RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 PSMD3O43242 534 aa12.14□□□□□ -0.47
TP53-227ENST00000622645 SKAP2O75563 359 aaPredicted RBP12.14□□□□□ -0.47
TP53-227ENST00000622645 DDHD2O94830 711 aa12.14□□□□□ -0.47
TP53-227ENST00000622645 PDHA1P08559 390 aa12.14□□□□□ -0.47
TP53-227ENST00000622645 PAX7P23759 505 aa12.14□□□□□ -0.47
TP53-227ENST00000622645 MPSTP25325 297 aa12.14□□□□□ -0.47
TP53-227ENST00000622645 HOXC13P31276 330 aa12.14□□□□□ -0.47
TP53-227ENST00000622645 GCKP35557 465 aa12.14□□□□□ -0.47
TP53-227ENST00000622645 ARCN1P48444 511 aaKnown RBP12.14□□□□□ -0.47
TP53-227ENST00000622645 PCSK7Q16549 785 aa12.14□□□□□ -0.47
TP53-227ENST00000622645 DDR2Q16832 855 aa12.14□□□□□ -0.47
TP53-227ENST00000622645 TSNAXIP1Q2TAA8 658 aa12.14□□□□□ -0.47
TP53-227ENST00000622645 TRMT5Q32P41 509 aaKnown RBP12.14□□□□□ -0.47
TP53-227ENST00000622645 NOMO2Q5JPE7 1267 aa12.14□□□□□ -0.47
TP53-227ENST00000622645 ANO7Q6IWH7 933 aa12.14□□□□□ -0.47
TP53-227ENST00000622645 CEP97Q8IW35 865 aa12.14□□□□□ -0.47
TP53-227ENST00000622645 CENPLQ8N0S6 344 aaPredicted RBP12.14□□□□□ -0.47
TP53-227ENST00000622645 SCYL1Q96KG9 808 aa12.14□□□□□ -0.47
TP53-227ENST00000622645 OR52B2Q96RD2 323 aa12.14□□□□□ -0.47
TP53-227ENST00000622645 FSD1LQ9BXM9 530 aa12.14□□□□□ -0.47
TP53-227ENST00000622645 FAM96AQ9H5X1 160 aa12.14□□□□□ -0.47
TP53-227ENST00000622645 WDR55Q9H6Y2 383 aaPredicted RBP12.14□□□□□ -0.47
TP53-227ENST00000622645 CYP4F11Q9HBI6 524 aa12.14□□□□□ -0.47
TP53-227ENST00000622645 BATF3Q9NR55 127 aa12.14□□□□□ -0.47
TP53-227ENST00000622645 NOD1Q9Y239 953 aa12.14□□□□□ -0.47
TP53-227ENST00000622645 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.14□□□□□ -0.47
TP53-227ENST00000622645 CCND3P30281 292 aaPredicted RBP12.14□□□□□ -0.47
TP53-227ENST00000622645 ADRA1AP35348 466 aa12.14□□□□□ -0.47
TP53-227ENST00000622645 GRIA4P48058 902 aa12.14□□□□□ -0.47
TP53-227ENST00000622645 NAGLUP54802 743 aa12.14□□□□□ -0.47
TP53-227ENST00000622645 TFAP2DQ7Z6R9 452 aa12.14□□□□□ -0.47
TP53-227ENST00000622645 ZNF598Q86UK7 904 aaKnown RBP12.14□□□□□ -0.47
TP53-227ENST00000622645 FSTL5Q8N475 847 aaPredicted RBP12.14□□□□□ -0.47
TP53-227ENST00000622645 LZTR1Q8N653 840 aa12.14□□□□□ -0.47
TP53-227ENST00000622645 PNPLA1Q8N8W4 532 aa12.14□□□□□ -0.47
TP53-227ENST00000622645 MRGPRX2Q96LB1 330 aa12.14□□□□□ -0.47
TP53-227ENST00000622645 TRPV6Q9H1D0 765 aa12.14□□□□□ -0.47
TP53-227ENST00000622645 KCNU1A8MYU2 1149 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 TMEM114B3SHH9 223 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 NEMP1O14524 444 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 PDE5AO76074 875 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 MYL4P12829 197 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 DNAJB2P25686 324 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 EPHB1P54762 984 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 SEPT6Q14141 434 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 ARL13AQ5H913 290 aaPredicted RBP12.13□□□□□ -0.47
TP53-227ENST00000622645 C6orf163Q5TEZ5 329 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 FRMD7Q6ZUT3 714 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 EFCAB3Q8N7B9 438 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 RTL3Q8N8U3 475 aaKnown RBP12.13□□□□□ -0.47
TP53-227ENST00000622645 PPHLN1Q8NEY8 458 aaKnown RBP12.13□□□□□ -0.47
TP53-227ENST00000622645 GPR152Q8TDT2 470 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 MICAL1Q8TDZ2 1067 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 TTC1Q99614 292 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 OMDQ99983 421 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 OSBPL1AQ9BXW6 950 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 ILKAPQ9H0C8 392 aaPredicted RBP12.13□□□□□ -0.47
TP53-227ENST00000622645 NSMCE4AQ9NXX6 385 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 IPO11Q9UI26 975 aaKnown RBP12.13□□□□□ -0.47
TP53-227ENST00000622645 TCAF1Q9Y4C2 921 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 COL4A4P53420 1690 aaPredicted RBP12.13□□□□□ -0.47
TP53-227ENST00000622645 AURKAO14965 403 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 NEBLO76041 1014 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 UPP2O95045 317 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 LUC7L3O95232 432 aaKnown RBP12.13□□□□□ -0.47
TP53-227ENST00000622645 ACADSP16219 412 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 GRK4P32298 578 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 HADHAP40939 763 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 SLC1A2P43004 574 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 NUMBP49757 651 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 GEMP55040 296 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 MLLT6P55198 1093 aaPredicted RBP12.13□□□□□ -0.47
TP53-227ENST00000622645 PRKCZQ05513 592 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 SLC12A1Q13621 1099 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 BLMHQ13867 455 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 PIK3R6Q5UE93 754 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 ZNF280DQ6N043 979 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 RANBP10Q6VN20 620 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 ZYG11AQ6WRX3 759 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 RTN4RL1Q86UN2 441 aaPredicted RBP12.13□□□□□ -0.47
TP53-227ENST00000622645 SREK1Q8WXA9 508 aaKnown RBP12.13□□□□□ -0.47
TP53-227ENST00000622645 NXNL1Q96CM4 212 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 CCDC124Q96CT7 223 aaKnown RBP12.13□□□□□ -0.47
TP53-227ENST00000622645 UROC1Q96N76 676 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 NOL6Q9H6R4 1146 aaKnown RBP12.13□□□□□ -0.47
TP53-227ENST00000622645 XPR1Q9UBH6 696 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 PRG3Q9Y2Y8 225 aaPredicted RBP12.13□□□□□ -0.47
TP53-227ENST00000622645 ACOT9Q9Y305 439 aa12.13□□□□□ -0.47
TP53-227ENST00000622645 FAM95CA0A1B0GW59 222 aa12.12□□□□□ -0.47
TP53-227ENST00000622645 PIGNO95427 931 aa12.12□□□□□ -0.47
TP53-227ENST00000622645 TYMPP19971 482 aa12.12□□□□□ -0.47
TP53-227ENST00000622645 EPHA3P29320 983 aa12.12□□□□□ -0.47
TP53-227ENST00000622645 MAXP61244 160 aa12.12□□□□□ -0.47
TP53-227ENST00000622645 USP46P62068 366 aa12.12□□□□□ -0.47
TP53-227ENST00000622645 DLG1Q12959 904 aa12.12□□□□□ -0.47
TP53-227ENST00000622645 LIPMQ5VYY2 423 aa12.12□□□□□ -0.47
TP53-227ENST00000622645 ZNF470Q6ECI4 717 aa12.12□□□□□ -0.47
TP53-227ENST00000622645 POTEHQ6S545 545 aa12.12□□□□□ -0.47
TP53-227ENST00000622645 MYLK4Q86YV6 388 aaPredicted RBP12.12□□□□□ -0.47
TP53-227ENST00000622645 CNTN4Q8IWV2 1026 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms