredicted RBP16.25■□□□□ 0.19
CLN6-216ENST00000636876 IL12RB2Q99665 862 aa16.25■□□□□ 0.19
CLN6-216ENST00000636876 AMACRQ9UHK6 382 aa16.25■□□□□ 0.19
CLN6-216ENST00000636876 FARP1Q9Y4F1 1045 aaPredicted RBP16.25■□□□□ 0.19
CLN6-216ENST00000636876 K7ESF4 209 aa16.24■□□□□ 0.19
CLN6-216ENST00000636876 KIF2AO00139 706 aaPredicted RBP16.24■□□□□ 0.19
CLN6-216ENST00000636876 MUSKO15146 869 aa16.24■□□□□ 0.19
CLN6-216ENST00000636876 ALOX15BO15296 676 aa16.24■□□□□ 0.19
CLN6-216ENST00000636876 MTSS1O43312 755 aa16.24■□□□□ 0.19
CLN6-216ENST00000636876 LIASO43766 372 aa16.24■□□□□ 0.19
CLN6-216ENST00000636876 APBB3O95704 486 aa16.24■□□□□ 0.19
CLN6-216ENST00000636876 JCHAINP01591 159 aa16.24■□□□□ 0.19
CLN6-216ENST00000636876 TUBB4AP04350 444 aa16.24■□□□□ 0.19
CLN6-216ENST00000636876 CCNHP51946 323 aaPredicted RBP16.24■□□□□ 0.19
CLN6-216ENST00000636876 COPAP53621 1224 aa16.24■□□□□ 0.19
CLN6-216ENST00000636876 ZBTB17Q13105 803 aa16.24■□□□□ 0.19
CLN6-216ENST00000636876 HEATR6Q6AI08 1181 aaKnown RBP16.24■□□□□ 0.19
CLN6-216ENST00000636876 DARS2Q6PI48 645 aaKnown RBP16.24■□□□□ 0.19
CLN6-216ENST00000636876 PGBD5Q8N414 524 aa16.24■□□□□ 0.19
CLN6-216ENST00000636876 CHST14Q8NCH0 376 aa16.24■□□□□ 0.19
CLN6-216ENST00000636876 C1orf54Q8WWF1 131 aa16.24■□□□□ 0.19
CLN6-216ENST00000636876 EXOC2Q96KP1 924 aa16.24■□□□□ 0.19
CLN6-216ENST00000636876 MGME1Q9BQP7 344 aa16.24■□□□□ 0.19
CLN6-216ENST00000636876 RSPH9Q9H1X1 276 aaPredicted RBP16.24■□□□□ 0.19
CLN6-216ENST00000636876 C10orf88Q9H8K7 445 aa16.24■□□□□ 0.19
CLN6-216ENST00000636876 NT5MQ9NPB1 228 aa16.24■□□□□ 0.19
CLN6-216ENST00000636876 RBM22Q9NW64 420 aaKnown RBP eCLIP16.24■□□□□ 0.19
CLN6-216ENST00000636876 SMARCAL1Q9NZC9 954 aa16.24■□□□□ 0.19
CLN6-216ENST00000636876 SEPT10Q9P0V9 454 aa16.24■□□□□ 0.19
CLN6-216ENST00000636876 HECAQ9UBI9 543 aaPredicted RBP16.24■□□□□ 0.19
CLN6-216ENST00000636876 DNPEPQ9ULA0 475 aa16.24■□□□□ 0.19
CLN6-216ENST00000636876 BCLAF3A2AJT9 711 aaKnown RBP16.23■□□□□ 0.19
CLN6-216ENST00000636876 ZBTB24O43167 697 aaPredicted RBP16.23■□□□□ 0.19
CLN6-216ENST00000636876 RNASEH1O60930 286 aaKnown RBP16.23■□□□□ 0.19
CLN6-216ENST00000636876 ZNF189O75820 626 aaPredicted RBP16.23■□□□□ 0.19
CLN6-216ENST00000636876 NEBLO76041 1014 aa16.23■□□□□ 0.19
CLN6-216ENST00000636876 ALDH1A2O94788 518 aa16.23■□□□□ 0.19
CLN6-216ENST00000636876 GABRG2P18507 467 aa16.23■□□□□ 0.19
CLN6-216ENST00000636876 NDUFV2P19404 249 aa16.23■□□□□ 0.19
CLN6-216ENST00000636876 RBL1P28749 1068 aa16.23■□□□□ 0.19
CLN6-216ENST00000636876 HOXA6P31267 233 aa16.23■□□□□ 0.19
CLN6-216ENST00000636876 RGRP47804 291 aa16.23■□□□□ 0.19
CLN6-216ENST00000636876 CSNK1DP48730 415 aa16.23■□□□□ 0.19
CLN6-216ENST00000636876 NSUN2Q08J23 767 aaKnown RBP eCLIP16.23■□□□□ 0.19
CLN6-216ENST00000636876 WASHC5Q12768 1159 aa16.23■□□□□ 0.19
CLN6-216ENST00000636876 CCNG2Q16589 344 aa16.23■□□□□ 0.19
CLN6-216ENST00000636876 MYLK3Q32MK0 819 aa16.23■□□□□ 0.19
CLN6-216ENST00000636876 ZNF776Q68DI1 518 aaPredicted RBP16.23■□□□□ 0.19
CLN6-216ENST00000636876 DSG4Q86SJ6 1040 aa16.23■□□□□ 0.19
CLN6-216ENST00000636876 MAML2Q8IZL2 1156 aaPredicted RBP16.23■□□□□ 0.19
CLN6-216ENST00000636876 RYBPQ8N488 228 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms