RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 AADATQ8N5Z0 425 aa12.94□□□□□ -0.34
CTSD-208ENST00000636843 OR14C36Q8NHC7 312 aa12.94□□□□□ -0.34
CTSD-208ENST00000636843 ZNF606Q8WXB4 792 aa12.94□□□□□ -0.34
CTSD-208ENST00000636843 RPL10LQ96L21 214 aaKnown RBP12.94□□□□□ -0.34
CTSD-208ENST00000636843 ISCUQ9H1K1 167 aa12.94□□□□□ -0.34
CTSD-208ENST00000636843 KDM4CQ9H3R0 1056 aa12.94□□□□□ -0.34
CTSD-208ENST00000636843 GDF3Q9NR23 364 aa12.94□□□□□ -0.34
CTSD-208ENST00000636843 SEPT11Q9NVA2 429 aaKnown RBP12.94□□□□□ -0.34
CTSD-208ENST00000636843 FASNP49327 2511 aaKnown RBP12.94□□□□□ -0.34
CTSD-208ENST00000636843 ADAMTS20P59510 1910 aa12.94□□□□□ -0.34
CTSD-208ENST00000636843 KCNU1A8MYU2 1149 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 E5RJQ4 531 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 THAP12O43422 761 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 RTN2O75298 545 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 LDOC1O95751 146 aaPredicted RBP12.93□□□□□ -0.34
CTSD-208ENST00000636843 WNT1P04628 370 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 ITGAVP06756 1048 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 GLI1P08151 1106 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 C1SP09871 688 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 ABCB4P21439 1286 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 MZF1P28698 734 aaPredicted RBP12.93□□□□□ -0.34
CTSD-208ENST00000636843 CXCR5P32302 372 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 USP8P40818 1118 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 VASPP50552 380 aaPredicted RBP12.93□□□□□ -0.34
CTSD-208ENST00000636843 ADPRHP54922 357 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 CBX1P83916 185 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 CYP4F3Q08477 520 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 MTA1Q13330 715 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 CCDC157Q569K6 752 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 SLC45A4Q5BKX6 768 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 RABGAP1LQ5R372 815 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 SMYD5Q6GMV2 418 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 HDXQ7Z353 690 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 PEX26Q7Z412 305 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 DSG4Q86SJ6 1040 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 EPS8L1Q8TE68 723 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 SERAC1Q96JX3 654 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 PRMT1Q99873 361 aaKnown RBP12.93□□□□□ -0.34
CTSD-208ENST00000636843 CYTH4Q9UIA0 394 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 A0A1B0GVM2 712 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 TCAF2A6NFQ2 919 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 IL1BP01584 269 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 PDGFRAP16234 1089 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 GNA15P30679 374 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 CCR1P32246 355 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 NUDT1P36639 197 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 ARRB1P49407 418 aaPredicted RBP12.93□□□□□ -0.34
CTSD-208ENST00000636843 STK19P49842 368 aaPredicted RBP12.93□□□□□ -0.34
CTSD-208ENST00000636843 SHBQ15464 509 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 DHRS13Q6UX07 377 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 MARCH9Q86YJ5 346 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 GATAD2AQ86YP4 633 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 OXR1Q8N573 874 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 SLC35G2Q8TBE7 412 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 SAP25Q8TEE9 199 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 PSMB7Q99436 277 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 FUT8Q9BYC5 575 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 ERVMER34-1Q9H9K5 563 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 ASNSD1Q9NWL6 643 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 NOCTQ9UK39 431 aaKnown RBP12.93□□□□□ -0.34
CTSD-208ENST00000636843 AMFRQ9UKV5 643 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 LAMA5O15230 3695 aa12.93□□□□□ -0.34
CTSD-208ENST00000636843 TMEM131Q92545 1883 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 TBC1D3DA0A087WVF3 549 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 TBC1D3IA0A087WXS9 549 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 TBC1D3EA0A087X179 549 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 TBC1D3KA0A087X1G2 549 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 FAM149AA5PLN7 773 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 TBC1D3FA6NER0 549 aaPredicted RBP12.92□□□□□ -0.34
CTSD-208ENST00000636843 TMCO5BA8MYB1 307 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 TBC1D3LB9A6J9 549 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 TLR4O00206 839 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 MAP2K7O14733 419 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 SLC7A4O43246 635 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 LATO43561 262 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 MAGEC1O60732 1142 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 TBC1D3HP0C7X1 549 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 RXRGP48443 463 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 BPIFB4P59827 614 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 PITX1P78337 314 aaPredicted RBP12.92□□□□□ -0.34
CTSD-208ENST00000636843 CDR2Q01850 454 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 PDCLQ13371 301 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 PRAMEF14Q5SWL7 426 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 FAM46CQ5VWP2 391 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 TBC1D3GQ6DHY5 549 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 TBC1D3CQ6IPX1 549 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 NAPEPLDQ6IQ20 393 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.92□□□□□ -0.34
CTSD-208ENST00000636843 DAAM2Q86T65 1068 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 NOP9Q86U38 636 aaKnown RBP12.92□□□□□ -0.34
CTSD-208ENST00000636843 PRPF39Q86UA1 669 aaKnown RBP12.92□□□□□ -0.34
CTSD-208ENST00000636843 NT5DC3Q86UY8 548 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 IQCHQ86VS3 1027 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 ZNF677Q86XU0 584 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 TBC1D3Q8IZP1 549 aaPredicted RBP12.92□□□□□ -0.34
CTSD-208ENST00000636843 MFSD2AQ8NA29 543 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 ACTRT1Q8TDG2 376 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 FRS2Q8WU20 508 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 SLC20A1Q8WUM9 679 aa12.92□□□□□ -0.34
CTSD-208ENST00000636843 OR8D1Q8WZ84 308 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms