RNA–Protein interactions for RNA: ENST00000635886.1

C11orf53-202, Transcript of chromosome 11 open reading frame 53, humanhuman

TSL 5

Gene C11orf53, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf53-202ENST00000635886 SERINC3Q13530 473 aa13.68□□□□□ -0.22
C11orf53-202ENST00000635886 DPYSQ14117 519 aa13.68□□□□□ -0.22
C11orf53-202ENST00000635886 DPYSL2Q16555 572 aa13.68□□□□□ -0.22
C11orf53-202ENST00000635886 PIP5KL1Q5T9C9 394 aa13.68□□□□□ -0.22
C11orf53-202ENST00000635886 H2AFVQ71UI9 128 aa13.68□□□□□ -0.22
C11orf53-202ENST00000635886 GAS2L3Q86XJ1 694 aa13.68□□□□□ -0.22
C11orf53-202ENST00000635886 MINDY1Q8N5J2 469 aa13.68□□□□□ -0.22
C11orf53-202ENST00000635886 NETO2Q8NC67 525 aa13.68□□□□□ -0.22
C11orf53-202ENST00000635886 OR6K2Q8NGY2 324 aa13.68□□□□□ -0.22
C11orf53-202ENST00000635886 CTNNBL1Q8WYA6 563 aaPredicted RBP13.68□□□□□ -0.22
C11orf53-202ENST00000635886 HSPH1Q92598 858 aa13.68□□□□□ -0.22
C11orf53-202ENST00000635886 CCDC42Q96M95 316 aa13.68□□□□□ -0.22
C11orf53-202ENST00000635886 HEPHQ9BQS7 1158 aa13.68□□□□□ -0.22
C11orf53-202ENST00000635886 SLC39A8Q9C0K1 460 aa13.68□□□□□ -0.22
C11orf53-202ENST00000635886 EBF2Q9HAK2 575 aa13.68□□□□□ -0.22
C11orf53-202ENST00000635886 TM9SF3Q9HD45 589 aa13.68□□□□□ -0.22
C11orf53-202ENST00000635886 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.68□□□□□ -0.22
C11orf53-202ENST00000635886 SPTLC3Q9NUV7 552 aa13.68□□□□□ -0.22
C11orf53-202ENST00000635886 DONSONQ9NYP3 566 aa13.68□□□□□ -0.22
C11orf53-202ENST00000635886 UVRAGQ9P2Y5 699 aa13.68□□□□□ -0.22
C11orf53-202ENST00000635886 HECAQ9UBI9 543 aaPredicted RBP13.68□□□□□ -0.22
C11orf53-202ENST00000635886 DCHS1Q96JQ0 3298 aa13.68□□□□□ -0.22
C11orf53-202ENST00000635886 ADAMTS9Q9P2N4 1935 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 TBC1D3DA0A087WVF3 549 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 TBC1D3IA0A087WXS9 549 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 TBC1D3EA0A087X179 549 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 TBC1D3KA0A087X1G2 549 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 A0A1B0GVT2 93 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 A0A1W2PPC4 97 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 TBC1D3FA6NER0 549 aaPredicted RBP13.67□□□□□ -0.22
C11orf53-202ENST00000635886 TBC1D3LB9A6J9 549 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 TMCC1O94876 653 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 GSRP00390 522 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 TMEM253P0C7T8 217 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 TBC1D3HP0C7X1 549 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 GKP32189 559 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 HCAR3P49019 387 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 CSNK1EP49674 416 aaKnown RBP13.67□□□□□ -0.22
C11orf53-202ENST00000635886 CCR5P51681 352 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 ZNF75DP51815 510 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 AFF3P51826 1226 aaKnown RBP13.67□□□□□ -0.22
C11orf53-202ENST00000635886 ZNF135P52742 658 aaPredicted RBP13.67□□□□□ -0.22
C11orf53-202ENST00000635886 NDST2P52849 883 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 TAS2R38P59533 333 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 BNC1Q01954 994 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 AFMIDQ63HM1 303 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 TBC1D3GQ6DHY5 549 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 TBC1D3CQ6IPX1 549 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 LAYNQ6UX15 382 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 CPNE8Q86YQ8 564 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 ARHGAP12Q8IWW6 846 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 PLPP6Q8IY26 295 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 TBC1D3Q8IZP1 549 aaPredicted RBP13.67□□□□□ -0.22
C11orf53-202ENST00000635886 RYBPQ8N488 228 aaPredicted RBP13.67□□□□□ -0.22
C11orf53-202ENST00000635886 NPWQ8N729 165 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 OR2AP1Q8NGE2 309 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 TEKT4Q8WW24 435 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 KDM4CQ9H3R0 1056 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 ZDHHC6Q9H6R6 413 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 OSGEPQ9NPF4 335 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 DYRK4Q9NR20 520 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 CACNA1AO00555 2505 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 CACNA1EQ15878 2313 aa13.67□□□□□ -0.22
C11orf53-202ENST00000635886 H3BRJ5 948 aa13.66□□□□□ -0.22
C11orf53-202ENST00000635886 J3KR12 359 aa13.66□□□□□ -0.22
C11orf53-202ENST00000635886 PROSCO94903 275 aa13.66□□□□□ -0.22
C11orf53-202ENST00000635886 KCNA4P22459 653 aa13.66□□□□□ -0.22
C11orf53-202ENST00000635886 AMPD1P23109 780 aa13.66□□□□□ -0.22
C11orf53-202ENST00000635886 ARL4AP40617 200 aa13.66□□□□□ -0.22
C11orf53-202ENST00000635886 SSR1P43307 286 aaKnown RBP13.66□□□□□ -0.22
C11orf53-202ENST00000635886 PAPOLAP51003 745 aaKnown RBP13.66□□□□□ -0.22
C11orf53-202ENST00000635886 SNRPD1P62314 119 aaKnown RBP13.66□□□□□ -0.22
C11orf53-202ENST00000635886 INO80DQ53TQ3 878 aaPredicted RBP13.66□□□□□ -0.22
C11orf53-202ENST00000635886 PPM1JQ5JR12 505 aa13.66□□□□□ -0.22
C11orf53-202ENST00000635886 ATXN7L2Q5T6C5 722 aaPredicted RBP13.66□□□□□ -0.22
C11orf53-202ENST00000635886 ERN2Q76MJ5 926 aaKnown RBP13.66□□□□□ -0.22
C11orf53-202ENST00000635886 POLNQ7Z5Q5 900 aa13.66□□□□□ -0.22
C11orf53-202ENST00000635886 TC2NQ8N9U0 490 aa13.66□□□□□ -0.22
C11orf53-202ENST00000635886 CASKIN2Q8WXE0 1202 aa13.66□□□□□ -0.22
C11orf53-202ENST00000635886 VOPP1Q96AW1 172 aa13.66□□□□□ -0.22
C11orf53-202ENST00000635886 PPP1R16AQ96I34 528 aa13.66□□□□□ -0.22
C11orf53-202ENST00000635886 SLC6A18Q96N87 628 aa13.66□□□□□ -0.22
C11orf53-202ENST00000635886 CSPG4P5Q96PW8 444 aa13.66□□□□□ -0.22
C11orf53-202ENST00000635886 HDAC8Q9BY41 377 aa13.66□□□□□ -0.22
C11orf53-202ENST00000635886 ZDHHC5Q9C0B5 715 aa13.66□□□□□ -0.22
C11orf53-202ENST00000635886 PDFQ9HBH1 243 aa13.66□□□□□ -0.22
C11orf53-202ENST00000635886 PCDH18Q9HCL0 1135 aa13.66□□□□□ -0.22
C11orf53-202ENST00000635886 MFHAS1Q9Y4C4 1052 aa13.66□□□□□ -0.22
C11orf53-202ENST00000635886 DNAH14Q0VDD8 3507 aa13.66□□□□□ -0.22
C11orf53-202ENST00000635886 MED19A0JLT2 244 aaPredicted RBP13.65□□□□□ -0.22
C11orf53-202ENST00000635886 ARHGAP42A6NI28 874 aa13.65□□□□□ -0.22
C11orf53-202ENST00000635886 DFFAO00273 331 aa13.65□□□□□ -0.22
C11orf53-202ENST00000635886 KRIT1O00522 736 aa13.65□□□□□ -0.22
C11orf53-202ENST00000635886 WNT9AO14904 365 aa13.65□□□□□ -0.22
C11orf53-202ENST00000635886 LATO43561 262 aa13.65□□□□□ -0.22
C11orf53-202ENST00000635886 PRAMEF11O60813 436 aa13.65□□□□□ -0.22
C11orf53-202ENST00000635886 OPHN1O60890 802 aa13.65□□□□□ -0.22
C11orf53-202ENST00000635886 ITGB7P26010 798 aa13.65□□□□□ -0.22
C11orf53-202ENST00000635886 MAT2AP31153 395 aaKnown RBP13.65□□□□□ -0.22
C11orf53-202ENST00000635886 GRIA4P48058 902 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms