RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 DLX2Q07687 328 aaPredicted RBP12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 GRSF1Q12849 480 aaKnown RBP eCLIP12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 CAMK1Q14012 370 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 LRRC14Q15048 493 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 E2F5Q15329 346 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 TANGO2Q6ICL3 276 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 PSTKQ8IV42 348 aaKnown RBP12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 CCDC63Q8NA47 563 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 FBF1Q8TES7 1133 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 GRID1Q9ULK0 1009 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 ATP9BO43861 1147 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 ACADMP11310 421 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 NR2C2P49116 596 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 SESN2P58004 480 aaPredicted RBP12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 XRCC4Q13426 336 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 ADGRE1Q14246 886 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 SMAD1Q15797 465 aaKnown RBP12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 GALNTL6Q49A17 601 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 TDRPQ86YL5 185 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 CCDC110Q8TBZ0 833 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 SPHK2Q9NRA0 654 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 CCT8L1PA6NM43 557 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 KRT37O76014 449 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 CNTN5O94779 1100 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 LUC7L3O95232 432 aaKnown RBP12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 PGFP49763 221 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 WDR4P57081 412 aaKnown RBP12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 GPX6P59796 221 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 TFF2Q03403 129 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 MGAT5Q09328 741 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 TTC39BQ5VTQ0 682 aaPredicted RBP12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 MSANTD2Q6P1R3 559 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 OR6K2Q8NGY2 324 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 PEBP4Q96S96 227 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 PKMYT1Q99640 499 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 GTSE1Q9NYZ3 720 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 SEPT3Q9UH03 358 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 MOSPD1Q9UJG1 213 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 SMG5Q9UPR3 1016 aaKnown RBP12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 ACTL7BQ9Y614 415 aa12.66□□□□□ -0.38
SYNGAP1-207ENST00000628646 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 SOX1O00570 391 aaPredicted RBP12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 RBL1P28749 1068 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 CCR2P41597 374 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 TNK2Q07912 1038 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 MSS51Q4VC12 460 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 TMEM25Q86YD3 366 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 RTL3Q8N8U3 475 aaKnown RBP12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 HTR3CQ8WXA8 447 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 SGSM3Q96HU1 749 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 APOL2Q9BQE5 337 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 MAGEB5Q9BZ81 275 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 MFSD11O43934 449 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 LILRB3O75022 631 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 LAMP2P13473 410 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 FOXN2P32314 431 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 HP1BP3Q5SSJ5 553 aaPredicted RBP12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 KIAA1324Q6UXG2 1013 aaKnown RBP12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 SRRM1Q8IYB3 904 aaKnown RBP12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 MZB1Q8WU39 189 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 ALKBH8Q96BT7 664 aaKnown RBP12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 GRAMD1AQ96CP6 724 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 OTUB2Q96DC9 234 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 CYTH2Q99418 400 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 OSBPL2Q9H1P3 480 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 ZDHHC6Q9H6R6 413 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 CA14Q9ULX7 337 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 NUMBLQ9Y6R0 609 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 ALOX15BO15296 676 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 IGSF6O95976 241 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 EPHX1P07099 455 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 PABPC1P11940 636 aaKnown RBP12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 CSKP41240 450 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 GARSP41250 739 aaKnown RBP12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 PAPOLAP51003 745 aaKnown RBP12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 MAXP61244 160 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 RUNX3Q13761 415 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 DHCR24Q15392 516 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 ANKRD22Q5VYY1 191 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 BBS12Q6ZW61 710 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 NAT8LQ8N9F0 302 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 CMASQ8NFW8 434 aaPredicted RBP12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 ZSWIM3Q96MP5 696 aa12.65□□□□□ -0.38
SYNGAP1-207ENST00000628646 RNF103O00237 685 aa12.65□□□□□ -0.39
SYNGAP1-207ENST00000628646 DNAJC8O75937 253 aaPredicted RBP12.65□□□□□ -0.39
SYNGAP1-207ENST00000628646 CBLBQ13191 982 aa12.65□□□□□ -0.39
SYNGAP1-207ENST00000628646 SMAD4Q13485 552 aaKnown RBP12.65□□□□□ -0.39
SYNGAP1-207ENST00000628646 BIRC2Q13490 618 aa12.65□□□□□ -0.39
SYNGAP1-207ENST00000628646 DPYSL2Q16555 572 aa12.65□□□□□ -0.39
SYNGAP1-207ENST00000628646 SYCE2Q6PIF2 218 aa12.65□□□□□ -0.39
SYNGAP1-207ENST00000628646 TRABD2AQ86V40 505 aa12.65□□□□□ -0.39
SYNGAP1-207ENST00000628646 PCDH19Q8TAB3 1148 aa12.65□□□□□ -0.39
SYNGAP1-207ENST00000628646 MYADMQ96S97 322 aa12.65□□□□□ -0.39
SYNGAP1-207ENST00000628646 DHRS4Q9BTZ2 278 aa12.65□□□□□ -0.39
SYNGAP1-207ENST00000628646 SLC40A1Q9NP59 571 aa12.65□□□□□ -0.39
SYNGAP1-207ENST00000628646 ABCF3Q9NUQ8 709 aa12.65□□□□□ -0.39
SYNGAP1-207ENST00000628646 BFARQ9NZS9 450 aa12.65□□□□□ -0.39
SYNGAP1-207ENST00000628646 IL1BP01584 269 aa12.64□□□□□ -0.39
SYNGAP1-207ENST00000628646 SERPINF2P08697 491 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms