RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 DPEP3Q9H4B8 488 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 MRPL40Q9NQ50 206 aaKnown RBP7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 TCF7L2Q9NQB0 619 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 ANLNQ9NQW6 1124 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 SMYD2Q9NRG4 433 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 PNPOQ9NVS9 261 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 WBP1LQ9NX94 342 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 ATP11BQ9Y2G3 1177 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 TTC36A6NLP5 189 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 UGT1A9O60656 530 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 ZNF623O75123 536 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 KATNA1O75449 491 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 MYCLP1P12525 358 aaPredicted RBP7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 ZNF143P52747 638 aaPredicted RBP7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 RPL26P61254 145 aaKnown RBP7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 STILQ15468 1287 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 TRIM71Q2Q1W2 868 aaKnown RBP7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 CMASQ8NFW8 434 aaPredicted RBP7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 URGCPQ8TCY9 931 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 TMA16Q96EY4 203 aaKnown RBP7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 SCLYQ96I15 445 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 PPP1R10Q96QC0 940 aaKnown RBP7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 ILKAPQ9H0C8 392 aaPredicted RBP7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 LHX5Q9H2C1 402 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 UGT1A7Q9HAW7 530 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 UGT1A10Q9HAW8 530 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 UGT1A8Q9HAW9 530 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 POPDC2Q9HBU9 364 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 PREBQ9HCU5 417 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 DNAJC28Q9NX36 388 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 DMTF1Q9Y222 760 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 PRG3Q9Y2Y8 225 aaPredicted RBP7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 PCDHA11Q9Y5I1 949 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 AP4B1Q9Y6B7 739 aa7.1□□□□□ -1.27
SRGAP3-213ENST00000618999 WDR27A2RRH5 827 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 RFPL1O75677 317 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 PENKP01210 267 aaPredicted RBP7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 ASLP04424 464 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 POLBP06746 335 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 CCDC130P13994 396 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 TCN1P20061 433 aaPredicted RBP7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 PRKCHP24723 683 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 SPRP35270 261 aaPredicted RBP7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 OR1G1P47890 313 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 TLE2Q04725 743 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 PPIDQ08752 370 aaKnown RBP7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 INCA1Q0VD86 236 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 XKR4Q5GH76 650 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 TRMT10BQ6PF06 316 aaKnown RBP7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 C14orf80Q86SX3 495 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 UNC93AQ86WB7 457 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 METTL23Q86XA0 190 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 SNX32Q86XE0 403 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 C10orf107Q8IVU9 208 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 WDTC1Q8N5D0 677 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 SNRNP27Q8WVK2 155 aaKnown RBP7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 SEPT8Q92599 483 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 PPP1R14AQ96A00 147 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 CDRT15Q96T59 188 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 ARPC5LQ9BPX5 153 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 PAAF1Q9BRP4 392 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 NAT9Q9BTE0 207 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 COPS7BQ9H9Q2 264 aaPredicted RBP7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 TJP2Q9UDY2 1190 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 PACSIN3Q9UKS6 424 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 PPT2Q9UMR5 302 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 PLA2G4CQ9UP65 541 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 XPO1O14980 1071 aaKnown RBP7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 ERBB2P04626 1255 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 ATF4P18848 351 aaPredicted RBP7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 IGFBP6P24592 240 aaPredicted RBP7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 BRCC3P46736 316 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 NR1H2P55055 460 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 C15orf59Q2T9L4 293 aaPredicted RBP7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 CCDC153Q494R4 210 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 XYLT1Q86Y38 959 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 ZNF276Q8N554 614 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 TDRD5Q8NAT2 981 aaKnown RBP7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 MCUQ8NE86 351 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 SLC2A14Q8TDB8 520 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 HIPK3Q9H422 1215 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 MKS1Q9NXB0 559 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 BFARQ9NZS9 450 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 PRPF19Q9UMS4 504 aaKnown RBP7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 PCDHB7Q9Y5E2 793 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 BRCA2P51587 3418 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 PLIN3O60664 434 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 GPC4O75487 556 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 LRPAP1P30533 357 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 IDH3AP50213 366 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 MRPS5P82675 430 aaKnown RBP7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 USP4Q13107 963 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 TUSC3Q13454 348 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 PEX6Q13608 980 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 MBTPS1Q14703 1052 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 FAM26DQ5JW98 314 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 SEL1L3Q68CR1 1132 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 LCLAT1Q6UWP7 414 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 PLD5Q8N7P1 536 aa7.09□□□□□ -1.27
SRGAP3-213ENST00000618999 KLHL23Q8NBE8 558 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms