RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 ZNF286BP0CG31 522 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 AKR1A1P14550 325 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 INSRRP14616 1297 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 TGM2P21980 687 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 NR4A1P22736 598 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 CDH5P33151 784 aaPredicted RBP7.05□□□□□ -1.28
NEDD9-216ENST00000620854 GP5P40197 560 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 YAP1P46937 504 aaKnown RBP7.05□□□□□ -1.28
NEDD9-216ENST00000620854 XIAPP98170 497 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 CAPRIN1Q14444 709 aaKnown RBP7.05□□□□□ -1.28
NEDD9-216ENST00000620854 OGFOD2Q6N063 350 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 UTS2BQ765I0 119 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 ZNF554Q86TJ5 538 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 SHCBP1Q8NEM2 672 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 KCTD4Q8WVF5 259 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 FBXL8Q96CD0 374 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 CERS2Q96G23 380 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 P2RY11Q96G91 374 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 RBM38Q9H0Z9 239 aaKnown RBP7.05□□□□□ -1.28
NEDD9-216ENST00000620854 LHX5Q9H2C1 402 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 FAM96AQ9H5X1 160 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 SOX17Q9H6I2 414 aaPredicted RBP7.05□□□□□ -1.28
NEDD9-216ENST00000620854 TRPC7Q9HCX4 862 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 EGFL7Q9UHF1 273 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 RAB26Q9ULW5 256 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 PCDHB12Q9Y5F1 795 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.05□□□□□ -1.28
NEDD9-216ENST00000620854 BCLAF3A2AJT9 711 aaKnown RBP7.05□□□□□ -1.28
NEDD9-216ENST00000620854 E7ENX8 843 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 GPR25O00155 361 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 CCDC166P0CW27 439 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 PAMP19021 973 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 RPL14P50914 215 aaKnown RBP7.05□□□□□ -1.28
NEDD9-216ENST00000620854 PCSK7Q16549 785 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 DCAF6Q58WW2 860 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 C6orf10Q5SRN2 563 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 GPR107Q5VW38 600 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 IQSEC1Q6DN90 963 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 ZNF280DQ6N043 979 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 GPR142Q7Z601 462 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 TLK2Q86UE8 772 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 OFCC1Q8IZS5 231 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 AHI1Q8N157 1196 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 TTC39CQ8N584 583 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 OR9I1Q8NGQ6 314 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 URGCPQ8TCY9 931 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 CYGBQ8WWM9 190 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 ARNTL2Q8WYA1 636 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 LRRC39Q96DD0 335 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 RMND5BQ96G75 393 aaPredicted RBP7.05□□□□□ -1.28
NEDD9-216ENST00000620854 ZNF560Q96MR9 790 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 ACE2Q9BYF1 805 aaPredicted RBP7.05□□□□□ -1.28
NEDD9-216ENST00000620854 PIF1Q9H611 641 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 PTPRHQ9HD43 1115 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 SELENONQ9NZV5 590 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 CNTNAP1P78357 1384 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 HDAC3O15379 428 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 GFAPP14136 432 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 CSE1LP55060 971 aaKnown RBP7.05□□□□□ -1.28
NEDD9-216ENST00000620854 TPI1P60174 286 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 PITX1P78337 314 aaPredicted RBP7.05□□□□□ -1.28
NEDD9-216ENST00000620854 DAB2P98082 770 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 PDK2Q15119 407 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 NEDD8Q15843 81 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 FAM110CQ1W6H9 321 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 KIZQ2M2Z5 673 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 ANO4Q32M45 955 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 AGKQ53H12 422 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 PIGGQ5H8A4 983 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 SPRYD7Q5W111 196 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 HERC6Q8IVU3 1022 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 PCSK9Q8NBP7 692 aaKnown RBP7.05□□□□□ -1.28
NEDD9-216ENST00000620854 REPS2Q8NFH8 660 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 ADCY4Q8NFM4 1077 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 DDI1Q8WTU0 396 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 LPGAT1Q92604 370 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 CSPG4P5Q96PW8 444 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 HAUS8Q9BT25 410 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 TMEM106CQ9BVX2 250 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 PRDM12Q9H4Q4 367 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 HACD3Q9P035 362 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 PAIP2BQ9ULR5 123 aaKnown RBP7.05□□□□□ -1.28
NEDD9-216ENST00000620854 MYRFQ9Y2G1 1151 aa7.05□□□□□ -1.28
NEDD9-216ENST00000620854 COL5A3P25940 1745 aaPredicted RBP7.04□□□□□ -1.28
NEDD9-216ENST00000620854 TMEM88BA6NKF7 163 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 CILPO75339 1184 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 STAG3L1P0CL83 205 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 STMN1P16949 149 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 YBX3P16989 372 aaKnown RBP eCLIP7.04□□□□□ -1.28
NEDD9-216ENST00000620854 SPRP35270 261 aaPredicted RBP7.04□□□□□ -1.28
NEDD9-216ENST00000620854 HADHAP40939 763 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 GRIA3P42263 894 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 PLIN5Q00G26 463 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 CTBP1Q13363 440 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 MPP3Q13368 585 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 TMEM132DQ14C87 1099 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 LDLRAP1Q5SW96 308 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 NOTUMQ6P988 496 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 PHF21BQ96EK2 531 aa7.04□□□□□ -1.28
NEDD9-216ENST00000620854 ZBED2Q9BTP6 218 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms