RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 RWDD2BP57060 319 aa20.64■□□□□ 0.89
PTCD3-220ENST00000627371 COPS2P61201 443 aa20.64■□□□□ 0.89
PTCD3-220ENST00000627371 RHOAP61586 193 aa20.64■□□□□ 0.89
PTCD3-220ENST00000627371 CYTH1Q15438 398 aa20.64■□□□□ 0.89
PTCD3-220ENST00000627371 PPP2R5EQ16537 467 aa20.64■□□□□ 0.89
PTCD3-220ENST00000627371 FAM46CQ5VWP2 391 aa20.64■□□□□ 0.89
PTCD3-220ENST00000627371 PRR23BQ6ZRT6 265 aa20.64■□□□□ 0.89
PTCD3-220ENST00000627371 USP30Q70CQ3 517 aa20.64■□□□□ 0.89
PTCD3-220ENST00000627371 CCDC50Q8IVM0 306 aa20.64■□□□□ 0.89
PTCD3-220ENST00000627371 CHST14Q8NCH0 376 aa20.64■□□□□ 0.89
PTCD3-220ENST00000627371 PIP4K2CQ8TBX8 421 aa20.64■□□□□ 0.89
PTCD3-220ENST00000627371 ZC3H10Q96K80 434 aaKnown RBP20.64■□□□□ 0.89
PTCD3-220ENST00000627371 PHOX2BQ99453 314 aa20.64■□□□□ 0.89
PTCD3-220ENST00000627371 DTLQ9NZJ0 730 aa20.64■□□□□ 0.89
PTCD3-220ENST00000627371 LHX3Q9UBR4 397 aa20.64■□□□□ 0.89
PTCD3-220ENST00000627371 IL36AQ9UHA7 158 aa20.64■□□□□ 0.89
PTCD3-220ENST00000627371 SARDHQ9UL12 918 aa20.64■□□□□ 0.89
PTCD3-220ENST00000627371 SMG5Q9UPR3 1016 aaKnown RBP20.64■□□□□ 0.89
PTCD3-220ENST00000627371 hCG_1818297A0A087WSY0 165 aa20.63■□□□□ 0.89
PTCD3-220ENST00000627371 MAP3K6O95382 1288 aa20.63■□□□□ 0.89
PTCD3-220ENST00000627371 PEX11BO96011 259 aa20.63■□□□□ 0.89
PTCD3-220ENST00000627371 PRNPP04156 253 aa20.63■□□□□ 0.89
PTCD3-220ENST00000627371 MX2P20592 715 aa20.63■□□□□ 0.89
PTCD3-220ENST00000627371 CD6P30203 668 aa20.63■□□□□ 0.89
PTCD3-220ENST00000627371 OXTRP30559 389 aa20.63■□□□□ 0.89
PTCD3-220ENST00000627371 SFSWAPQ12872 951 aaKnown RBP20.63■□□□□ 0.89
PTCD3-220ENST00000627371 SLC10A2Q12908 348 aaPredicted RBP20.63■□□□□ 0.89
PTCD3-220ENST00000627371 TFDP2Q14188 446 aa20.63■□□□□ 0.89
PTCD3-220ENST00000627371 PLK5Q496M5 336 aa20.63■□□□□ 0.89
PTCD3-220ENST00000627371 TMCO4Q5TGY1 634 aa20.63■□□□□ 0.89
PTCD3-220ENST00000627371 SLC36A4Q6YBV0 504 aa20.63■□□□□ 0.89
PTCD3-220ENST00000627371 KBTBD6Q86V97 674 aa20.63■□□□□ 0.89
PTCD3-220ENST00000627371 UBL4BQ8N7F7 174 aa20.63■□□□□ 0.89
PTCD3-220ENST00000627371 SUMF1Q8NBK3 374 aa20.63■□□□□ 0.89
PTCD3-220ENST00000627371 TMIEQ8NEW7 156 aa20.63■□□□□ 0.89
PTCD3-220ENST00000627371 UBE2Q2Q8WVN8 375 aa20.63■□□□□ 0.89
PTCD3-220ENST00000627371 ALG3Q92685 438 aa20.63■□□□□ 0.89
PTCD3-220ENST00000627371 NKD2Q969F2 451 aaPredicted RBP20.63■□□□□ 0.89
PTCD3-220ENST00000627371 GDAP1L1Q96MZ0 367 aa20.63■□□□□ 0.89
PTCD3-220ENST00000627371 HEPHQ9BQS7 1158 aa20.63■□□□□ 0.89
PTCD3-220ENST00000627371 PACSIN2Q9UNF0 486 aaPredicted RBP20.63■□□□□ 0.89
PTCD3-220ENST00000627371 WASF2Q9Y6W5 498 aa20.63■□□□□ 0.89
PTCD3-220ENST00000627371 RALGAPA1Q6GYQ0 2036 aa20.63■□□□□ 0.89
PTCD3-220ENST00000627371 IGSF6O95976 241 aa20.62■□□□□ 0.89
PTCD3-220ENST00000627371 KRT10P13645 584 aa20.62■□□□□ 0.89
PTCD3-220ENST00000627371 DYNLT1P63172 113 aa20.62■□□□□ 0.89
PTCD3-220ENST00000627371 LBRQ14739 615 aaKnown RBP20.62■□□□□ 0.89
PTCD3-220ENST00000627371 KAZNQ674X7 775 aa20.62■□□□□ 0.89
PTCD3-220ENST00000627371 TIGD7Q6NT04 549 aaPredicted RBP20.62■□□□□ 0.89
PTCD3-220ENST00000627371 AADATQ8N5Z0 425 aa20.62■□□□□ 0.89
PTCD3-220ENST00000627371 GRIN3AQ8TCU5 1115 aa20.62■□□□□ 0.89
PTCD3-220ENST00000627371 HDAC11Q96DB2 347 aa20.62■□□□□ 0.89
PTCD3-220ENST00000627371 HES6Q96HZ4 224 aa20.62■□□□□ 0.89
PTCD3-220ENST00000627371 ALS2CR12Q96Q35 445 aa20.62■□□□□ 0.89
PTCD3-220ENST00000627371 CINPQ9BW66 212 aaPredicted RBP20.62■□□□□ 0.89
PTCD3-220ENST00000627371 DUSP15Q9H1R2 295 aaPredicted RBP20.62■□□□□ 0.89
PTCD3-220ENST00000627371 FBXL12Q9NXK8 326 aa20.62■□□□□ 0.89
PTCD3-220ENST00000627371 WSB2Q9NYS7 404 aaPredicted RBP20.62■□□□□ 0.89
PTCD3-220ENST00000627371 SEPT3Q9UH03 358 aa20.62■□□□□ 0.89
PTCD3-220ENST00000627371 RAB23Q9ULC3 237 aa20.62■□□□□ 0.89
PTCD3-220ENST00000627371 NCKAP1Q9Y2A7 1128 aa20.62■□□□□ 0.89
PTCD3-220ENST00000627371 HEY1Q9Y5J3 304 aa20.62■□□□□ 0.89
PTCD3-220ENST00000627371 A0A1W2PP55 124 aa20.61■□□□□ 0.89
PTCD3-220ENST00000627371 DDX3YO15523 660 aaKnown RBP20.61■□□□□ 0.89
PTCD3-220ENST00000627371 CST8O60676 142 aa20.61■□□□□ 0.89
PTCD3-220ENST00000627371 LEFTY1O75610 366 aa20.61■□□□□ 0.89
PTCD3-220ENST00000627371 LMNAP02545 664 aaKnown RBP20.61■□□□□ 0.89
PTCD3-220ENST00000627371 TGM2P21980 687 aa20.61■□□□□ 0.89
PTCD3-220ENST00000627371 PTPN7P35236 360 aa20.61■□□□□ 0.89
PTCD3-220ENST00000627371 DRD3P35462 400 aa20.61■□□□□ 0.89
PTCD3-220ENST00000627371 SLC10A7Q0GE19 358 aa20.61■□□□□ 0.89
PTCD3-220ENST00000627371 LLGL1Q15334 1064 aa20.61■□□□□ 0.89
PTCD3-220ENST00000627371 ELF2Q15723 593 aa20.61■□□□□ 0.89
PTCD3-220ENST00000627371 ARSIQ5FYB1 569 aa20.61■□□□□ 0.89
PTCD3-220ENST00000627371 ATXN7L2Q5T6C5 722 aaPredicted RBP20.61■□□□□ 0.89
PTCD3-220ENST00000627371 PMS2CLQ68D20 193 aa20.61■□□□□ 0.89
PTCD3-220ENST00000627371 RYBPQ8N488 228 aaPredicted RBP20.61■□□□□ 0.89
PTCD3-220ENST00000627371 OR6K2Q8NGY2 324 aa20.61■□□□□ 0.89
PTCD3-220ENST00000627371 NSMCE1Q8WV22 266 aa20.61■□□□□ 0.89
PTCD3-220ENST00000627371 FATE1Q969F0 183 aa20.61■□□□□ 0.89
PTCD3-220ENST00000627371 TOE1Q96GM8 510 aaKnown RBP20.61■□□□□ 0.89
PTCD3-220ENST00000627371 LRIG1Q96JA1 1093 aa20.61■□□□□ 0.89
PTCD3-220ENST00000627371 EXOC2Q96KP1 924 aa20.61■□□□□ 0.89
PTCD3-220ENST00000627371 TSGA13Q96PP4 275 aa20.61■□□□□ 0.89
PTCD3-220ENST00000627371 OMDQ99983 421 aa20.61■□□□□ 0.89
PTCD3-220ENST00000627371 ZDHHC6Q9H6R6 413 aa20.61■□□□□ 0.89
PTCD3-220ENST00000627371 SERGEFQ9UGK8 458 aa20.61■□□□□ 0.89
PTCD3-220ENST00000627371 FZD4Q9ULV1 537 aa20.61■□□□□ 0.89
PTCD3-220ENST00000627371 EFR3BQ9Y2G0 817 aa20.61■□□□□ 0.89
PTCD3-220ENST00000627371 OTOGLQ3ZCN5 2332 aa20.6■□□□□ 0.89
PTCD3-220ENST00000627371 MAP3K13O43283 966 aa20.6■□□□□ 0.89
PTCD3-220ENST00000627371 RNASEH2AO75792 299 aaKnown RBP20.6■□□□□ 0.89
PTCD3-220ENST00000627371 RHOBTB1O94844 696 aa20.6■□□□□ 0.89
PTCD3-220ENST00000627371 POP4O95707 220 aaKnown RBP20.6■□□□□ 0.89
PTCD3-220ENST00000627371 CCNCP24863 283 aa20.6■□□□□ 0.89
PTCD3-220ENST00000627371 NR2C2P49116 596 aa20.6■□□□□ 0.89
PTCD3-220ENST00000627371 METAP1P53582 386 aa20.6■□□□□ 0.89
PTCD3-220ENST00000627371 RPL6Q02878 288 aaKnown RBP20.6■□□□□ 0.89
PTCD3-220ENST00000627371 ADCY2Q08462 1091 aa20.6■□□□□ 0.89
PTCD3-220ENST00000627371 LPAL2Q16609 132 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms