RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 ANO7Q6IWH7 933 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 PLD5Q8N7P1 536 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 CLPTM1LQ96KA5 538 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 KLHL5Q96PQ7 755 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 EMILIN2Q9BXX0 1053 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 AASDHPPTQ9NRN7 309 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 TUBGCP4Q9UGJ1 667 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 FETUBQ9UGM5 382 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 LNPEPQ9UIQ6 1025 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 ITGA11Q9UKX5 1188 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 DPPA5A6NC42 116 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 SOWAHBA6NEL2 793 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 PHGDHO43175 533 aaKnown RBP8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 B4GALT4O60513 344 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 SPAG6O75602 509 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 PCNAP12004 261 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 CTPS1P17812 591 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 MGAT1P26572 445 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 TUFMP49411 452 aaKnown RBP8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 THOP1P52888 689 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 PFKPQ01813 784 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 DMC1Q14565 340 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 TRMT10BQ6PF06 316 aaKnown RBP8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 NECAB2Q7Z6G3 386 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 CSGALNACT1Q8TDX6 532 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 MCRS1Q96EZ8 462 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 DHRS4Q9BTZ2 278 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 ZFYVE1Q9HBF4 777 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 ETNK2Q9NVF9 386 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 ARHGAP26Q9UNA1 814 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 CACNA1EQ15878 2313 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 SDR42E2A6NKP2 422 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 E7ENQ6 273 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 RNF103O00237 685 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 CHADO15335 359 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 AKAP10O43572 662 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 XYLBO75191 536 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 DARSP14868 501 aaKnown RBP8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 ITGALP20701 1170 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 GPD2P43304 727 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 GSSP48637 474 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 NEK3P51956 506 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 KCNJ11Q14654 390 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 SNAP47Q5SQN1 464 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 LRRC74BQ6ZQY2 392 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 VN1R5Q7Z5H4 357 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 BBS2Q9BXC9 721 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 WWP1Q9H0M0 922 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 RSPH9Q9H1X1 276 aaPredicted RBP8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 ZMYM5Q9UJ78 669 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 CORO1CQ9ULV4 474 aaPredicted RBP8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 FAM32AQ9Y421 112 aaKnown RBP8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 LRRC42Q9Y546 428 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 IPPQ9Y573 584 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 N6AMT1Q9Y5N5 214 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 AKAP6Q13023 2319 aa8.39□□□□□ -1.07
PTPDC1-204ENST00000620992 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 MEI4A8MW99 385 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 TRAFD1O14545 582 aaPredicted RBP8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 TLR5O60602 858 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 CILPO75339 1184 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 PSMG1O95456 288 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 INHAP05111 366 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 GJA1P17302 382 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 SERPINB5P36952 375 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 TLE2Q04725 743 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 MPP3Q13368 585 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 PSMD5Q16401 504 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 CA9Q16790 459 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 CCDC142Q17RM4 750 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 TSHZ1Q6ZSZ6 1077 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 MILR1Q7Z6M3 343 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 SPATA6LQ8N4H0 392 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 ZNF276Q8N554 614 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 C2orf73Q8N5S3 287 aaPredicted RBP8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 CCDC3Q9BQI4 270 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 ADNPQ9H2P0 1102 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 FBXO44Q9H4M3 255 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 KCNK13Q9HB14 408 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 DSEQ9UL01 958 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 KIAA1257Q9ULG3 409 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 ADAMTS5Q9UNA0 930 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 WASF2Q9Y6W5 498 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 SVILO95425 2214 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 PCNTO95613 3336 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 WDR81Q562E7 1941 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 IGKV6D-21A0A0A0MT36 114 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 E9PBE3 544 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 CCNT2O60583 730 aaKnown RBP8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 KLHL41O60662 606 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 TBX10O75333 385 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 CPSF4O95639 269 aaKnown RBP8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 CSH1P0DML2 217 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 CSH2P0DML3 217 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 POU1F1P28069 291 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 ETV4P43268 484 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 MRPS35P82673 323 aaKnown RBP8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 ANKS3Q6ZW76 656 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 ITIH5Q86UX2 942 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 B4GALNT2Q8NHY0 566 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms